BLASTX nr result

ID: Coptis21_contig00015461 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015461
         (1220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526570.1| brca1 associated ring domain, putative [Rici...   360   3e-97
ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...   355   2e-95
ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...   350   5e-94
ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBIL...   347   5e-93
ref|XP_002303120.1| predicted protein [Populus trichocarpa] gi|2...   338   2e-90

>ref|XP_002526570.1| brca1 associated ring domain, putative [Ricinus communis]
            gi|223534131|gb|EEF35848.1| brca1 associated ring domain,
            putative [Ricinus communis]
          Length = 744

 Score =  360 bits (925), Expect = 3e-97
 Identities = 183/349 (52%), Positives = 244/349 (69%), Gaps = 3/349 (0%)
 Frame = -2

Query: 1219 HVHRRCVDWAPQVFFKEGTDNLVNLDAELARAAKLKCSKCRVKGAALGCFIGSCKKTYHV 1040
            HVHR C++WAPQV+F + T  + NL AELAR +KLKCSKC +KGAALGCF  SC+++YHV
Sbjct: 386  HVHRICIEWAPQVYFVDET--VKNLKAELARGSKLKCSKCGLKGAALGCFQKSCRRSYHV 443

Query: 1039 PCAVYIDDCRWDAEDGLMLCPTHSLQKFPRERSTSEKKHG-NNYHSTTKIAIQQPDKVWA 863
             CA+ I  CRWD ++ L+LCP+HS  +FP E+ +  KKH    +H  T++  QQP+  WA
Sbjct: 444  TCAMEIAGCRWDYDNFLVLCPSHSSVRFPDEKKSKSKKHSLERHHVPTQVPPQQPN-FWA 502

Query: 862  ASPGTTKEWVICGSSLSSAEKNFLAKFAKITGATVSKDWNPKVTHVIAQTDEKGAFSRTQ 683
             S    KEWV CGS+LSS EK+ L +F ++ G  V+K W P VTHVIA TD KGA +RT 
Sbjct: 503  ESATGAKEWVFCGSALSSEEKSLLIEFGRMIGVPVTKFWQPNVTHVIAATDTKGACTRTL 562

Query: 682  KALMAILNGSWILKIDWIKACMEAMNPVNEEPYEVSIDVHGCQDGPKNGRERVMEKAPKL 503
            K LMAILNG W+L IDW+KACM +M+ V+EEPYEVS+D HGC  GP+ GR  V++ APKL
Sbjct: 563  KVLMAILNGRWVLTIDWVKACMRSMHYVDEEPYEVSLDNHGCHSGPRTGRLSVLDNAPKL 622

Query: 502  FNGLHIHLHGDFEQKYKGILEQLVEAAGGTLV-TEDMLTSQSRDLEAESSTRLVVYSLEL 326
            F+GL+ +  GDF   YK  L+ LV AAGGT++ +++ +  QS + EA  S  LVVY+ + 
Sbjct: 623  FSGLNFYFAGDFVSGYKEDLQNLVLAAGGTILDSKEKVVEQSHN-EATPSRTLVVYNFDP 681

Query: 325  PPEPQT-DDLIFMKQRYEQAEKLANETRSWVLGHTWILESIAACKLQPF 182
            P   +  +++  + QR  +AE LA +  S V+ HTW+LESIA+ K QPF
Sbjct: 682  PLGCKLGEEVTILWQRLSEAEDLAAKIGSQVIAHTWLLESIASYKFQPF 730


>ref|XP_003520608.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Glycine
            max]
          Length = 678

 Score =  355 bits (910), Expect = 2e-95
 Identities = 186/348 (53%), Positives = 232/348 (66%), Gaps = 3/348 (0%)
 Frame = -2

Query: 1216 VHRRCVDWAPQVFFKEGTDNLVNLDAELARAAKLKCSKCRVKGAALGCFIGSCKKTYHVP 1037
            VHR C+DWAPQV+F    + + NL AE+AR AKLKCSKC +KGAALGC++ SC++TYHVP
Sbjct: 334  VHRICIDWAPQVYFDG--EVVKNLKAEVARGAKLKCSKCNLKGAALGCYVKSCRRTYHVP 391

Query: 1036 CAVYIDDCRWDAEDGLMLCPTHSLQKFPRERSTSEKKHGNNYHSTTKIAIQQPDKVWAAS 857
            CA+ I DCRWD ED L+LCP HS  KFP E+  S KK     H T             AS
Sbjct: 392  CAMDISDCRWDHEDFLLLCPVHSNVKFPCEKIRS-KKQATQKHPTLSHLPSHHSNPLEAS 450

Query: 856  PGTTKEWVICGSSLSSAEKNFLAKFAKITGATVSKDWNPKVTHVIAQTDEKGAFSRTQKA 677
                 + V CGS+LS+ EK  L  +A   GATV+K W   VTHVIA TD  GA SRT K 
Sbjct: 451  HDDDVKLVFCGSALSNEEKVLLINYASKVGATVTKFWTSNVTHVIAATDAHGACSRTLKV 510

