BLASTX nr result

ID: Coptis21_contig00015003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00015003
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509442.1| Ethylene-responsive transcription factor, pu...   123   9e-26
gb|AEK82608.1| ethylene-responsive element binding protein 1 [He...   121   3e-25
ref|XP_002305121.1| AP2/ERF domain-containing transcription fact...   120   6e-25
emb|CBI30599.3| unnamed protein product [Vitis vinifera]              112   2e-22
gb|ADE41111.1| AP2 domain class transcription factor [Malus x do...   112   2e-22

>ref|XP_002509442.1| Ethylene-responsive transcription factor, putative [Ricinus communis]
            gi|223549341|gb|EEF50829.1| Ethylene-responsive
            transcription factor, putative [Ricinus communis]
          Length = 255

 Score =  123 bits (308), Expect = 9e-26
 Identities = 93/264 (35%), Positives = 116/264 (43%), Gaps = 20/264 (7%)
 Frame = -2

Query: 1056 MAPRERSNGVNKSSGAAKNNGDGT-EVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT 880
            MAPR+++  V K++G   +   G  EVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT
Sbjct: 1    MAPRDKTAAV-KANGNCNSGVPGVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT 59

Query: 879  XXXXXXXXXXXXXXXRGAKAKTNFPTPPENL--EIF---------------NNKINNAXX 751
                           RGAKAKTNFP   EN+   IF               NN  NN+  
Sbjct: 60   AEEAARAYDAAAREFRGAKAKTNFPLACENVNKNIFLSKQNDTTKVNAIANNNNNNNSNQ 119

Query: 750  XXXXXXXXXXXSREXXXXXXXXXXXXLMNRG-NGAVRFPFNQIPLTHQLXXXXXXXXXXN 574
                       SRE             +N G + AVRFPF  +P    +           
Sbjct: 120  SPSPSSTVESSSRETPALTMESSSPLDLNLGPSSAVRFPFQAVPGLGGVFTAPVVNHHQQ 179

Query: 573  PLFFFDAIIRSEKMXXXXXXXXXXQARFDPVGINYSHNQ-QFYHXXXXXXXXXXXXXXXX 397
             + +FDA+++S+            +  FDP    + H Q   +                 
Sbjct: 180  HVLYFDAMVKSQ----------YERLLFDPHQQRHQHQQAMMFGGGGVQSDSDSSSVVDL 229

Query: 396  DFNHHTSPPRRVLDLDLNFPPPPE 325
            + N   +PP R  D DLN P  PE
Sbjct: 230  NQNEINNPPPRSFDFDLNLPAEPE 253


>gb|AEK82608.1| ethylene-responsive element binding protein 1 [Hevea brasiliensis]
          Length = 243

 Score =  121 bits (304), Expect = 3e-25
 Identities = 92/263 (34%), Positives = 118/263 (44%), Gaps = 18/263 (6%)
 Frame = -2

Query: 1056 MAPRERSNGV--NKSSGAAKNNGDGTEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFD 883
            MAPR+++  V  N + GAA       EVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFD
Sbjct: 1    MAPRDKTAAVKANGNCGAAGVK----EVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFD 56

Query: 882  TXXXXXXXXXXXXXXXRGAKAKTNFPTPPENL--EIFNNKINNA---XXXXXXXXXXXXX 718
            T               RGAKAKTNFP   EN+   I  NK N+                 
Sbjct: 57   TAEEAARAYDAAAREFRGAKAKTNFPPADENVNKNIIVNKKNDTGANNHSPSPSSTVESS 116

Query: 717  SREXXXXXXXXXXXXLMNRG-NGAVRFPFNQIPLTHQLXXXXXXXXXXNPLFFFDAIIRS 541
            SRE             +N G + AVRFPF  +P    +            +F+FDA+++S
Sbjct: 117  SRETPALMMESSSPLDLNLGRSAAVRFPFQPVPAVGGVFTAPVGNHQR--VFYFDAMVKS 174

Query: 540  EKMXXXXXXXXXXQARFDPVGINYSHNQQFYHXXXXXXXXXXXXXXXXDFN--------- 388
            +               +  +  ++ + +Q  H                  +         
Sbjct: 175  Q---------------YQRLLFDHQNKRQHLHDQAMSTAGNGGGGGVQSDSDSSSVVDLN 219

Query: 387  -HHTSPPRRVLDLDLNFPPPPEV 322
             H  +PPR+ LD DLN PP PE+
Sbjct: 220  QHEINPPRKSLDFDLNLPPKPEI 242


>ref|XP_002305121.1| AP2/ERF domain-containing transcription factor [Populus trichocarpa]
            gi|222848085|gb|EEE85632.1| AP2/ERF domain-containing
            transcription factor [Populus trichocarpa]
          Length = 236

