BLASTX nr result

ID: Coptis21_contig00015112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015112
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|XP_002527563.1| conserved hypothetical protein [Ricinus comm...   123   2e-26
ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycin...   119   2e-25
ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago ...   115   4e-24
ref|XP_002276937.1| PREDICTED: uncharacterized protein LOC100265...   114   6e-24

>ref|XP_002312864.1| predicted protein [Populus trichocarpa] gi|222849272|gb|EEE86819.1|
           predicted protein [Populus trichocarpa]
          Length = 129

 Score =  124 bits (312), Expect = 6e-27
 Identities = 68/121 (56%), Positives = 84/121 (69%), Gaps = 7/121 (5%)
 Frame = -3

Query: 343 ALSFSSVTLPSSKFPT----NSVSNHGFQKYLIITKCEQTNDSSE---LSADRNSTLKIG 185
           A SFSS +      PT    +S++N   +K  +IT+CE    SS    L A   + L IG
Sbjct: 2   AFSFSSTSTIPRTNPTLQSNHSINNARNRKLNVITRCESRESSSSETNLPAKSTAKLGIG 61

Query: 184 SAIIVVDAPKTIKTAASVPCLRVNADLVKTGDVGRIVARKPKDVWAVRLAIGTYLIDGKH 5
           S ++V++APK IKTAA++PCLRVN   VK GDVGRIV+RKPKDVWAVRLAIGTYLIDGK+
Sbjct: 62  SPVVVIEAPKMIKTAATMPCLRVNTGFVKPGDVGRIVSRKPKDVWAVRLAIGTYLIDGKY 121

Query: 4   F 2
           F
Sbjct: 122 F 122


>ref|XP_002527563.1| conserved hypothetical protein [Ricinus communis]
           gi|223533055|gb|EEF34815.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 128

 Score =  123 bits (308), Expect = 2e-26
 Identities = 70/120 (58%), Positives = 82/120 (68%), Gaps = 10/120 (8%)
 Frame = -3

Query: 331 SSVTLPSSKFPTNSVSNHGFQ---------KYLIITKCEQTNDSSELSADRNST-LKIGS 182
           SS+T P+S  P   + N   Q          + + TKC+    SSE S     T L IGS
Sbjct: 3   SSLT-PTSTIPYTKLHNSILQFTNANFRTPSFSVATKCQSQESSSETSPPAKITKLAIGS 61

Query: 181 AIIVVDAPKTIKTAASVPCLRVNADLVKTGDVGRIVARKPKDVWAVRLAIGTYLIDGKHF 2
            I+VV+APK IKTAASVPCLRVN+ LVK GDVGRIV+RKPKDVWAVRL+IGTYLIDGK+F
Sbjct: 62  PIVVVEAPKMIKTAASVPCLRVNSGLVKPGDVGRIVSRKPKDVWAVRLSIGTYLIDGKYF 121


>ref|NP_001238276.1| uncharacterized protein LOC100305889 [Glycine max]
           gi|255626895|gb|ACU13792.1| unknown [Glycine max]
          Length = 128

 Score =  119 bits (299), Expect = 2e-25
 Identities = 66/119 (55%), Positives = 85/119 (71%), Gaps = 5/119 (4%)
 Frame = -3

Query: 343 ALSFS-SVTLPSSKFPTNSVSNHGFQK----YLIITKCEQTNDSSELSADRNSTLKIGSA 179
           ALS S ++T P  +    S  N   Q+     + + +CE    SSEL  +++S L+IGS 
Sbjct: 2   ALSLSYAITKPFLRVQDRSSMNCELQRPKNGVVALIRCESKESSSELP-EKHSKLEIGSP 60

Query: 178 IIVVDAPKTIKTAASVPCLRVNADLVKTGDVGRIVARKPKDVWAVRLAIGTYLIDGKHF 2
           II ++APK IKTAA++PCLRVN+ LVK GDVGRIV+RKPKDVWAVRL IGTYL+DGK+F
Sbjct: 61  IIFIEAPKMIKTAATMPCLRVNSGLVKPGDVGRIVSRKPKDVWAVRLRIGTYLVDGKYF 119


>ref|XP_003601356.1| hypothetical protein MTR_3g079820 [Medicago truncatula]
           gi|355490404|gb|AES71607.1| hypothetical protein
           MTR_3g079820 [Medicago truncatula]
          Length = 128

 Score =  115 bits (288), Expect = 4e-24
 Identities = 65/118 (55%), Positives = 82/118 (69%), Gaps = 4/118 (3%)
 Frame = -3

Query: 343 ALSFS-SVTLPSSKFPTNSV--SNHGFQKYLIITKCEQTNDSSELSA-DRNSTLKIGSAI 176
           +LS S  +T P  KF ++      H     + + +CE  + S E    ++ S L  GS I
Sbjct: 2   SLSLSCGITKPFLKFNSSLKYQQQHRPNISVALVRCESKDSSEENELLEKRSKLDKGSPI 61

Query: 175 IVVDAPKTIKTAASVPCLRVNADLVKTGDVGRIVARKPKDVWAVRLAIGTYLIDGKHF 2
           I+++APK IKTAASVPCLRVN+ LVK GDVGRIV+RKPKDVWAVRL+IGTYLIDGK+F
Sbjct: 62  IIIEAPKMIKTAASVPCLRVNSGLVKPGDVGRIVSRKPKDVWAVRLSIGTYLIDGKYF 119


>ref|XP_002276937.1| PREDICTED: uncharacterized protein LOC100265104 [Vitis vinifera]
           gi|296084005|emb|CBI24393.3| unnamed protein product
           [Vitis vinifera]
          Length = 113

 Score =  114 bits (286), Expect = 6e-24
 Identities = 64/114 (56%), Positives = 77/114 (67%)
 Frame = -3

Query: 343 ALSFSSVTLPSSKFPTNSVSNHGFQKYLIITKCEQTNDSSELSADRNSTLKIGSAIIVVD 164
           ALS SS+   +   P N        +     KCE      E S+ + S L+IGS IIV++
Sbjct: 2   ALSLSSIFGVAGSKPLNK----SILERQTRVKCE----FGEKSSPKTSELEIGSPIIVIE 53

Query: 163 APKTIKTAASVPCLRVNADLVKTGDVGRIVARKPKDVWAVRLAIGTYLIDGKHF 2
           APK +KTAASVPCLR NA LVK GDVGR+V+RKPKDVWAVRL+IGTYLID K+F
Sbjct: 54  APKVLKTAASVPCLRANAGLVKAGDVGRVVSRKPKDVWAVRLSIGTYLIDAKYF 107


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