BLASTX nr result
ID: Coptis21_contig00015093
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00015093
(310 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera] 169 3e-40
ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containi... 168 4e-40
emb|CBI26570.3| unnamed protein product [Vitis vinifera] 168 4e-40
ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containi... 167 6e-40
ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|2... 167 6e-40
>emb|CAN76112.1| hypothetical protein VITISV_005527 [Vitis vinifera]
Length = 1494
Score = 169 bits (427), Expect = 3e-40
Identities = 81/102 (79%), Positives = 92/102 (90%)
Frame = -2
Query: 306 EEMVQAGFGRDEMTYNTMIHMYGKQGQHDLAFHLYKDMKSAGRNPDAITYTVLIDSLGKA 127
E+MV+ GFG+DEMTYNT+IHMYGK+GQHDLAF LY DMK +GR+PDA+TYTVLIDSLGKA
Sbjct: 420 EDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKA 479
Query: 126 GKITEAADVMSGMLDAGIKPTLRTFSALICGYAKAGMRVEAE 1
I EAA+VMS ML+A +KPTLRTFSALICGYAKAG RVEAE
Sbjct: 480 NMIKEAAEVMSEMLNAXVKPTLRTFSALICGYAKAGKRVEAE 521
Score = 58.5 bits (140), Expect = 5e-07
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = -2
Query: 276 DEMTYNTMIHMYGKQGQHDLAFHLYKDMKSAGRNPDAITYTVLIDSLGKAGKITEAADVM 97
D TYN MI +YG+ G A L+KD++S G PDA+TY L+ + + G + + ++
Sbjct: 360 DLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEIC 419
Query: 96 SGMLDAGIKPTLRTFSALICGYAKAG 19
M+ G T++ +I Y K G
Sbjct: 420 EDMVKMGFGKDEMTYNTIIHMYGKRG 445
Score = 55.1 bits (131), Expect = 6e-06
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Frame = -2
Query: 300 MVQAGFGRDEMTYNTMIHMYGKQGQH--DLAFHLYKDMKSAGRNPDAITYTVLIDSLGKA 127
M G D +++NT+I+ K G +LA L +++ +G PD ITY LI + +
Sbjct: 280 MRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRE 339
Query: 126 GKITEAADVMSGMLDAGIKPTLRTFSALICGYAKAGMRVEA 4
+ EA V + M+ +P L T++A+I Y + GM EA
Sbjct: 340 SNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREA 380
>ref|XP_002275236.2| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Vitis vinifera]
Length = 1442
Score = 168 bits (426), Expect = 4e-40
Identities = 81/102 (79%), Positives = 92/102 (90%)
Frame = -2
Query: 306 EEMVQAGFGRDEMTYNTMIHMYGKQGQHDLAFHLYKDMKSAGRNPDAITYTVLIDSLGKA 127
E+MV+ GFG+DEMTYNT+IHMYGK+GQHDLAF LY DMK +GR+PDA+TYTVLIDSLGKA
Sbjct: 388 EDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKA 447
Query: 126 GKITEAADVMSGMLDAGIKPTLRTFSALICGYAKAGMRVEAE 1
I EAA+VMS ML+A +KPTLRTFSALICGYAKAG RVEAE
