BLASTX nr result

ID: Coptis21_contig00015019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015019
         (1429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266231.1| PREDICTED: uncharacterized protein LOC100258...   217   5e-54
emb|CAN75379.1| hypothetical protein VITISV_027594 [Vitis vinife...   214   6e-53
ref|XP_002318004.1| predicted protein [Populus trichocarpa] gi|2...   201   5e-49
ref|XP_003528169.1| PREDICTED: uncharacterized protein LOC100794...   199   1e-48
ref|XP_002511488.1| conserved hypothetical protein [Ricinus comm...   190   9e-46

>ref|XP_002266231.1| PREDICTED: uncharacterized protein LOC100258784 [Vitis vinifera]
          Length = 739

 Score =  217 bits (553), Expect = 5e-54
 Identities = 145/386 (37%), Positives = 193/386 (50%), Gaps = 43/386 (11%)
 Frame = +3

Query: 6    RRREKMVAISLYRGNLHRVPDVTRRWLMPSQSISLKNFKSLLNKRQKTLSRINSNIAATS 185
            RR+ +MVAISLYRGNLHRVPDVTRRWLMP+  ISLK+F+SLL++R   LSR+ S  A TS
Sbjct: 374  RRQIEMVAISLYRGNLHRVPDVTRRWLMPTNGISLKDFRSLLSRRSAALSRLRS-AAGTS 432

Query: 186  SNPGSDEFVGDNTCSKQDEDRINDVG------------VVKDEKFVE------------- 290
            SNP     +      +++E+  N +G            V+  E+  E             
Sbjct: 433  SNPNP---ILHKVKLEKEEEPTNAIGCPARPQEEQPPKVINPEEEEEEEKPALNGKGKEG 489

Query: 291  -------------GNCGIEEERNELVDGGKDXXXXXXXXXXXXKLPSSA----VEISNNV 419
                         G  G     N +V G               K  + +    +E + NV
Sbjct: 490  KGSDGDDCVAKSVGVSGSSPGSNPIVPGNASDPADGHGNSQGEKAVAVSQNPNLEANKNV 549

Query: 420  DLPSDEEKKKNDLEQNLKVLNERKHNLVQMLKQILNTEEEIKRRNSMQASLVAPPIPQQM 599
            D  +D+EK+K ++E+ L++LN +KHNLVQ+LKQILN EEE+KRRN+MQ   + P  P  +
Sbjct: 550  DAVNDQEKRKREIEEKLQILNAKKHNLVQVLKQILNAEEELKRRNNMQGMTIRPSGPLHI 609

Query: 600  AATTDLGSNPRPAVNRAGQEANFCGDLE-GESEDVSNPNAHARHFHXXXXXXXXXXXXXX 776
              T D GS  R    R G +AN  G++E GE +D+SN N H+RH                
Sbjct: 610  DTTNDSGSLTRQVTPRLGSDANLGGEMEGGEPDDISNHNMHSRHL---LRMSSTSPSSDS 666

Query: 777  KLSNTSLQHNVVPNTNRPNLGATQTTSSMFAGVASSPSRFAPSGYQGHPANLPPLSVSGN 956
             L    +QHN VP+ +R                  SPSRFAP  +Q HPANLP +SVSG 
Sbjct: 667  PLRRPYIQHNAVPHPSR---------------ATGSPSRFAPIVHQSHPANLPTVSVSGT 711

Query: 957  HFXXXXXXXXXXXXXXVCRDARLTSP 1034
            ++              V RDARL SP
Sbjct: 712  NYIASSPSPAASGGTSVFRDARLPSP 737


>emb|CAN75379.1| hypothetical protein VITISV_027594 [Vitis vinifera]
            gi|297734055|emb|CBI15302.3| unnamed protein product
            [Vitis vinifera]
          Length = 361

 Score =  214 bits (544), Expect = 6e-53
 Identities = 143/381 (37%), Positives = 189/381 (49%), Gaps = 43/381 (11%)
 Frame = +3

Query: 21   MVAISLYRGNLHRVPDVTRRWLMPSQSISLKNFKSLLNKRQKTLSRINSNIAATSSNPGS 200
            MVAISLYRGNLHRVPDVTRRWLMP+  ISLK+F+SLL++R   LSR+ S  A TSSNP  
Sbjct: 1    MVAISLYRGNLHRVPDVTRRWLMPTNGISLKDFRSLLSRRSAALSRLRS-AAGTSSNPNP 59

Query: 201  DEFVGDNTCSKQDEDRINDVG------------VVKDEKFVE------------------ 290
               +      +++E+  N +G            V+  E+  E                  
Sbjct: 60   ---ILHKVKLEKEEEPTNAIGCPARPQEEQPPKVINPEEEEEEEKPALNGKGKEGKGSDG 116

Query: 291  --------GNCGIEEERNELVDGGKDXXXXXXXXXXXXKLPSSA----VEISNNVDLPSD 434
                    G  G     N +V G               K  + +    +E + NVD  +D
Sbjct: 117  DDCVAKSVGVSGSSPGSNPIVPGNASDPADGHGNSQGEKAVAVSQNPNLEANKNVDAVND 176

