BLASTX nr result

ID: Coptis21_contig00014949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014949
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332294.1| cc-nbs resistance protein [Populus trichocar...   125   3e-27
ref|XP_002332285.1| cc-nbs resistance protein [Populus trichocar...   124   6e-27
ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichoca...   122   2e-26
ref|XP_002332284.1| cc-nbs-lrr resistance protein [Populus trich...   122   4e-26
ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trich...   121   7e-26

>ref|XP_002332294.1| cc-nbs resistance protein [Populus trichocarpa]
           gi|222832456|gb|EEE70933.1| cc-nbs resistance protein
           [Populus trichocarpa]
          Length = 477

 Score =  125 bits (315), Expect = 3e-27
 Identities = 56/106 (52%), Positives = 79/106 (74%), Gaps = 2/106 (1%)
 Frame = +3

Query: 3   SEDDCWHIFRHIAFSERSEEECERLKGIGQELAKKCKGVPLAVKTLASLMRFKQAKEDWM 182
           S++ C  IF  +AF +RS++ECERL  IG ++A KCKG+PLA K L  LM+FK+ +E+W 
Sbjct: 301 SDEVCRSIFNQVAFHKRSKDECERLTEIGDKIASKCKGLPLAAKVLGGLMQFKRTREEWE 360

Query: 183 GVLESDIWKTQ--ETGFLPALLLSYHALPSVLKRCFMYCAIFPKDH 314
            VL S++W+ +  E G  P LLLSY+ LP V++RCF+YCA+FPKD+
Sbjct: 361 HVLSSELWELEHVERGLFPPLLLSYYDLPYVVRRCFLYCAMFPKDY 406


>ref|XP_002332285.1| cc-nbs resistance protein [Populus trichocarpa]
           gi|222832447|gb|EEE70924.1| cc-nbs resistance protein
           [Populus trichocarpa]
          Length = 614

 Score =  124 bits (312), Expect = 6e-27
 Identities = 56/106 (52%), Positives = 79/106 (74%), Gaps = 2/106 (1%)
 Frame = +3

Query: 3   SEDDCWHIFRHIAFSERSEEECERLKGIGQELAKKCKGVPLAVKTLASLMRFKQAKEDWM 182
           S++ C  IF  +AF +RS++ECERL  IG ++A KCKG+PLA K L  LM+ K+ +E+W 
Sbjct: 287 SDELCRSIFNQVAFHKRSKDECERLTEIGDKIANKCKGLPLAAKVLGGLMQSKRTREEWE 346

Query: 183 GVLESDIWKTQ--ETGFLPALLLSYHALPSVLKRCFMYCAIFPKDH 314
            VL S++W+ +  E G  P LLLSY+ LPSV++RCF+YCA+FPKD+
Sbjct: 347 QVLSSELWELEHVERGIFPPLLLSYYDLPSVVRRCFLYCAMFPKDY 392


>ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859577|gb|EEE97124.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 799

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/106 (52%), Positives = 78/106 (73%), Gaps = 2/106 (1%)
 Frame = +3

Query: 3   SEDDCWHIFRHIAFSERSEEECERLKGIGQELAKKCKGVPLAVKTLASLMRFKQAKEDWM 182
           S++ C  IF H+AF ERS++E ERL  IG+++A KCKG+PLA K L  LM+FK+ +E+W 
Sbjct: 244 SDEICRSIFNHVAFQERSKDERERLTDIGEKIASKCKGLPLAAKVLGGLMQFKRTREEWE 303

Query: 183 GVLESDIWKTQ--ETGFLPALLLSYHALPSVLKRCFMYCAIFPKDH 314
            VL S++W+ +  E    P LLLSY+ LP V +RCF+YCA+FPKD+
Sbjct: 304 RVLSSELWELEHVERRLFPPLLLSYYDLPYVERRCFLYCAMFPKDY 349


>ref|XP_002332284.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832446|gb|EEE70923.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 742

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/112 (52%), Positives = 79/112 (70%), Gaps = 8/112 (7%)
 Frame = +3

Query: 3   SEDDCWHIFRHIAFSERSEEECERLKGIGQELAKKCKGVPLAVKTLASLMRFKQAKEDWM 182
           S++ C  IF H+AF ERS++E ERL  IG ++A KCKG+PLA K L  LM+FK+ +E+W 
Sbjct: 308 SDEICRSIFNHVAFQERSKDERERLTDIGDKIANKCKGLPLAAKVLGGLMQFKRTREEWE 367

Query: 183 GVLESDIWKTQETG--------FLPALLLSYHALPSVLKRCFMYCAIFPKDH 314
            VL S++W   E          FLP LLLSY+ LPSV++RCF+YCA+FPKD+
Sbjct: 368 RVLSSELWGLDEVDRDQVERGIFLP-LLLSYYDLPSVVRRCFLYCAMFPKDY 418


>ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859580|gb|EEE97127.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 945

 Score =  121 bits (303), Expect = 7e-26
 Identities = 58/112 (51%), Positives = 79/112 (70%), Gaps = 8/112 (7%)
 Frame = +3

Query: 3   SEDDCWHIFRHIAFSERSEEECERLKGIGQELAKKCKGVPLAVKTLASLMRFKQAKEDWM 182
           S++ C  IF H+AF ERSE+E ERL  IG ++A KCKG+PLA K L  LM+ K+ +E+W 
Sbjct: 334 SDEICRSIFNHVAFQERSEDERERLTDIGDKIANKCKGLPLAAKVLGGLMQSKRTREEWE 393

Query: 183 GVLESDIWKTQETG--------FLPALLLSYHALPSVLKRCFMYCAIFPKDH 314
            VL S++W+  E          F+P LLLSY+ LPSV++RCF+YCA+FPKD+
Sbjct: 394 RVLSSELWRLDEVDRDQVESRIFIP-LLLSYYDLPSVVRRCFLYCAMFPKDY 444


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