 Score =  120 bits (301), Expect = 6e-25
 Identities = 93/259 (35%), Positives = 112/259 (43%), Gaps = 13/259 (5%)
 Frame = -2

Query: 1056 MAPRERSNGVNKSSGA-AKNNGDGTEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT 880
            MAPRE++  V  S G      G G EVHFRGVRKRPWGRYAAEIRDP KKSRVWLGTFDT
Sbjct: 1    MAPREKTAAVKASGGGIVGGGGGGKEVHFRGVRKRPWGRYAAEIRDPSKKSRVWLGTFDT 60

Query: 879  XXXXXXXXXXXXXXXRGAKAKTNFPTPP-EN-----LEIFNNK----INNAXXXXXXXXX 730
                           RG+KAKTNFP P  EN     L I +NK     NN+         
Sbjct: 61   AEEAARAYDTAAREFRGSKAKTNFPYPSCENVKKNVLSIDSNKKAASKNNSGGGGGGGGN 120

Query: 729  XXXXSREXXXXXXXXXXXXLMNRGN--GAVRFPFNQIPLTHQLXXXXXXXXXXNPLFFFD 556
                S+              +N G     VR PF  + +  Q             + +FD
Sbjct: 121  NQSPSQSSTVEFCSSDAPLDLNLGPAVSTVRLPFQPMAMNQQ------------QVVYFD 168

Query: 555  AIIRSEKMXXXXXXXXXXQARFDPVGINYSHNQQFYHXXXXXXXXXXXXXXXXDFNHHTS 376
            A ++S+               FD  G ++  NQ                      +    
Sbjct: 169  AFMKSQYRRMV----------FDH-GYHHHPNQPVIFSCGGVLSDSDSSSVVDLNHQDVK 217

Query: 375  PPRRVLDLDLNFPPPPEVA 319
             PRR +DLDLN PPPPE+A
Sbjct: 218  TPRRSVDLDLNLPPPPEIA 236


>emb|CBI30599.3| unnamed protein product [Vitis vinifera]
          Length = 227

 Score =  112 bits (280), Expect = 2e-22
 Identities = 89/249 (35%), Positives = 105/249 (42%), Gaps = 3/249 (1%)
 Frame = -2

Query: 1056 MAPRERSNGVNKSSGAAKNNGDGTEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTX 877
            MAP+E+  GV  S+ A        EVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDT 
Sbjct: 1    MAPKEKVAGVKPSANAK-------EVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTA 53

Query: 876  XXXXXXXXXXXXXXRGAKAKTNFPTPPENLEIFNNKINNAXXXXXXXXXXXXXSREXXXX 697
                          RGAKAKTNFP   ENL    N  N +                    
Sbjct: 54   EEAAKAYDSAAREFRGAKAKTNFPLVSENL----NNNNQSPSQSSTVESSSREGFSPALM 109

Query: 696  XXXXXXXXLMNRGNGAVRFPFN-QIPLTHQLXXXXXXXXXXNPLFFFDAIIRSEKMXXXX 520
                     +  G G     F    P               N LF+FDA++R+ ++    
Sbjct: 110  VDSSPLDLNLLHGGGVGHHQFQVSSPSPAAGIVPTGGLPAANHLFYFDAMLRTGRV---- 165

Query: 519  XXXXXXQARFDPVGINYSHNQQFYHXXXXXXXXXXXXXXXXDFNHHTSPPRR--VLDLDL 346
                  + RFD           F                  D NH+   PR   ++DLDL
Sbjct: 166  -NQDFQRLRFDRAA------SDFRAALTGGVQSDSDSSSVVDLNHNDLKPRARVLIDLDL 218

Query: 345  NFPPPPEVA 319
            N PPPPE+A
Sbjct: 219  NRPPPPEIA 227


>gb|ADE41111.1| AP2 domain class transcription factor [Malus x domestica]
          Length = 247

 Score =  112 bits (279), Expect = 2e-22
 Identities = 60/101 (59%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = -2

Query: 1056 MAPRERSNGVNKSSGAAKNNGDGT--EVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFD 883
            MAPRE++     ++ A + NG+G   EVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFD
Sbjct: 1    MAPREKT-----ATAAVRMNGNGNVKEVHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFD 55

Query: 882  TXXXXXXXXXXXXXXXRGAKAKTNFPTPPENLEIFNNKINN 760
            T               RGAKAKTNFP P EN+ +   K NN
Sbjct: 56   TAEEAARAYDAAAIEFRGAKAKTNFPQPSENVTLNVTKNNN 96


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