Query: 435  EEKKKNDLEQNLKVLNERKHNLVQMLKQILNTEEEIKRRNSMQASLVAPPIPQQMAATTD 614
            +EK+K ++E+ L++LN +KHNLVQ+LKQILN EEE+KRRN+MQ   + P  P  +  T D
Sbjct: 177  QEKRKREIEEKLQILNAKKHNLVQVLKQILNAEEELKRRNNMQGMTIRPSGPLHIDTTND 236

Query: 615  LGSNPRPAVNRAGQEANFCGDLE-GESEDVSNPNAHARHFHXXXXXXXXXXXXXXKLSNT 791
             GS  R    R G +AN  G++E GE +D+SN N H+RH                 L   
Sbjct: 237  SGSLTRQVTPRLGSDANLGGEMEGGEPDDISNHNMHSRHL---LRMSSTSPSSDSPLRRP 293

Query: 792  SLQHNVVPNTNRPNLGATQTTSSMFAGVASSPSRFAPSGYQGHPANLPPLSVSGNHFXXX 971
             +QHN VP+ +R                  SPSRFAP  +Q HPANLP +SVSG ++   
Sbjct: 294  YIQHNAVPHPSR---------------ATGSPSRFAPIVHQSHPANLPTVSVSGTNYIAS 338

Query: 972  XXXXXXXXXXXVCRDARLTSP 1034
                       V RDARL SP
Sbjct: 339  SPSPAASGGTSVFRDARLPSP 359


>ref|XP_002318004.1| predicted protein [Populus trichocarpa] gi|222858677|gb|EEE96224.1|
           predicted protein [Populus trichocarpa]
          Length = 353

 Score =  201 bits (510), Expect = 5e-49
 Identities = 134/348 (38%), Positives = 173/348 (49%), Gaps = 34/348 (9%)
 Frame = +3

Query: 21  MVAISLYRGNLHRVPDVTRRWLMPSQSISLKNFKSLLNKRQKTLSRINSNIAATSSNPGS 200
           MVAISLYRGNLH V DV RRWLMP+  IS ++FK+L ++R K L R+ S    T+SNP S
Sbjct: 1   MVAISLYRGNLHSVADVPRRWLMPTPKISPRDFKTLCHRRSKALCRLRST---TTSNPNS 57

Query: 201 DEFVGDNTCSKQDEDRINDVGVVKDEKFVEGNCGIEEERNELVDGGKDXXXXXXXXXXXX 380
           +            E ++  V    +E+ V  N G E E+ E   GG D            
Sbjct: 58  NHIE-----KAPIEPKLEAV----EEEIVANNNGKEAEQAEDCKGGGDGGASSSREDEKD 108

Query: 381 KLPSSAVEIS--------------NNVDLPSD-------------------EEKKKNDLE 461
            +     + S              NN+  P D                   +EK+K ++E
Sbjct: 109 DVGLDGADFSMKPADDAVNGDPNPNNLQKPDDVANNPSVETKSNANELDEEKEKRKREIE 168

Query: 462 QNLKVLNERKHNLVQMLKQILNTEEEIKRRNSMQASLVAPPIPQQMAATTDLGSNPRPAV 641
             L+VLN +KHNLV+ LKQILN EEE+KRRNS Q   V P +  Q+  + D GS  R   
Sbjct: 169 DKLQVLNAKKHNLVKALKQILNVEEELKRRNSTQGMPVRPSVQLQVDVSNDSGSMTRHPT 228

Query: 642 NRAGQEANFCGDLE-GESEDVSNPNAHARHFHXXXXXXXXXXXXXXKLSNTSLQHNVVPN 818
            R G EAN  GD+E GE+ED+SN N H+RH H                    +Q NVVP+
Sbjct: 229 PRMGSEANPGGDIEGGEAEDISNHNTHSRHVHRMSSTSPSPSSESPLRRPPYIQPNVVPH 288

Query: 819 TNRPNLGATQTTSSMFAGVASSPSRFAPSGYQGHPANLPPLSVSGNHF 962
            +R  L           G + SPSRFAP G+ GHP NLP LSVSG ++
Sbjct: 289 PSRSGL-----------GTSGSPSRFAPMGHHGHPLNLPTLSVSGTYY 325


>ref|XP_003528169.1| PREDICTED: uncharacterized protein LOC100794844 [Glycine max]
          Length = 342

 Score =  199 bits (507), Expect = 1e-48
 Identities = 134/352 (38%), Positives = 179/352 (50%), Gaps = 14/352 (3%)
 Frame = +3

Query: 21   MVAISLYRGNLHRVPDVTRRWLMPSQSISLKNFKSLLNKRQKTLSRI---NSNIAATSSN 191
            MVAISLYRGNLHRVPDV RRW MP+  I+LK+FKSLL +R K LSR+   NS      S 
Sbjct: 1    MVAISLYRGNLHRVPDVPRRWPMPAPKITLKDFKSLLARRSKALSRLQNPNSTPLPNGSQ 60

