BLASTX nr result

ID: Coptis21_contig00015434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015434
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152229.1| PREDICTED: GTP-binding protein SAR1A-like [C...   167   1e-39
ref|NP_171762.1| Ras-related small GTP-binding protein [Arabidop...   167   1e-39
ref|XP_002889409.1| Os01g0254000 [Arabidopsis lyrata subsp. lyra...   167   1e-39
ref|XP_002874941.1| Os01g0254000 [Arabidopsis lyrata subsp. lyra...   166   1e-39
ref|XP_003633611.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding ...   166   2e-39

>ref|XP_004152229.1| PREDICTED: GTP-binding protein SAR1A-like [Cucumis sativus]
           gi|449524132|ref|XP_004169077.1| PREDICTED: GTP-binding
           protein SAR1A-like [Cucumis sativus]
          Length = 193

 Score =  167 bits (422), Expect = 1e-39
 Identities = 81/88 (92%), Positives = 85/88 (96%)
 Frame = +2

Query: 2   SKKELDALLSDESLATVPFLLLGNKIDIPYAASEDELRYHLGLIHFTTGKGKVLLADSNV 181
           SKKELDALLSDESLATVPFL+LGNKIDIPYAASEDELRYHLGL +FTTGKGKV L DSNV
Sbjct: 106 SKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRYHLGLTNFTTGKGKVNLTDSNV 165

Query: 182 RPLEVFMCSIVRKMGYGEGFKWLSQYIK 265
           RPLEVFMCSIVRKMGYG+GFKW+SQYIK
Sbjct: 166 RPLEVFMCSIVRKMGYGDGFKWMSQYIK 193


>ref|NP_171762.1| Ras-related small GTP-binding protein [Arabidopsis thaliana]
           gi|332189329|gb|AEE27450.1| Ras-related small
           GTP-binding protein [Arabidopsis thaliana]
          Length = 122

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/88 (93%), Positives = 85/88 (96%)
 Frame = +2

Query: 2   SKKELDALLSDESLATVPFLLLGNKIDIPYAASEDELRYHLGLIHFTTGKGKVLLADSNV 181
           SKKELDALLSDESLATVPFL+LGNKIDIPYAASEDELR+HLGL +FTTGKGKV L DSNV
Sbjct: 35  SKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRFHLGLSNFTTGKGKVNLTDSNV 94

Query: 182 RPLEVFMCSIVRKMGYGEGFKWLSQYIK 265
           RPLEVFMCSIVRKMGYGEGFKWLSQYIK
Sbjct: 95  RPLEVFMCSIVRKMGYGEGFKWLSQYIK 122


>ref|XP_002889409.1| Os01g0254000 [Arabidopsis lyrata subsp. lyrata]
           gi|297335251|gb|EFH65668.1| Os01g0254000 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 193

 Score =  167 bits (422), Expect = 1e-39
 Identities = 82/88 (93%), Positives = 85/88 (96%)
 Frame = +2

Query: 2   SKKELDALLSDESLATVPFLLLGNKIDIPYAASEDELRYHLGLIHFTTGKGKVLLADSNV 181
           SKKELDALLSDESLATVPFL+LGNKIDIPYAASEDELR+HLGL +FTTGKGKV L DSNV
Sbjct: 106 SKKELDALLSDESLATVPFLILGNKIDIPYAASEDELRFHLGLSNFTTGKGKVNLTDSNV 165

Query: 182 RPLEVFMCSIVRKMGYGEGFKWLSQYIK 265
           RPLEVFMCSIVRKMGYGEGFKWLSQYIK
Sbjct: 166 RPLEVFMCSIVRKMGYGEGFKWLSQYIK 193


>ref|XP_002874941.1| Os01g0254000 [Arabidopsis lyrata subsp. lyrata]
           gi|297320778|gb|EFH51200.1| Os01g0254000 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 193

 Score =  166 bits (421), Expect = 1e-39
 Identities = 82/88 (93%), Positives = 84/88 (95%)
 Frame = +2

Query: 2   SKKELDALLSDESLATVPFLLLGNKIDIPYAASEDELRYHLGLIHFTTGKGKVLLADSNV 181
           SKKELDALLSDESLA VPFL+LGNKIDIPYAASEDELRYHLGL +FTTGKGKV L DSNV
Sbjct: 106 SKKELDALLSDESLANVPFLILGNKIDIPYAASEDELRYHLGLSNFTTGKGKVNLTDSNV 165

Query: 182 RPLEVFMCSIVRKMGYGEGFKWLSQYIK 265
           RPLEVFMCSIVRKMGYGEGFKWLSQYIK
Sbjct: 166 RPLEVFMCSIVRKMGYGEGFKWLSQYIK 193


>ref|XP_003633611.1| PREDICTED: LOW QUALITY PROTEIN: GTP-binding protein SAR1A-like
           [Vitis vinifera]
          Length = 193

 Score =  166 bits (420), Expect = 2e-39
 Identities = 81/88 (92%), Positives = 85/88 (96%)
 Frame = +2

Query: 2   SKKELDALLSDESLATVPFLLLGNKIDIPYAASEDELRYHLGLIHFTTGKGKVLLADSNV 181
           SKKELDALLSDE+LA VPFL+LGNKIDIPYAASEDELRYHLGL +FTTGKGKV LADSNV
Sbjct: 106 SKKELDALLSDEALANVPFLVLGNKIDIPYAASEDELRYHLGLTNFTTGKGKVSLADSNV 165

Query: 182 RPLEVFMCSIVRKMGYGEGFKWLSQYIK 265
           RPLEVFMCSIVRKMGYG+GFKWLSQYIK
Sbjct: 166 RPLEVFMCSIVRKMGYGDGFKWLSQYIK 193


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