Query: 676  LMAILNGSWILKIDWIKACMEAMNPVNEEPYEVSIDVHGCQDGPKNGRERVMEKAPKLFN 497
            LMAILNG W+LK+DWIKACME +NPV EEPYE+++D  GCQ GPK GR R +   PKLFN
Sbjct: 511  LMAILNGRWVLKMDWIKACMEEVNPVEEEPYEINLDNQGCQGGPKAGRLRALANEPKLFN 570

Query: 496  GLHIHLHGDFEQKYKGILEQLVEAAGGTLV-TEDMLTSQSRDLEAESSTRLVVYSLELPP 320
            GL  +  GD+   YK  LE+L+E  GGT++ +++ L SQ  + + +SS  L+VY+L+ PP
Sbjct: 571  GLKFYFSGDYVSTYKEDLEELIEVGGGTVLRSKEELESQRHECKGDSSQLLIVYNLD-PP 629

Query: 319  E--PQTDDLIFMKQRYEQAEKLANETRSWVLGHTWILESIAACKLQPF 182
            +     +++  + QR   AE LA  T   V+GHTWILESIAACKLQPF
Sbjct: 630  QGCKLGEEVSILWQRLNDAEDLAANTLQ-VIGHTWILESIAACKLQPF 676


>ref|XP_004163582.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
            sativus]
          Length = 679

 Score =  350 bits (897), Expect = 5e-94
 Identities = 172/350 (49%), Positives = 241/350 (68%), Gaps = 1/350 (0%)
 Frame = -2

Query: 1219 HVHRRCVDWAPQVFFKEGTDNLVNLDAELARAAKLKCSKCRVKGAALGCFIGSCKKTYHV 1040
            HVH+ CV+WAPQ +F+   D++ NL AE+AR +KLKCSKC +KGAALGC++ SC+K+YHV
Sbjct: 334  HVHKLCVEWAPQAYFQG--DDVHNLKAEVARGSKLKCSKCGLKGAALGCYLRSCQKSYHV 391

Query: 1039 PCAVYIDDCRWDAEDGLMLCPTHSLQKFPRERSTSEKKHGNNYHSTTKIAIQQPDKVWAA 860
            PCA+ ID+CRWD ++ L+LCP+H+  +FP ERS   K + + ++  +    Q+    WA+
Sbjct: 392  PCALEIDECRWDMDNFLVLCPSHTSARFPDERSKPRKNNFDVFNIVSS-RNQKDLSNWAS 450

Query: 859  SPGTTKEWVICGSSLSSAEKNFLAKFAKITGATVSKDWNPKVTHVIAQTDEKGAFSRTQK 680
            +     +W  CGS+LS+ E+N L KFAK+TGATVSK W P VTHVIA TDE GA +RT K
Sbjct: 451  ASDGVNKWTFCGSALSAEERNILVKFAKLTGATVSKLWKPDVTHVIASTDENGACTRTYK 510

Query: 679  ALMAILNGSWILKIDWIKACMEAMNPVNEEPYEVSIDVHGCQDGPKNGRERVMEKAPKLF 500
             LM ILNG WIL +DW+K CM+   P+NEE YE+++D +GC DGPK GR RV+ K PKLF
Sbjct: 511  VLMGILNGIWILNMDWVKDCMKEKCPLNEEAYEIALDNYGCTDGPKTGRLRVLNKEPKLF 570

Query: 499  NGLHIHLHGDFEQKYKGILEQLVEAAGGTLVTEDMLTSQSRDLEAESSTRLVVYSLELPP 320
             GL  +  GDF   Y+  L+ LV  AGGT++ ++ L + S + +A     +VVY+L+ P 
Sbjct: 571  IGLSFYFTGDFPPAYEEDLQDLVITAGGTVLEDEELAATSSNDQAAPKV-VVVYNLDSPG 629

Query: 319  EPQT-DDLIFMKQRYEQAEKLANETRSWVLGHTWILESIAACKLQPFSCC 173
              +  +++  + QR  +AE +A +  + V+GHTW++ESIA   LQPF  C
Sbjct: 630  GCKVGEEVSILWQRMNEAEGIAAKVGAQVIGHTWLVESIAMGSLQPFVSC 679


>ref|XP_004151994.1| PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Cucumis
            sativus]
          Length = 679

 Score =  347 bits (889), Expect = 5e-93
 Identities = 171/350 (48%), Positives = 240/350 (68%), Gaps = 1/350 (0%)
 Frame = -2

Query: 1219 HVHRRCVDWAPQVFFKEGTDNLVNLDAELARAAKLKCSKCRVKGAALGCFIGSCKKTYHV 1040
            HVH+ CV+WAPQ +F+   D++ NL AE+AR +KLKCSKC +KGAALGC++ SC+K+YHV
Sbjct: 334  HVHKLCVEWAPQAYFQG--DDVHNLKAEVARGSKLKCSKCGLKGAALGCYLRSCQKSYHV 391