Query: 192  PGSDEFVGDN-------TCSKQDEDRINDVGVVKDEKFVEGNCGIEEERNELVDGGKDXX 350
            P     V  N       T +++D DR N+  +V      +   G + E+ +L     +  
Sbjct: 61   PEPPPTVTVNHGEGPSITVAREDGDR-NETPLVAVSSAKKPLAGSDSEKPQLDSKIDEAS 119

Query: 351  XXXXXXXXXXKLPSSAVEISNNVDLPSDEEKKKNDLEQNLKVLNERKHNLVQMLKQILNT 530
                              ++ N DL ++++K+K ++E+ L  LN+ KHNLV +LKQILN 
Sbjct: 120  EKKTSDGVAAPEEEQTEPVAENEDLLNEKKKRKKEIEEKLHGLNDNKHNLVLVLKQILNA 179

Query: 531  EEEIKRRNSMQ-ASLVAPPIPQQMAATTDLGSNPRPAVNRAGQEANFCG---DLEGESED 698
            EEE+KRRNSMQ  ++  P +P Q   T D GS  R    R G E N      D  GE +D
Sbjct: 180  EEELKRRNSMQVVAMRGPSVPLQGDGTNDTGSMIRHMPPRLGSEGNLVAADVDGGGEGDD 239

Query: 699  VSNPNAHARHFHXXXXXXXXXXXXXXKLSNTSLQHNVVPNTNRPNLGATQTTSSMFAGVA 878
             +N   H+RH                +  + S+Q NV+ + +R N+GA           A
Sbjct: 240  FANHTMHSRHVLRTSSMSPSSESTLRRTPSISIQQNVISHPSRANMGA-----------A 288

Query: 879  SSPSRFAPSGYQGHPANLPPLSVSGNHFXXXXXXXXXXXXXXVCRDARLTSP 1034
             SPSRFA SG+QG+P NLP +SVSG  +              V RDAR  SP
Sbjct: 289  GSPSRFALSGHQGNPMNLPSVSVSGTSYIASSPSPAASGGTSVFRDARQPSP 340


>ref|XP_002511488.1| conserved hypothetical protein [Ricinus communis]
            gi|223550603|gb|EEF52090.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 395

 Score =  190 bits (482), Expect = 9e-46
 Identities = 146/381 (38%), Positives = 191/381 (50%), Gaps = 38/381 (9%)
 Frame = +3

Query: 6    RRREKMVAISLYRGNLHRVPDVTRRWLMPSQSISLKNFKSLLNKRQKTLSRINSN----I 173
            R +  MVAISLYRGNLHRVPDV RRWLMP++ ISLK+FKSLL++R K LSR+ S+    +
Sbjct: 24   RGKANMVAISLYRGNLHRVPDVPRRWLMPTRQISLKDFKSLLSRRTKALSRLPSSAVTAV 83

Query: 174  AATS-----SNPGSDEFVGDNTCSKQDEDRINDVGVVKDEKFVEGNCGIEEERNELVDGG 338
            A TS      NP  +   GDN           + G  +++   EG     ++ ++L +  
Sbjct: 84   ATTSYYISNPNPTLNASTGDNNTILVASPLELEKGTNREK---EGASKEVKDHDDLSNSE 140

Query: 339  KDXXXXXXXXXXXXKLPSSAVEISNNVD------------LPSDEEKKKNDLEQNLKVLN 482
            K                +  VE  +  D              +D+EK++N++E+ L+VLN
Sbjct: 141  KPHIPEKGDAAVNHSGENLQVEKQDLEDNRNTETTCKTDLAVNDQEKRQNEVEEKLQVLN 200

Query: 483  ERKHNLVQMLKQILNTEEEIKRRNSMQASLVAPPIPQQMAATTDLGSNPRPAVNRAGQEA 662
            ++KH+LVQ+LKQILN EEE+KRRN  Q    A   P Q+  T D  S  R A  R G EA
Sbjct: 201  QKKHSLVQVLKQILNVEEELKRRNIAQGIASA---PLQVDVTNDSVSMSRHATPRMGSEA 257

Query: 663  NFCGDL--EGESEDVSNPNA--------HARHFHXXXXXXXXXXXXXXKLSNTSLQHNVV 812
            N  GD+   GE EDV N N         H+RH                K     +QHNVV
Sbjct: 258  NLGGDMMEGGEIEDVPNVNMNNNNNNYNHSRHVKRMSSTSPSSESPLRK--PPFIQHNVV 315

Query: 813  PNTNRPNLGATQTTSSMFAGVASSPSRFAPSGYQGHPAN-LPP------LSVSGNHFXXX 971
            P  +RP+L  T           SSPSRFAP+G+QG PAN LPP      +SVSG ++   
Sbjct: 316  PYPSRPSLRTT-----------SSPSRFAPTGHQGPPANVLPPVSVSVSVSVSGTNYIAS 364

Query: 972  XXXXXXXXXXXVCRDARLTSP 1034
                         RDAR  SP
Sbjct: 365  SPSPAASGGTSAFRDARQPSP 385


Top