BLASTX nr result

ID: Coptis21_contig00015302 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015302
         (1826 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274545.2| PREDICTED: leucine-rich repeat extensin-like...   505   e-140
ref|XP_002308141.1| predicted protein [Populus trichocarpa] gi|2...   504   e-140
ref|XP_002514492.1| LRX2, putative [Ricinus communis] gi|2235463...   503   e-140
ref|XP_002331387.1| predicted protein [Populus trichocarpa] gi|2...   501   e-139
dbj|BAF48663.1| leucine-rich repeat/extensin [Nicotiana plumbagi...   490   e-136

>ref|XP_002274545.2| PREDICTED: leucine-rich repeat extensin-like protein 2-like [Vitis
            vinifera]
          Length = 610

 Score =  505 bits (1300), Expect = e-140
 Identities = 246/340 (72%), Positives = 284/340 (83%), Gaps = 2/340 (0%)
 Frame = +2

Query: 314  LTFENPRLRQAYIALQSWKSAIFSDPFNFTANWNGPNVCSYGGVYCAP-LPGSNVVVVAG 490
            L FENPRLRQAYIALQ+WK+AIFSDPFNFT+NW GP VCSY GVYCAP L   ++ VVAG
Sbjct: 37   LKFENPRLRQAYIALQAWKTAIFSDPFNFTSNWVGPQVCSYMGVYCAPSLSNPSLKVVAG 96

Query: 491  IDLNHADIAGYLPHELGYLEDLALFHLNSNRFCGVVPETFQRLKLLHELDLSNNRFAGPF 670
            IDLNHADIAGYLP ELG L DLALFHLNSNRFCG+VP + +R+KLL+ELD+SNNRF G F
Sbjct: 97   IDLNHADIAGYLPSELGLLSDLALFHLNSNRFCGIVPSSLKRMKLLYELDISNNRFVGSF 156

Query: 671  PKAVLSMPALKYLDLRFNEFEGPIPPQLFDKPLDAIFLNDNRFRVGIPKNLGNSPVSVVV 850
            P  VLSMP+LK+LDLRFNEFEGP+P QLF+K LDA+FLNDNRF+ GIP+NLGNSPVSV+V
Sbjct: 157  PNVVLSMPSLKFLDLRFNEFEGPVPSQLFNKDLDAVFLNDNRFQFGIPQNLGNSPVSVLV 216

Query: 851  LANNNLGGCIPSSIGKMANTLNEIILLNDNLTGCIPSEIGLLKQLTVFDVSFNHLQGPLP 1030
            LANNNLGGCIP SIGKM  TLNEIIL+NDNLT C+P +IGLLK++TVFDVSFNHLQG LP
Sbjct: 217  LANNNLGGCIPGSIGKMGKTLNEIILMNDNLTSCLPPQIGLLKEVTVFDVSFNHLQGSLP 276

Query: 1031 PRVTQMKSLEQLDIAQNSLTGALPTALCSSTTLPNLDNFTYSYNYFTSDGN-CASSTGRL 1207
            P + +MKSLEQLD+A NS TGA+P ++C    LP L+NFTYS+NYFT +   CA+ TG  
Sbjct: 277  PAIGKMKSLEQLDVAHNSFTGAIPPSICQ---LPRLENFTYSFNYFTGEAPVCAAITG-- 331

Query: 1208 VTDGRKNCIPREPMQRSLRECSSAAAKPVDCSKFKCDGNN 1327
              DGR+NCIP +  QRS   CSS AA+PVDCSK KC G +
Sbjct: 332  --DGRQNCIPGKTDQRSSSMCSSQAARPVDCSKSKCGGGS 369


>ref|XP_002308141.1| predicted protein [Populus trichocarpa] gi|222854117|gb|EEE91664.1|
            predicted protein [Populus trichocarpa]
          Length = 525

 Score =  504 bits (1298), Expect = e-140
 Identities = 251/374 (67%), Positives = 294/374 (78%), Gaps = 7/374 (1%)
 Frame = +2

