BLASTX nr result
ID: Coptis21_contig00014972
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014972 (1043 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|2... 117 4e-24 emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] 82 2e-13 ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ... 80 6e-13 ref|XP_002436477.1| hypothetical protein SORBIDRAFT_10g003400 [S... 75 3e-11 ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2... 74 6e-11 >ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|222853875|gb|EEE91422.1| predicted protein [Populus trichocarpa] Length = 359 Score = 117 bits (294), Expect = 4e-24 Identities = 73/205 (35%), Positives = 114/205 (55%), Gaps = 12/205 (5%) Frame = +1 Query: 328 ENIVYIQDLLFHKGVLYGLTVCNKLFCFEFSESDQLAYKVLDTLPMK-RPESAVKANFIT 504 E + I D+ F++G LY ++ N ++ + + +A++ LDTLP+ + + + +F Sbjct: 163 ETVTIITDITFYRGKLYAMSYYNAIYICDEARDGSIAWRRLDTLPLNLKKKERGRCDF-- 220 Query: 505 NYLVESC-GELLMVYRFRNYPTEGPIEGISTVMFSIFKLQ-ESDGLLKWVPVESLGNEML 678 YLVES GELLMV R R++ T+ F +FKL E+ KWV +E++GN+++ Sbjct: 221 RYLVESNNGELLMVVRVRDHGF--------TIQFIVFKLDDETSDPAKWVRLENIGNQII 272 Query: 679 FLGKNSAMSISAEGVPGFKGNCIYFSDDCWPSF-WLAMKPR-CSDNGVFYLEDGRVDSF- 849 FLG+N + A PGF+GNC+Y+S D W F L M R +D GV+ LE + F Sbjct: 273 FLGRNHTKCVPAIDFPGFEGNCVYYSCDLWNHFRVLPMDQRDYADMGVYGLERRGKEEFF 332 Query: 850 ------FTPDDFHQVKHQPLWLIPN 906 F P+ H K+ P+W+ PN Sbjct: 333 PENYGAFMPNSEHSFKYPPIWITPN 357 >emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera] Length = 389 Score = 82.0 bits (201), Expect = 2e-13 Identities = 76/302 (25%), Positives = 128/302 (42%), Gaps = 7/302 (2%) Frame = +1 Query: 22 QQYVPRTSI--IHAMSLIEDYRHYFQKAIVSSAPGTSQYVVAARCSCEEIYETSDIIEMC 195 ++Y RTS ++ SL + + +K I+SS+P +A + +T D+ +C Sbjct: 138 REYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVI----LNQTGDLA-LC 192 Query: 196 RPHDTEWSVFGIDKEKDKNARIIRWXXXXXXXXXXXXXXXXRNQENIVYIQDLLFHKGVL 375 R D W+ ++ Y +D++FH+G+ Sbjct: 193 RKSDDSWTFL---------------------------------EDAQSYSEDVIFHRGLF 219 Query: 376 YGLTVCNKLFCFEFSESDQLAYKVLDTLPMKRPESAVKANFITNYLVESCGELLMVYRFR 555 Y + + + S S + E + YLVES ELL+V R+ Sbjct: 220 YAVNKYGSIAVCDVSGSSPRVSII---------EMPQQFGGDLQYLVESGEELLLVTRYL 270 Query: 556 NYPTEGPIEGIS----TVMFSIFKLQESDGLLKWVPVESLGNEMLFLGKNSAMSISAEGV 723 + + + S T F + +L +W V SLG+ LFLG+N ++S+S+ Sbjct: 271 DLTYDVEXDQTSLIYRTTRFQVCRLDSKAP--RWEVVSSLGDRALFLGENLSLSLSSVDF 328 Query: 724 PGFKGNCIYFSDDCWPSFWLAMKPRCSDNGVFYLEDGRVDSFFTPDDFHQVK-HQPLWLI 900 PG KGNCIY++DD + + D G+F LEDG ++ P +++ PLW+ Sbjct: 329 PGCKGNCIYYTDDYSEDNYDGIGGE-QDLGIFNLEDGSIEPL--PCSHFRIRWPPPLWVT 385 Query: 901 PN 906 PN Sbjct: 386 PN 387 >ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera] Length = 389 Score = 80.5 bits (197), Expect = 6e-13 Identities = 76/302 (25%), Positives = 128/302 (42%), Gaps = 7/302 (2%) Frame = +1 Query: 22 QQYVPRTSI--IHAMSLIEDYRHYFQKAIVSSAPGTSQYVVAARCSCEEIYETSDIIEMC 195 ++Y RTS ++ SL + + +K I+SS+P +A + +T D+ +C Sbjct: 138 REYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVI----LNQTGDLA-LC 192 Query: 196 RPHDTEWSVFGIDKEKDKNARIIRWXXXXXXXXXXXXXXXXRNQENIVYIQDLLFHKGVL 375 R D W+ ++ Y +D++FH+G+ Sbjct: 193 RKSDDSWTFL---------------------------------EDAQSYAEDVIFHRGLF 219 Query: 376 YGLTVCNKLFCFEFSESDQLAYKVLDTLPMKRPESAVKANFITNYLVESCGELLMVYRFR 555 Y + + + S S + E + YLVES ELL+V R+ Sbjct: 220 YAVNKYGSIAVCDVSGSSPRVSII---------EMPQQFGGDLQYLVESGEELLLVTRYL 270 Query: 556 NYPTEGPIEGIS----TVMFSIFKLQESDGLLKWVPVESLGNEMLFLGKNSAMSISAEGV 723 + + + S T F + +L +W V SLG+ LFLG+N ++S+S+ Sbjct: 271 DLTYDVEPDQTSLIYRTTRFQVCRLDLKAP--RWEVVSSLGDRALFLGENLSLSLSSVDF 328 Query: 724 PGFKGNCIYFSDDCWPSFWLAMKPRCSDNGVFYLEDGRVDSFFTPDDFHQVK-HQPLWLI 900 PG KGNCIY++DD + + D G+F LEDG ++ P +++ PLW+ Sbjct: 329 PGCKGNCIYYTDDYSEDNYDGIGGE-QDLGIFNLEDGSIEPL--PCSHFRIRWPPPLWVT 385 Query: 901 PN 906 PN Sbjct: 386 PN 387 >ref|XP_002436477.1| hypothetical protein SORBIDRAFT_10g003400 [Sorghum bicolor] gi|241914700|gb|EER87844.1| hypothetical protein SORBIDRAFT_10g003400 [Sorghum bicolor] Length = 351 Score = 75.1 bits (183), Expect = 3e-11 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 3/115 (2%) Frame = +1 Query: 499 ITNYLVESCGELLMVYRFRNYP---TEGPIEGISTVMFSIFKLQESDGLLKWVPVESLGN 669 I +YLVE CG LLMV R + ++GP +G TV F +F+ S +W V LG Sbjct: 208 IMSYLVECCGRLLMVIRTVEWDFALSDGPSQGDRTVAFEVFEADWSTKPGQWRCVSKLGG 267 Query: 670 EMLFLGKNSAMSISAEGVPGFKGNCIYFSDDCWPSFWLAMKPRCSDNGVFYLEDG 834 + LF+GK+ + S A G G + +CI+F D P+ LA+ P C D+GV+ + +G Sbjct: 268 QALFVGKHCSKSFPAGGCTGIQEDCIHFMHDYCPA-GLAVDPLC-DSGVYNIRNG 320 >ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1| predicted protein [Populus trichocarpa] Length = 393 Score = 73.9 bits (180), Expect = 6e-11 Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 3/136 (2%) Frame = +1 Query: 508 YLVESCGELLMVYRFRNYPTEGPIEGISTVMFSIFKLQESDGLLKWVPVESLGNEMLFLG 687 YLV S LL+V R+ + E I T F +FKL + +W V SLG+ MLF+G Sbjct: 259 YLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGP--RWERVTSLGDMMLFIG 316 Query: 688 KNSAMSISAEGVPGFKGNCIYFSDDCWPSFWLAMKPRCSDNGVFYLEDGRVDSF--FTPD 861 +NS++++SA G+ G G+CIY++DD + + D G+F L DG ++ + + Sbjct: 317 ENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGE-HDLGIFKLSDGSIEPLPCYPRN 375 Query: 862 DFHQVK-HQPLWLIPN 906 + +++ PLW+ PN Sbjct: 376 SYSRLQWPPPLWISPN 391