BLASTX nr result

ID: Coptis21_contig00014972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014972
         (1043 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|2...   117   4e-24
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    82   2e-13
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    80   6e-13
ref|XP_002436477.1| hypothetical protein SORBIDRAFT_10g003400 [S...    75   3e-11
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...    74   6e-11

>ref|XP_002307899.1| predicted protein [Populus trichocarpa] gi|222853875|gb|EEE91422.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score =  117 bits (294), Expect = 4e-24
 Identities = 73/205 (35%), Positives = 114/205 (55%), Gaps = 12/205 (5%)
 Frame = +1

Query: 328 ENIVYIQDLLFHKGVLYGLTVCNKLFCFEFSESDQLAYKVLDTLPMK-RPESAVKANFIT 504
           E +  I D+ F++G LY ++  N ++  + +    +A++ LDTLP+  + +   + +F  
Sbjct: 163 ETVTIITDITFYRGKLYAMSYYNAIYICDEARDGSIAWRRLDTLPLNLKKKERGRCDF-- 220

Query: 505 NYLVESC-GELLMVYRFRNYPTEGPIEGISTVMFSIFKLQ-ESDGLLKWVPVESLGNEML 678
            YLVES  GELLMV R R++          T+ F +FKL  E+    KWV +E++GN+++
Sbjct: 221 RYLVESNNGELLMVVRVRDHGF--------TIQFIVFKLDDETSDPAKWVRLENIGNQII 272

Query: 679 FLGKNSAMSISAEGVPGFKGNCIYFSDDCWPSF-WLAMKPR-CSDNGVFYLEDGRVDSF- 849
           FLG+N    + A   PGF+GNC+Y+S D W  F  L M  R  +D GV+ LE    + F 
Sbjct: 273 FLGRNHTKCVPAIDFPGFEGNCVYYSCDLWNHFRVLPMDQRDYADMGVYGLERRGKEEFF 332

Query: 850 ------FTPDDFHQVKHQPLWLIPN 906
                 F P+  H  K+ P+W+ PN
Sbjct: 333 PENYGAFMPNSEHSFKYPPIWITPN 357


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 76/302 (25%), Positives = 128/302 (42%), Gaps = 7/302 (2%)
 Frame = +1

Query: 22  QQYVPRTSI--IHAMSLIEDYRHYFQKAIVSSAPGTSQYVVAARCSCEEIYETSDIIEMC 195
           ++Y  RTS   ++  SL +    + +K I+SS+P      +A       + +T D+  +C
Sbjct: 138 REYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVI----LNQTGDLA-LC 192

Query: 196 RPHDTEWSVFGIDKEKDKNARIIRWXXXXXXXXXXXXXXXXRNQENIVYIQDLLFHKGVL 375
           R  D  W+                                   ++   Y +D++FH+G+ 
Sbjct: 193 RKSDDSWTFL---------------------------------EDAQSYSEDVIFHRGLF 219

Query: 376 YGLTVCNKLFCFEFSESDQLAYKVLDTLPMKRPESAVKANFITNYLVESCGELLMVYRFR 555
           Y +     +   + S S      +         E   +      YLVES  ELL+V R+ 
Sbjct: 220 YAVNKYGSIAVCDVSGSSPRVSII---------EMPQQFGGDLQYLVESGEELLLVTRYL 270

Query: 556 NYPTEGPIEGIS----TVMFSIFKLQESDGLLKWVPVESLGNEMLFLGKNSAMSISAEGV 723
           +   +   +  S    T  F + +L       +W  V SLG+  LFLG+N ++S+S+   
Sbjct: 271 DLTYDVEXDQTSLIYRTTRFQVCRLDSKAP--RWEVVSSLGDRALFLGENLSLSLSSVDF 328

Query: 724 PGFKGNCIYFSDDCWPSFWLAMKPRCSDNGVFYLEDGRVDSFFTPDDFHQVK-HQPLWLI 900
           PG KGNCIY++DD     +  +     D G+F LEDG ++    P    +++   PLW+ 
Sbjct: 329 PGCKGNCIYYTDDYSEDNYDGIGGE-QDLGIFNLEDGSIEPL--PCSHFRIRWPPPLWVT 385

Query: 901 PN 906
           PN
Sbjct: 386 PN 387


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 80.5 bits (197), Expect = 6e-13
 Identities = 76/302 (25%), Positives = 128/302 (42%), Gaps = 7/302 (2%)
 Frame = +1