Sbjct: 448 NMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAE 489
Score = 58.5 bits (140), Expect = 5e-07
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = -2
Query: 276 DEMTYNTMIHMYGKQGQHDLAFHLYKDMKSAGRNPDAITYTVLIDSLGKAGKITEAADVM 97
D TYN MI +YG+ G A L+KD++S G PDA+TY L+ + + G + + ++
Sbjct: 328 DLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEIC 387
Query: 96 SGMLDAGIKPTLRTFSALICGYAKAG 19
M+ G T++ +I Y K G
Sbjct: 388 EDMVKMGFGKDEMTYNTIIHMYGKRG 413
Score = 55.1 bits (131), Expect = 6e-06
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Frame = -2
Query: 300 MVQAGFGRDEMTYNTMIHMYGKQGQH--DLAFHLYKDMKSAGRNPDAITYTVLIDSLGKA 127
M G D +++NT+I+ K G +LA L +++ +G PD ITY LI + +
Sbjct: 248 MRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRE 307
Query: 126 GKITEAADVMSGMLDAGIKPTLRTFSALICGYAKAGMRVEA 4
+ EA V + M+ +P L T++A+I Y + GM EA
Sbjct: 308 SNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREA 348
>emb|CBI26570.3| unnamed protein product [Vitis vinifera]
Length = 1042
Score = 168 bits (426), Expect = 4e-40
Identities = 81/102 (79%), Positives = 92/102 (90%)
Frame = -2
Query: 306 EEMVQAGFGRDEMTYNTMIHMYGKQGQHDLAFHLYKDMKSAGRNPDAITYTVLIDSLGKA 127
E+MV+ GFG+DEMTYNT+IHMYGK+GQHDLAF LY DMK +GR+PDA+TYTVLIDSLGKA
Sbjct: 363 EDMVKMGFGKDEMTYNTIIHMYGKRGQHDLAFQLYSDMKLSGRSPDAVTYTVLIDSLGKA 422
Query: 126 GKITEAADVMSGMLDAGIKPTLRTFSALICGYAKAGMRVEAE 1
I EAA+VMS ML+A +KPTLRTFSALICGYAKAG RVEAE
Sbjct: 423 NMIKEAAEVMSEMLNARVKPTLRTFSALICGYAKAGKRVEAE 464
Score = 58.5 bits (140), Expect = 5e-07
Identities = 29/86 (33%), Positives = 46/86 (53%)
Frame = -2
Query: 276 DEMTYNTMIHMYGKQGQHDLAFHLYKDMKSAGRNPDAITYTVLIDSLGKAGKITEAADVM 97
D TYN MI +YG+ G A L+KD++S G PDA+TY L+ + + G + + ++
Sbjct: 303 DLWTYNAMISVYGRCGMSREAGRLFKDLESKGFLPDAVTYNSLLYAFAREGNVDKVKEIC 362
Query: 96 SGMLDAGIKPTLRTFSALICGYAKAG 19
M+ G T++ +I Y K G
Sbjct: 363 EDMVKMGFGKDEMTYNTIIHMYGKRG 388
Score = 55.1 bits (131), Expect = 6e-06
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Frame = -2
Query: 300 MVQAGFGRDEMTYNTMIHMYGKQGQH--DLAFHLYKDMKSAGRNPDAITYTVLIDSLGKA 127
M G D +++NT+I+ K G +LA L +++ +G PD ITY LI + +
Sbjct: 223 MRSRGCEPDLVSFNTLINARLKSGTMVTNLAIELLNEVRRSGIQPDIITYNTLISACSRE 282
Query: 126 GKITEAADVMSGMLDAGIKPTLRTFSALICGYAKAGMRVEA 4
+ EA V + M+ +P L T++A+I Y + GM EA
Sbjct: 283 SNLEEAVKVYNDMVAHRCQPDLWTYNAMISVYGRCGMSREA 323
>ref|XP_003538665.1| PREDICTED: pentatricopeptide repeat-containing protein At3g18110,
