BLASTX nr result

ID: Coptis21_contig00015047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015047
         (1551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76871.1| hypothetical protein VITISV_038835 [Vitis vinifera]    63   2e-07
ref|XP_003635220.1| PREDICTED: uncharacterized protein LOC100242...    59   3e-06

>emb|CAN76871.1| hypothetical protein VITISV_038835 [Vitis vinifera]
          Length = 1126

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 62/220 (28%), Positives = 91/220 (41%), Gaps = 18/220 (8%)
 Frame = +3

Query: 111 KRLLENGGKGGFGLDVQSYKLKRRSVSAKRDFPKGCGRFAVR-----------XXXXXXX 257
           +R LENG        V + + KRR VSA RDFP GCG  A R                  
Sbjct: 66  RRSLENGD-----CSVVTTRYKRRKVSAIRDFPPGCGPLARRMPKEAFVCVGXSEKLDGG 120

Query: 258 XXXXXXXXXXXXDVPATSLENLEPMSVDTLTVSVKPIKASNSGKEDVSKNLHRTKLSD-- 431
                       +VP T++E+  P  +    ++  P   SN     V   +  + L+   
Sbjct: 121 GKSEDALEVDGVNVPGTAVESKSPKELANSILTEMP-DTSNELHSXVQMTVMSSDLAHGI 179

Query: 432 HLSDTDEPASKDLRRNASMSE-----EKELTSSLAVKFPVDSVIPDRSVKLDISDDTKTS 596
            L   +   ++ L  +A + E     E+E +  L     V+ + P  SVK+  S      
Sbjct: 180 ELMHNEPEKTESLMSDARVFEPIKSLEQEASQILKDFHEVEEMPPPGSVKVS-SPPNGPM 238

Query: 597 VSADVLVRRTREKFLPRRRISACRDFPPGCGRIVTHANSE 716
            +  VL +   +K+ PRR+ISA RDFPP CGR     + E
Sbjct: 239 NAPSVLEKTVTKKYPPRRKISAIRDFPPFCGRNAPRLSEE 278


>ref|XP_003635220.1| PREDICTED: uncharacterized protein LOC100242100 [Vitis vinifera]
          Length = 1109

 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 58/209 (27%), Positives = 82/209 (39%), Gaps = 26/209 (12%)
 Frame = +3

Query: 168 KLKRRSVSAKRDFPKGCGRFAVR-----------XXXXXXXXXXXXXXXXXXXDVPATSL 314
           + KRR VSA RDFP GCG  A R                              +VP T++
Sbjct: 63  RYKRRKVSAIRDFPPGCGPLARRMPKEAFVCVGGSEKLDGGGKSEDALEVDGVNVPGTAV 122

Query: 315 ENLEPMSVDTLTVSVKPIKASNSGKEDVSKNLH----RTKLSDHLSDTDEPASKDLRRNA 482
           E+  P  +    ++  P         D S  LH     T +S  L+   E    +  +  
Sbjct: 123 ESKSPKELANSILTEMP---------DTSNELHSVVQMTVMSSDLAHGIELMHNEPEKTE 173

Query: 483 SM-----------SEEKELTSSLAVKFPVDSVIPDRSVKLDISDDTKTSVSADVLVRRTR 629
           S+           S E+E +  L     V+ + P  SVK+  S       +  VL +   
Sbjct: 174 SLMSDARVFEPIKSLEQEASQILKDFHEVEEMPPPGSVKVS-SPPNGPMNAPSVLEKTVT 232

Query: 630 EKFLPRRRISACRDFPPGCGRIVTHANSE 716
           +K+ PRR+ISA RDFPP CGR     + E
Sbjct: 233 KKYPPRRKISAIRDFPPFCGRNAPRLSEE 261


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