BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015286
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308350.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_002531168.1| ubiquitin-protein ligase, putative [Ricinus ...   117   1e-24
ref|XP_002276459.1| PREDICTED: F-box protein At3g58530 [Vitis vi...   110   1e-22
ref|XP_003533907.1| PREDICTED: F-box protein At3g58530-like [Gly...   109   3e-22
ref|NP_567069.1| F-box protein [Arabidopsis thaliana] gi|7515490...   108   6e-22

>ref|XP_002308350.1| predicted protein [Populus trichocarpa] gi|222854326|gb|EEE91873.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  117 bits (294), Expect = 7e-25
 Identities = 56/62 (90%), Positives = 58/62 (93%)
 Frame = +3

Query: 3   TSLEFLSLFGIVGVTDKCLEALSRFCSNTLMTLDVNGCVGIKRRSRDELLQLFPHLICFK 182
           TSLEFLSLFGIVGVTDKCLE LSRFCSNT+ TLDVNGC+GIKRRSRDELLQLFP L CFK
Sbjct: 279 TSLEFLSLFGIVGVTDKCLEVLSRFCSNTVTTLDVNGCIGIKRRSRDELLQLFPRLRCFK 338

Query: 183 VH 188
           VH
Sbjct: 339 VH 340


>ref|XP_002531168.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223529238|gb|EEF31211.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 351

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/62 (90%), Positives = 58/62 (93%)
 Frame = +3

Query: 3   TSLEFLSLFGIVGVTDKCLEALSRFCSNTLMTLDVNGCVGIKRRSRDELLQLFPHLICFK 182
           T LEFLSLFGIVGVTDKCLEALSR CSNT+ TLDVNGC+GIKRRSRDELLQLFPHL CFK
Sbjct: 289 TYLEFLSLFGIVGVTDKCLEALSRSCSNTITTLDVNGCIGIKRRSRDELLQLFPHLRCFK 348

Query: 183 VH 188
           VH
Sbjct: 349 VH 350


>ref|XP_002276459.1| PREDICTED: F-box protein At3g58530 [Vitis vinifera]
          Length = 353

 Score =  110 bits (275), Expect = 1e-22
 Identities = 53/62 (85%), Positives = 56/62 (90%)
 Frame = +3

Query: 3   TSLEFLSLFGIVGVTDKCLEALSRFCSNTLMTLDVNGCVGIKRRSRDELLQLFPHLICFK 182
           TSLEFLSLFGIVGVTDKCLEALSR CSN + TLDVNGC+GIK RSRDELLQ FP+L CFK
Sbjct: 291 TSLEFLSLFGIVGVTDKCLEALSRSCSNMITTLDVNGCIGIKGRSRDELLQYFPYLRCFK 350

Query: 183 VH 188
           VH
Sbjct: 351 VH 352


>ref|XP_003533907.1| PREDICTED: F-box protein At3g58530-like [Glycine max]
          Length = 353

 Score =  109 bits (272), Expect = 3e-22
 Identities = 51/62 (82%), Positives = 57/62 (91%)
 Frame = +3

Query: 3   TSLEFLSLFGIVGVTDKCLEALSRFCSNTLMTLDVNGCVGIKRRSRDELLQLFPHLICFK 182
           TSLEFLSLFGIVGVTDKCLE LS+ CSN + TLDVNGC+GIK+RSR+ELLQLFP+L CFK
Sbjct: 291 TSLEFLSLFGIVGVTDKCLEELSKSCSNKITTLDVNGCIGIKKRSREELLQLFPYLKCFK 350

Query: 183 VH 188
           VH
Sbjct: 351 VH 352


>ref|NP_567069.1| F-box protein [Arabidopsis thaliana]
           gi|75154905|sp|Q8LB33.1|FB330_ARATH RecName: Full=F-box
           protein At3g58530 gi|21593045|gb|AAM64994.1| unknown
           [Arabidopsis thaliana] gi|332646275|gb|AEE79796.1| F-box
           protein [Arabidopsis thaliana]
          Length = 353

 Score =  108 bits (269), Expect = 6e-22
 Identities = 51/62 (82%), Positives = 55/62 (88%)
 Frame = +3

Query: 3   TSLEFLSLFGIVGVTDKCLEALSRFCSNTLMTLDVNGCVGIKRRSRDELLQLFPHLICFK 182
           TSLEFLSLFGIVGVTD+CLE LS+ CS TL TLDVNGC GIKRRSR+ELLQ+FP L CFK
Sbjct: 291 TSLEFLSLFGIVGVTDRCLETLSQTCSTTLTTLDVNGCTGIKRRSREELLQMFPRLTCFK 350

Query: 183 VH 188
           VH
Sbjct: 351 VH 352