Query: 215  PPTFSSYKLLLFTIFAVLIQILSSTEAAPGGGA-----LTFENPRLRQAYIALQSWKSAI 379
            PP       LL +  + L QI S+              L FENPR+R+AYIALQSWK AI
Sbjct: 4    PPRLFLILFLLVSTSSFLFQISSAAHEDEDHDIDVDPNLKFENPRIRRAYIALQSWKQAI 63

Query: 380  FSDPFNFTANWNGPNVCSYGGVYCAPLPGSNVV-VVAGIDLNHADIAGYLPHELGYLEDL 556
            +SDP NFTANW G +VCSY G++CAP P +  V VVAGIDLNHADIAGYLP ELG L DL
Sbjct: 64   YSDPLNFTANWKGSDVCSYMGIFCAPSPQNKKVRVVAGIDLNHADIAGYLPTELGLLTDL 123

Query: 557  ALFHLNSNRFCGVVPETFQRLKLLHELDLSNNRFAGPFPKAVLSMPALKYLDLRFNEFEG 736
            ALFH+NSNRFCGVVP +F ++KLLHELDLSNNRF G FPK VLS+P+LKYLDLRFNEFEG
Sbjct: 124  ALFHINSNRFCGVVPNSFSKMKLLHELDLSNNRFVGKFPKVVLSLPSLKYLDLRFNEFEG 183

Query: 737  PIPPQLFDKPLDAIFLNDNRFRVGIPKNLGNSPVSVVVLANNNLGGCIPSSIGKMANTLN 916
             +P QLFDKPLDAIFLNDNRF+ GIP+NLGNSPVSV+V ANNNLGGCIP SIGKM  TLN
Sbjct: 184  SVPSQLFDKPLDAIFLNDNRFQFGIPENLGNSPVSVLVFANNNLGGCIPGSIGKMGKTLN 243

Query: 917  EIILLNDNLTGCIPSEIGLLKQLTVFDVSFNHLQGPLPPRVTQMKSLEQLDIAQNSLTGA 1096
            EIIL+NDNLTGC+P +IG+LK++TVFDVSFNHLQG LP  +  MKS+EQLDIA NS TGA
Sbjct: 244  EIILMNDNLTGCLPPQIGMLKEVTVFDVSFNHLQGSLPSSIGNMKSVEQLDIAHNSFTGA 303

Query: 1097 LPTALCSSTTLPNLDNFTYSYNYFTSDG-NCASSTGRLVTDGRKNCIPREPMQRSLRECS 1273
            +P ++C    LPNL NFT+S+NYFT +  +CA+  G  V++G +NCIP +  QRS ++CS
Sbjct: 304  IPASVCQ---LPNLQNFTFSFNYFTGEAPSCAAIGG--VSNGTQNCIPGKTNQRSAKQCS 358

Query: 1274 SAAAKPVDCSKFKC 1315
            S AA+PVDCSKFKC
Sbjct: 359  SEAARPVDCSKFKC 372


>ref|XP_002514492.1| LRX2, putative [Ricinus communis] gi|223546391|gb|EEF47892.1| LRX2,
            putative [Ricinus communis]
          Length = 766

 Score =  503 bits (1294), Expect = e-140
 Identities = 256/386 (66%), Positives = 298/386 (77%), Gaps = 8/386 (2%)
 Frame = +2

Query: 194  MMHPLQLPPTFSSYKLLLFTIFAVLIQILSSTEA-----APGGGALTFENPRLRQAYIAL 358
            M +    PP F  + LLL      L+QI  +T            +  FENPRL QAYIAL
Sbjct: 1    MSYSSSSPPPFFFFILLLLPF---LLQISCATHEDELLDIQVDPSFKFENPRLGQAYIAL 57

Query: 359  QSWKSAIFSDPFNFTANWNGPNVCSYGGVYCAPLPGS-NVVVVAGIDLNHADIAGYLPHE 535
            Q+ K +IFSDPFNFT NW GPNVCSY GV+CAP P +  + VVAGIDLNHADIAGYLP E
Sbjct: 58   QALKQSIFSDPFNFTTNWKGPNVCSYMGVFCAPSPSNPKIRVVAGIDLNHADIAGYLPPE 117