chloroplastic-like [Glycine max]
Length = 1476
Score = 167 bits (424), Expect = 6e-40
Identities = 79/102 (77%), Positives = 91/102 (89%)
Frame = -2
Query: 306 EEMVQAGFGRDEMTYNTMIHMYGKQGQHDLAFHLYKDMKSAGRNPDAITYTVLIDSLGKA 127
EEMV+ GFG+DEMTYNT+IHMYGKQG+HD A +Y+DMKS+GRNPDA+TYTVLIDSLGKA
Sbjct: 415 EEMVKRGFGQDEMTYNTIIHMYGKQGRHDQAMQIYRDMKSSGRNPDAVTYTVLIDSLGKA 474
Query: 126 GKITEAADVMSGMLDAGIKPTLRTFSALICGYAKAGMRVEAE 1
K+ EAA+VMS MLDAG+KPTL T+SALIC YAKAG R EAE
Sbjct: 475 SKVEEAANVMSEMLDAGVKPTLHTYSALICAYAKAGKREEAE 516
Score = 55.5 bits (132), Expect = 4e-06
Identities = 29/91 (31%), Positives = 47/91 (51%)
Frame = -2
Query: 276 DEMTYNTMIHMYGKQGQHDLAFHLYKDMKSAGRNPDAITYTVLIDSLGKAGKITEAADVM 97
D TYN MI +YG+ + A L+K+++S G PDA+TY L+ + + G + D+
Sbjct: 355 DLWTYNAMISVYGRCARARKAEELFKELESKGFFPDAVTYNSLLYAFSREGNTEKVRDIC 414
Query: 96 SGMLDAGIKPTLRTFSALICGYAKAGMRVEA 4
M+ G T++ +I Y K G +A
Sbjct: 415 EEMVKRGFGQDEMTYNTIIHMYGKQGRHDQA 445
>ref|XP_002327945.1| predicted protein [Populus trichocarpa] gi|222837354|gb|EEE75733.1|
predicted protein [Populus trichocarpa]
Length = 1450
Score = 167 bits (424), Expect = 6e-40
Identities = 81/102 (79%), Positives = 90/102 (88%)
Frame = -2
Query: 306 EEMVQAGFGRDEMTYNTMIHMYGKQGQHDLAFHLYKDMKSAGRNPDAITYTVLIDSLGKA 127
EEMV+ GFG+DEMTYNTMIHMYGKQGQ+DLA LY+DMKS+GRNPD ITYTVLIDSLGK
Sbjct: 422 EEMVKIGFGKDEMTYNTMIHMYGKQGQNDLALQLYRDMKSSGRNPDVITYTVLIDSLGKT 481
Query: 126 GKITEAADVMSGMLDAGIKPTLRTFSALICGYAKAGMRVEAE 1
KI EAA +MS ML+ G+KPTLRT+SALICGYAKAG VEAE
Sbjct: 482 NKIEEAAGMMSEMLNTGVKPTLRTYSALICGYAKAGKPVEAE 523
Score = 58.5 bits (140), Expect = 5e-07
Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Frame = -2
Query: 300 MVQAGFGRDEMTYNTMIHMYGKQGQH--DLAFHLYKDMKSAGRNPDAITYTVLIDSLGKA 127
M + G D +++NT+I+ K G+ +LA L +++ +G PD ITY LI + +A
Sbjct: 282 MRERGCEPDLVSFNTLINARLKAGEMTPNLAIELLTEVRRSGLRPDIITYNTLISACSRA 341
Query: 126 GKITEAADVMSGMLDAGIKPTLRTFSALICGYAKAGMRVEAE 1
+ EA +V M+ +P L T++A+I Y + G+ +AE
Sbjct: 342 SNLEEAVNVFDDMVAHHCEPDLWTYNAMISVYGRCGLSGKAE 383
Score = 55.5 bits (132), Expect = 4e-06
Identities = 29/96 (30%), Positives = 48/96 (50%)
Frame = -2
Query: 306 EEMVQAGFGRDEMTYNTMIHMYGKQGQHDLAFHLYKDMKSAGRNPDAITYTVLIDSLGKA 127
++MV D TYN MI +YG+ G A L+ D++S G PDA++Y + + +
Sbjct: 352 DDMVAHHCEPDLWTYNAMISVYGRCGLSGKAEQLFNDLESRGFFPDAVSYNSFLYAFARE 411
Query: 126 GKITEAADVMSGMLDAGIKPTLRTFSALICGYAKAG 19
G + + D+ M+ G T++ +I Y K G
Sbjct: 412 GNVEKVKDICEEMVKIGFGKDEMTYNTMIHMYGKQG 447