Query: 22  QQYVPRTSI--IHAMSLIEDYRHYFQKAIVSSAPGTSQYVVAARCSCEEIYETSDIIEMC 195
           ++Y  RTS   ++  SL +    + +K I+SS+P      +A       + +T D+  +C
Sbjct: 138 REYALRTSSGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVI----LNQTGDLA-LC 192

Query: 196 RPHDTEWSVFGIDKEKDKNARIIRWXXXXXXXXXXXXXXXXRNQENIVYIQDLLFHKGVL 375
           R  D  W+                                   ++   Y +D++FH+G+ 
Sbjct: 193 RKSDDSWTFL---------------------------------EDAQSYAEDVIFHRGLF 219

Query: 376 YGLTVCNKLFCFEFSESDQLAYKVLDTLPMKRPESAVKANFITNYLVESCGELLMVYRFR 555
           Y +     +   + S S      +         E   +      YLVES  ELL+V R+ 
Sbjct: 220 YAVNKYGSIAVCDVSGSSPRVSII---------EMPQQFGGDLQYLVESGEELLLVTRYL 270

Query: 556 NYPTEGPIEGIS----TVMFSIFKLQESDGLLKWVPVESLGNEMLFLGKNSAMSISAEGV 723
           +   +   +  S    T  F + +L       +W  V SLG+  LFLG+N ++S+S+   
Sbjct: 271 DLTYDVEPDQTSLIYRTTRFQVCRLDLKAP--RWEVVSSLGDRALFLGENLSLSLSSVDF 328

Query: 724 PGFKGNCIYFSDDCWPSFWLAMKPRCSDNGVFYLEDGRVDSFFTPDDFHQVK-HQPLWLI 900
           PG KGNCIY++DD     +  +     D G+F LEDG ++    P    +++   PLW+ 
Sbjct: 329 PGCKGNCIYYTDDYSEDNYDGIGGE-QDLGIFNLEDGSIEPL--PCSHFRIRWPPPLWVT 385

Query: 901 PN 906
           PN
Sbjct: 386 PN 387


>ref|XP_002436477.1| hypothetical protein SORBIDRAFT_10g003400 [Sorghum bicolor]
           gi|241914700|gb|EER87844.1| hypothetical protein
           SORBIDRAFT_10g003400 [Sorghum bicolor]
          Length = 351

 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 3/115 (2%)
 Frame = +1

Query: 499 ITNYLVESCGELLMVYRFRNYP---TEGPIEGISTVMFSIFKLQESDGLLKWVPVESLGN 669
           I +YLVE CG LLMV R   +    ++GP +G  TV F +F+   S    +W  V  LG 
Sbjct: 208 IMSYLVECCGRLLMVIRTVEWDFALSDGPSQGDRTVAFEVFEADWSTKPGQWRCVSKLGG 267

Query: 670 EMLFLGKNSAMSISAEGVPGFKGNCIYFSDDCWPSFWLAMKPRCSDNGVFYLEDG 834
           + LF+GK+ + S  A G  G + +CI+F  D  P+  LA+ P C D+GV+ + +G
Sbjct: 268 QALFVGKHCSKSFPAGGCTGIQEDCIHFMHDYCPA-GLAVDPLC-DSGVYNIRNG 320


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score = 73.9 bits (180), Expect = 6e-11
 Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 3/136 (2%)
 Frame = +1

Query: 508 YLVESCGELLMVYRFRNYPTEGPIEGISTVMFSIFKLQESDGLLKWVPVESLGNEMLFLG 687
           YLV S   LL+V R+ +   E  I    T  F +FKL  +    +W  V SLG+ MLF+G
Sbjct: 259 YLVSSGDGLLLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGP--RWERVTSLGDMMLFIG 316

Query: 688 KNSAMSISAEGVPGFKGNCIYFSDDCWPSFWLAMKPRCSDNGVFYLEDGRVDSF--FTPD 861
           +NS++++SA G+ G  G+CIY++DD   + +        D G+F L DG ++    +  +
Sbjct: 317 ENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGE-HDLGIFKLSDGSIEPLPCYPRN 375

Query: 862 DFHQVK-HQPLWLIPN 906
            + +++   PLW+ PN
Sbjct: 376 SYSRLQWPPPLWISPN 391


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