BLASTX nr result
ID: Coptis21_contig00015345
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00015345
(579 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002532715.1| conserved hypothetical protein [Ricinus comm... 80 3e-13
ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana] gi|1... 79 4e-13
ref|XP_002872660.1| F-box family protein [Arabidopsis lyrata sub... 79 4e-13
dbj|BAF01202.1| hypothetical protein [Arabidopsis thaliana] 79 4e-13
emb|CAB41726.1| putative protein [Arabidopsis thaliana] gi|72679... 79 4e-13
>ref|XP_002532715.1| conserved hypothetical protein [Ricinus communis]
gi|223527542|gb|EEF29664.1| conserved hypothetical
protein [Ricinus communis]
Length = 395
Score = 79.7 bits (195), Expect = 3e-13
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 35/218 (16%)
Frame = -1
Query: 576 FGFDSTTNEYKVIRF-----HHDRDEG-------EVFTLGSSRWRRINYGVPYET----- 448
FGFDS + +Y++IR DR E +V++L + W+RI G+PY
Sbjct: 146 FGFDSVSEDYRLIRMATFVGEDDRCESFDYEYQVQVYSLKNDSWKRIK-GLPYYLRFLYK 204
Query: 447 ------FRCPFGLLASNHLHWISSG---VGVPLTIVTFDMAAEEVHQIEPPPLVSTDIKS 295
R +G+ A N LHW+ +GV +I+ FD+ E Q+ P +
Sbjct: 205 PFFQVLHRRGYGVFACNALHWVMPHWPELGVNNSIIAFDIVNETFQQVPQPNWSDNQLNF 264
Query: 294 SL--GVIEERLCFVRNIGDNYYEIWVMKDYGMQGSWAKEYFFSPEVAKCLLDSSTNTVTK 121
+ GV+E RLC + N G ++WVM++YG++ SW K + F L S + +
Sbjct: 265 QVDAGVLEGRLCAMCNCGHECIDLWVMEEYGVKESWIKLFSFR-------LSKSMSNLMF 317
Query: 120 LR-------NGEFLVQYNCIDLGYYDPKQETCRPIVVE 28
LR + L++ N L +YD + + R + V+
Sbjct: 318 LRPLCYSKDREKMLLEVNDHKLVWYDWNKTSVRTVKVK 355
>ref|NP_192993.2| F-box protein CPR30 [Arabidopsis thaliana]
gi|145333023|ref|NP_001078377.1| F-box protein CPR30
[Arabidopsis thaliana]
gi|142989747|sp|Q9SU30.2|CPR30_ARATH RecName: Full=F-box
protein CPR30; AltName: Full=Protein CONSTITUTIVE
EXPRESSER OF PR GENES 30 gi|332657747|gb|AEE83147.1|
F-box protein CPR30 [Arabidopsis thaliana]
gi|332657748|gb|AEE83148.1| F-box protein CPR30
[Arabidopsis thaliana]
Length = 413
Score = 79.3 bits (194), Expect = 4e-13
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 28/159 (17%)
Frame = -1
Query: 573 GFDSTTNEYKVIR---FHHDRD---------EGEVFTLGSSRWRRIN----------YGV 460
G+DS +++YKV+R F D + E +VF+L + W+RI Y
Sbjct: 143 GYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFY 202
Query: 459 PYETFRCPFGLLASNHLHWI---SSGVGVPLTIVTFDMAAEEVHQIEPPPLVST---DIK 298
+ +R +G+LA N LHW+ G+ IV FD+A EE + P V+ DI+
Sbjct: 203 YHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQ 262
Query: 297 SSLGVIEERLCFVRNIGDNYYEIWVMKDYGMQGSWAKEY 181
+GV++ LC + N +Y ++W+MK+Y ++ SW K +
Sbjct: 263 MDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVF 301
>ref|XP_002872660.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297318497|gb|EFH48919.1| F-box family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 414
Score = 79.3 bits (194), Expect = 4e-13
Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 29/161 (18%)
Frame = -1
Query: 576 FGFDSTTNEYKVIR---FHHDRD---------EGEVFTLGSSRWRRIN-----------Y 466
FG+DS +++YKV+R F D D E +VF+L + W+R+ Y
Sbjct: 142 FGYDSVSDDYKVVRMVQFKIDSDDELGCSFPYEVKVFSLKKNSWKRVESVSTSSIRLLFY 201
Query: 465 GVPYETFRCPFGLLASNHLHWI---SSGVGVPLTIVTFDMAAEEVHQIEPPPLVST---D 304
+ +R +G+LA N LHW+ G+ IV FD+A EE + P V+ D
Sbjct: 202 FYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFGIVRFPETVANGNVD 261
Query: 303 IKSSLGVIEERLCFVRNIGDNYYEIWVMKDYGMQGSWAKEY 181
I+ + V++ LC + N Y ++W+MK+Y ++ SW K +
Sbjct: 262 IQMDISVLDGCLCLMCNYDQEYVDVWMMKEYNVRSSWTKVF 302
>dbj|BAF01202.1| hypothetical protein [Arabidopsis thaliana]
Length = 413
Score = 79.3 bits (194), Expect = 4e-13
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 28/159 (17%)
Frame = -1
Query: 573 GFDSTTNEYKVIR---FHHDRD---------EGEVFTLGSSRWRRIN----------YGV 460
G+DS +++YKV+R F D + E +VF+L + W+RI Y
Sbjct: 143 GYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFY 202
Query: 459 PYETFRCPFGLLASNHLHWI---SSGVGVPLTIVTFDMAAEEVHQIEPPPLVST---DIK 298
+ +R +G+LA N LHW+ G+ IV FD+A EE + P V+ DI+
Sbjct: 203 YHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQ 262
Query: 297 SSLGVIEERLCFVRNIGDNYYEIWVMKDYGMQGSWAKEY 181
+GV++ LC + N +Y ++W+MK+Y ++ SW K +
Sbjct: 263 MDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVF 301
>emb|CAB41726.1| putative protein [Arabidopsis thaliana] gi|7267958|emb|CAB78299.1|
putative protein [Arabidopsis thaliana]
Length = 408
Score = 79.3 bits (194), Expect = 4e-13
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 28/159 (17%)
Frame = -1
Query: 573 GFDSTTNEYKVIR---FHHDRD---------EGEVFTLGSSRWRRIN----------YGV 460
G+DS +++YKV+R F D + E +VF+L + W+RI Y
Sbjct: 143 GYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASSIQLLFYFY 202
Query: 459 PYETFRCPFGLLASNHLHWI---SSGVGVPLTIVTFDMAAEEVHQIEPPPLVST---DIK 298
+ +R +G+LA N LHW+ G+ IV FD+A EE + P V+ DI+
Sbjct: 203 YHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAVANGNVDIQ 262
Query: 297 SSLGVIEERLCFVRNIGDNYYEIWVMKDYGMQGSWAKEY 181
+GV++ LC + N +Y ++W+MK+Y ++ SW K +
Sbjct: 263 MDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVF 301