Query: 536  LGYLEDLALFHLNSNRFCGVVPETFQRLKLLHELDLSNNRFAGPFPKAVLSMPALKYLDL 715
            LG L DLALFHLNSNRFCGVVP TF++LKLLHELDLSNNRF G FPK +LS+P+LKYLDL
Sbjct: 118  LGLLTDLALFHLNSNRFCGVVPATFRKLKLLHELDLSNNRFVGKFPKVLLSLPSLKYLDL 177

Query: 716  RFNEFEGPIPPQLFDKPLDAIFLNDNRFRVGIPKNLGNSPVSVVVLANNNLGGCIPSSIG 895
            RFNEFEG +P  LFD+PLDAIFLNDNRF+ GIP+NLGNSPVSV+VLANNNLGGCIP SIG
Sbjct: 178  RFNEFEGSVPSNLFDRPLDAIFLNDNRFQFGIPENLGNSPVSVLVLANNNLGGCIPGSIG 237

Query: 896  KMANTLNEIILLNDNLTGCIPSEIGLLKQLTVFDVSFNHLQGPLPPRVTQMKSLEQLDIA 1075
             M  TLNEIIL+NDNLTGC+P EIGLLK+LTVFDVSFN+LQG LP  +  MK +EQLDIA
Sbjct: 238  NMGKTLNEIILMNDNLTGCLPPEIGLLKELTVFDVSFNNLQGSLPSSIGNMKKVEQLDIA 297

Query: 1076 QNSLTGALPTALCSSTTLPNLDNFTYSYNYFTSDG-NCASSTG-RLVTDGRKNCIPREPM 1249
             NS TG +P ++C    LP+L NFTYS+NYFT +  +CA+  G R++T G KNCIP +  
Sbjct: 298  HNSFTGVVPASICQ---LPSLQNFTYSFNYFTGEAPSCAAIGGSRVLTKGTKNCIPGKMD 354

Query: 1250 QRSLRECSSAAAKPVDCSKFKCDGNN 1327
            QRS +ECSS  A+PV+CSKFKC G++
Sbjct: 355  QRSAKECSSEKARPVNCSKFKCGGSS 380


>ref|XP_002331387.1| predicted protein [Populus trichocarpa] gi|222873601|gb|EEF10732.1|
            predicted protein [Populus trichocarpa]
          Length = 481

 Score =  501 bits (1289), Expect = e-139
 Identities = 249/380 (65%), Positives = 298/380 (78%), Gaps = 9/380 (2%)
 Frame = +2

Query: 212  LPPTFSSYKLLLFTIFAVLIQILSSTEAAPGGG--------ALTFENPRLRQAYIALQSW 367
            +PP  S   L+LF + +    +   + AA   G         L FENPR+R+AYIALQSW
Sbjct: 1    MPPPRSF--LILFLLVSTPSFLFQISSAAHEDGDHDINVDSTLKFENPRIRRAYIALQSW 58

Query: 368  KSAIFSDPFNFTANWNGPNVCSYGGVYCAPLPGSNVV-VVAGIDLNHADIAGYLPHELGY 544
            K AIFSDPFNFTANWNG +VCSY GV+CAP P +  + VVAGIDLNHADIAGYLP ELG 
Sbjct: 59   KQAIFSDPFNFTANWNGSDVCSYMGVFCAPSPKNKKIRVVAGIDLNHADIAGYLPTELGL 118

Query: 545  LEDLALFHLNSNRFCGVVPETFQRLKLLHELDLSNNRFAGPFPKAVLSMPALKYLDLRFN 724
            + DLAL H+NSNRFCGVVP +F+++KLLHELDLSNNR  G FPK V+S+P+LKYLDLRFN
Sbjct: 119  IIDLALLHINSNRFCGVVPSSFRKMKLLHELDLSNNRLMGKFPKVVVSLPSLKYLDLRFN 178

Query: 725  EFEGPIPPQLFDKPLDAIFLNDNRFRVGIPKNLGNSPVSVVVLANNNLGGCIPSSIGKMA 904
            EFEG +P QLFDKPLDAIFLNDNRFR GIP+NLGNSP SV+VLANNNLGGCIP SIGKM+
Sbjct: 179  EFEGSVPSQLFDKPLDAIFLNDNRFRFGIPENLGNSPASVLVLANNNLGGCIPGSIGKMS 238