Query: 1039 PCAVYIDDCRWDAEDGLMLCPTHSLQKFPRERSTSEKKHGNNYHSTTKIAIQQPDKVWAA 860
            PCA+ ID+CRWD ++ L+LCP+H+  +FP ERS   K + + ++  +    Q+    WA+
Sbjct: 392  PCALEIDECRWDMDNFLVLCPSHTSARFPDERSKPRKNNFDVFNIVSS-RNQKDLSNWAS 450

Query: 859  SPGTTKEWVICGSSLSSAEKNFLAKFAKITGATVSKDWNPKVTHVIAQTDEKGAFSRTQK 680
            +     +W  CGS+LS+ E+N L KFAK+TGATVSK W P VTHVIA TDE GA +RT K
Sbjct: 451  ASDGVNKWTFCGSALSAEERNILVKFAKLTGATVSKLWKPDVTHVIASTDENGACTRTYK 510

Query: 679  ALMAILNGSWILKIDWIKACMEAMNPVNEEPYEVSIDVHGCQDGPKNGRERVMEKAPKLF 500
             LM ILNG WIL +DW+K CM+   P+NEE YE+++D +GC DGPK GR RV+ K  KLF
Sbjct: 511  VLMGILNGIWILNMDWVKDCMKEKCPLNEEAYEIALDNYGCTDGPKTGRLRVLNKESKLF 570

Query: 499  NGLHIHLHGDFEQKYKGILEQLVEAAGGTLVTEDMLTSQSRDLEAESSTRLVVYSLELPP 320
             GL  +  GDF   Y+  L+ LV  AGGT++ ++ L + S + +A     +VVY+L+ P 
Sbjct: 571  IGLSFYFTGDFPPAYEEDLQDLVITAGGTVLEDEELAATSSNDQAAPKV-VVVYNLDSPG 629

Query: 319  EPQT-DDLIFMKQRYEQAEKLANETRSWVLGHTWILESIAACKLQPFSCC 173
              +  +++  + QR  +AE +A +  + V+GHTW++ESIA   LQPF  C
Sbjct: 630  GCKVGEEVSILWQRMNEAEGIAAKVGAQVIGHTWLVESIAMGSLQPFVSC 679


>ref|XP_002303120.1| predicted protein [Populus trichocarpa] gi|222844846|gb|EEE82393.1|
            predicted protein [Populus trichocarpa]
          Length = 380

 Score =  338 bits (866), Expect = 2e-90
 Identities = 178/348 (51%), Positives = 230/348 (66%), Gaps = 4/348 (1%)
 Frame = -2

Query: 1219 HVHRRCVDWAPQVFFKEGTDNLVNLDAELARAAKLKCSKCRVKGAALGCFIGSCKKTYHV 1040
            HVH  C++WAPQV+F   T  + NL AELAR AKLKCSKC +KGAALGC++ SCK++YH 
Sbjct: 37   HVHAVCIEWAPQVYFVGET--VKNLKAELARGAKLKCSKCGLKGAALGCYLKSCKRSYHA 94

Query: 1039 PCAVYIDDCRWD--AEDGLMLCPTHSLQKFPRERSTSEKKHGNNYHSTTKIAIQQPDKVW 866
            PCA+ I  CRWD  +E+ L+LC  HS  KFP E+S ++K +       T +A QQ +  W
Sbjct: 95   PCAMEITKCRWDYASENFLVLCSAHSSVKFPSEKSKAKKHNQKTSSVLTSVAPQQSN-FW 153

Query: 865  AASPGTTKEWVICGSSLSSAEKNFLAKFAKITGATVSKDWNPKVTHVIAQTDEKGAFSRT 686
              S    K+WV CGS+LSS EK  L KF  + G  V+K W   VTHVIA TD  GA +RT
Sbjct: 154  VGSCNGAKKWVFCGSALSSEEKCLLVKFGSMIGVPVNKFWASNVTHVIAATDSDGACTRT 213

Query: 685  QKALMAILNGSWILKIDWIKACMEAMNPVNEEPYEVSIDVHGCQDGPKNGRERVMEKAPK 506
             K LMAILNG W+L IDWIKACME+M+PV+EE YE+ +D HG +DGPKNGR   +  APK
Sbjct: 214  LKYLMAILNGKWVLTIDWIKACMESMHPVDEENYEIILDCHGSRDGPKNGRLSALNNAPK 273

Query: 505  LFNGLHIHLHGDFEQKYKGILEQLVEAAGGTLVTEDMLTSQSRDLEAESSTRLVVYSLEL 326
            LF+GL     GDF   YK  L+ LV AAGGTL+  +    + R      ST L+VY+L+ 
Sbjct: 274  LFSGLSFCFVGDFVAGYKEGLQSLVIAAGGTLLKSEEELVEQRHEPLSPSTTLIVYNLD- 332

Query: 325  PPE--PQTDDLIFMKQRYEQAEKLANETRSWVLGHTWILESIAACKLQ 188
            PP+     +++  + QR  +A+ LA +  S V+GHTW+LESI++ KLQ
Sbjct: 333  PPQGCKLGEEVSIIWQRTNEAQDLAAKVGSQVIGHTWLLESISSYKLQ 380


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