BLASTX nr result

ID: Coptis21_contig00015178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015178
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260...    49   2e-06
emb|CBI20307.3| unnamed protein product [Vitis vinifera]               53   5e-06
ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250...    53   5e-06

>ref|XP_002282360.1| PREDICTED: uncharacterized protein LOC100260511 [Vitis vinifera]
           gi|302143014|emb|CBI20309.3| unnamed protein product
           [Vitis vinifera]
          Length = 916

 Score = 48.9 bits (115), Expect(2) = 2e-06
 Identities = 25/54 (46%), Positives = 32/54 (59%)
 Frame = +2

Query: 2   GNLLDLSTVFKLKYLNNSTVFTSLVCRSLDSVVSGDSVNYFEPISLLTFSPRNY 163
           G LLDL+ V KL  + N +  T LV  +L+S+      NYFEPIS+L F   NY
Sbjct: 184 GELLDLAAVLKLNNVKNLSTVTDLVGGTLESLNLASDSNYFEPISMLVFPQMNY 237



 Score = 27.7 bits (60), Expect(2) = 2e-06
 Identities = 15/25 (60%), Positives = 16/25 (64%)
 Frame = +1

Query: 235 SMLGLRSQISICSELCRRSCVFELE 309
           S +GL S ISICS L R    FELE
Sbjct: 243 SEVGLESNISICSMLSRPDNWFELE 267


>emb|CBI20307.3| unnamed protein product [Vitis vinifera]
          Length = 1709

 Score = 53.1 bits (126), Expect(2) = 5e-06
 Identities = 28/54 (51%), Positives = 33/54 (61%)
 Frame = +2

Query: 2    GNLLDLSTVFKLKYLNNSTVFTSLVCRSLDSVVSGDSVNYFEPISLLTFSPRNY 163
            GNLL LS V KL  + NS+  T LV  +L S+ S    NYFEPIS+L F   NY
Sbjct: 1004 GNLLRLSAVLKLSNVKNSSTITDLVTGTLKSLNSAHDSNYFEPISILIFPEMNY 1057



 Score = 22.3 bits (46), Expect(2) = 5e-06
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 166  YVYSLVVNDIESGFSGGSSVAKDSMLGLRSQISICSEL 279
            Y Y+L  +   +G  GG+ V + + L   S  SICS L
Sbjct: 1057 YKYTLASSG--TGCPGGADVPETASLSTDSMNSICSIL 1092


>ref|XP_002282376.2| PREDICTED: uncharacterized protein LOC100250261 [Vitis vinifera]
          Length = 932

 Score = 53.1 bits (126), Expect(2) = 5e-06
 Identities = 28/54 (51%), Positives = 33/54 (61%)
 Frame = +2

Query: 2   GNLLDLSTVFKLKYLNNSTVFTSLVCRSLDSVVSGDSVNYFEPISLLTFSPRNY 163
           GNLL LS V KL  + NS+  T LV  +L S+ S    NYFEPIS+L F   NY
Sbjct: 169 GNLLRLSAVLKLSNVKNSSTITDLVTGTLKSLNSAHDSNYFEPISILIFPEMNY 222



 Score = 22.3 bits (46), Expect(2) = 5e-06
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 166 YVYSLVVNDIESGFSGGSSVAKDSMLGLRSQISICSEL 279
           Y Y+L  +   +G  GG+ V + + L   S  SICS L
Sbjct: 222 YKYTLASSG--TGCPGGADVPETASLSTDSMNSICSIL 257


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