Query: 905  NTLNEIILLNDNLTGCIPSEIGLLKQLTVFDVSFNHLQGPLPPRVTQMKSLEQLDIAQNS 1084
             TLNEIIL+NDNLTGC+P +IG+LK++TVFDVSFNHLQG LP  +  MKS+EQLDIA NS
Sbjct: 239  KTLNEIILMNDNLTGCLPPQIGMLKEVTVFDVSFNHLQGALPSSIGNMKSVEQLDIAHNS 298

Query: 1085 LTGALPTALCSSTTLPNLDNFTYSYNYFTSDGNCASSTGRLVTDGRKNCIPREPMQRSLR 1264
             TG +P ++     LPNL NFTYS+NYFT +    ++ G  V++G +NCIP +  QRS +
Sbjct: 299  FTGVVPASVYQ---LPNLQNFTYSFNYFTGEAPSCAAIG-AVSNGTQNCIPGKMNQRSAK 354

Query: 1265 ECSSAAAKPVDCSKFKCDGN 1324
            +CSS AA+P+DCSKFKC G+
Sbjct: 355  QCSSEAARPIDCSKFKCGGS 374


>dbj|BAF48663.1| leucine-rich repeat/extensin [Nicotiana plumbaginifolia]
            gi|127058167|dbj|BAF48664.1| leucine-rich repeat/extensin
            [Nicotiana plumbaginifolia]
          Length = 725

 Score =  490 bits (1261), Expect = e-136
 Identities = 234/336 (69%), Positives = 279/336 (83%), Gaps = 2/336 (0%)
 Frame = +2

Query: 314  LTFENPRLRQAYIALQSWKSAIFSDPFNFTANWNGPNVCSYGGVYCAP-LPGSNVVVVAG 490
            L+FENP+LR AYIALQ+WK+A+FSDPFNFTANW GPNVCSYGGV+CA  L   ++ VVAG
Sbjct: 43   LSFENPKLRVAYIALQTWKAAMFSDPFNFTANWTGPNVCSYGGVFCAQSLTNDSIRVVAG 102

Query: 491  IDLNHADIAGYLPHELGYLEDLALFHLNSNRFCGVVPETFQRLKLLHELDLSNNRFAGPF 670
            IDLNHADIAGYL  ELG L DL LFHLNSNRFCG+VP+TF  LKLL ELDLSNNRF G F
Sbjct: 103  IDLNHADIAGYLVPELGLLTDLVLFHLNSNRFCGIVPKTFSHLKLLRELDLSNNRFVGGF 162

Query: 671  PKAVLSMPALKYLDLRFNEFEGPIPPQLFDKPLDAIFLNDNRFRVGIPKNLGNSPVSVVV 850
            PK VLS+P+LK+LDLRFN+FEGP+P +LFDK LDA+FLNDNRFR GIP+NLGNSPVSV+V
Sbjct: 163  PKVVLSLPSLKFLDLRFNDFEGPVPSKLFDKDLDALFLNDNRFRFGIPENLGNSPVSVLV 222

Query: 851  LANNNLGGCIPSSIGKMANTLNEIILLNDNLTGCIPSEIGLLKQLTVFDVSFNHLQGPLP 1030
             ANNNLGGCIP+SIGKM+NTLNE+IL+NDNLTGC+P EIG+LK+LTVFDVSFN +QGPLP
Sbjct: 223  FANNNLGGCIPASIGKMSNTLNELILMNDNLTGCLPMEIGMLKKLTVFDVSFNKIQGPLP 282

Query: 1031 PRVTQMKSLEQLDIAQNSLTGALPTALCSSTTLPNLDNFTYSYNYFTSDGN-CASSTGRL 1207
              V++M+S+EQL++A N LTG +P ++C    LP L NFTYS+NYFT +   CA++    
Sbjct: 283  STVSRMRSVEQLNVAHNKLTGVIPASICQ---LPRLQNFTYSFNYFTGEAPVCAATRSGR 339

Query: 1208 VTDGRKNCIPREPMQRSLRECSSAAAKPVDCSKFKC 1315
            + DG +NCI  +  QRS +ECSS  AKP DC K +C
Sbjct: 340  IVDGEENCIAGKEDQRSAKECSSDDAKPYDCRKSQC 375


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