BLASTX nr result

ID: Coptis21_contig00014929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014929
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278506.1| PREDICTED: uncharacterized protein LOC100267...    96   1e-17
emb|CAN83757.1| hypothetical protein VITISV_028373 [Vitis vinifera]    94   3e-17
gb|ABC01887.1| unknown [Solanum tuberosum]                             83   6e-14
ref|XP_002304352.1| predicted protein [Populus trichocarpa] gi|1...    80   4e-13
ref|XP_002528544.1| conserved hypothetical protein [Ricinus comm...    79   9e-13

>ref|XP_002278506.1| PREDICTED: uncharacterized protein LOC100267682 [Vitis vinifera]
          Length = 147

 Score = 95.5 bits (236), Expect = 1e-17
 Identities = 66/152 (43%), Positives = 79/152 (51%), Gaps = 18/152 (11%)
 Frame = +2

Query: 116 MQRQSLGSPGSKLNIHXXXXXXXXXXXXXXXXXXXXX----------LTYNHSTKFRAEK 265
           MQRQSLGSP SKL+IH                               L    S+    +K
Sbjct: 1   MQRQSLGSPSSKLHIHGGGGGGAKEEILKAEKDLNQSQNDDEADHKSLKPLRSSSSPPDK 60

Query: 266 SIHLIPLLTVFCFLILYLVSHDPLQQELVHINGFKRPS--------IVNLDRVLEIKKSD 421
            IHLIPLL +FCFL+LYL SHDP   EL   +GFK+ S        I +L+R   + KSD
Sbjct: 61  LIHLIPLLMLFCFLLLYLFSHDPSHSELAQFDGFKKRSSKLTDSNEIADLERF--VVKSD 118

Query: 422 VLAIRSYRSLQEIKKKGNKTRGLILHRKMGDF 517
           V +IRS R+LQEI     K+R   LHRKMGDF
Sbjct: 119 VFSIRSLRNLQEIGTYAPKSR---LHRKMGDF 147


>emb|CAN83757.1| hypothetical protein VITISV_028373 [Vitis vinifera]
          Length = 150

 Score = 94.4 bits (233), Expect = 3e-17
 Identities = 66/155 (42%), Positives = 79/155 (50%), Gaps = 21/155 (13%)
 Frame = +2

Query: 116 MQRQSLGSPGSKLNIHXXXXXXXXXXXXXXXXXXXXX-------------LTYNHSTKFR 256
           MQRQSLGSP SKL+IH                                  L    S+   
Sbjct: 1   MQRQSLGSPSSKLHIHGGGGGGGGGAKEEILKAEKDLNQSQNDDEADHKSLKPLRSSSSP 60

Query: 257 AEKSIHLIPLLTVFCFLILYLVSHDPLQQELVHINGFKRPS--------IVNLDRVLEIK 412
            +K IHLIPLL +FCFL+LYL SHDP   EL   +GFK+ S        I +L+R   + 
Sbjct: 61  PDKLIHLIPLLMLFCFLLLYLFSHDPSHSELAQFDGFKKRSSKLTDSNEIADLERF--VV 118

Query: 413 KSDVLAIRSYRSLQEIKKKGNKTRGLILHRKMGDF 517
           KSDV +IRS R+LQEI     K+R   LHRKMGDF
Sbjct: 119 KSDVFSIRSLRNLQEIGTYAPKSR---LHRKMGDF 150


>gb|ABC01887.1| unknown [Solanum tuberosum]
          Length = 167

 Score = 83.2 bits (204), Expect = 6e-14
 Identities = 50/95 (52%), Positives = 59/95 (62%), Gaps = 7/95 (7%)
 Frame = +2

Query: 254 RAEKSIHLIPLLTVFCFLILYLVSHDPLQQELVHINGF----KRPSIVNLD---RVLEIK 412
           RAEK IHLIP+LT  CF ILYL SH P  ++L    GF    KR    N+D   RVLEI+
Sbjct: 76  RAEKYIHLIPVLTFLCFFILYLFSHSPSDKDLAQFQGFEGFTKRIESANIDELHRVLEIE 135

Query: 413 KSDVLAIRSYRSLQEIKKKGNKTRGLILHRKMGDF 517
              VLAIRS R+LQEI ++  K R    HRK+ DF
Sbjct: 136 NPPVLAIRSTRNLQEINRQDAKHR---RHRKLADF 167


>ref|XP_002304352.1| predicted protein [Populus trichocarpa] gi|118484537|gb|ABK94143.1|
           unknown [Populus trichocarpa]
           gi|222841784|gb|EEE79331.1| predicted protein [Populus
           trichocarpa]
          Length = 170

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 9/95 (9%)
 Frame = +2

Query: 260 EKSIHLIPLLTVFCFLILYLVSHDPLQQELVHINGFKR---------PSIVNLDRVLEIK 412
           EK IHLIP LT+FCFL+L+LVSH+P Q +L   NGFKR          S+ ++  +  ++
Sbjct: 76  EKLIHLIPFLTLFCFLVLFLVSHNPSQADLAQFNGFKRVSNHIEEAIESVGDVSGLSAVR 135

Query: 413 KSDVLAIRSYRSLQEIKKKGNKTRGLILHRKMGDF 517
           + DVLA+RS+R+LQEI         +  HRK   F
Sbjct: 136 RGDVLAVRSFRNLQEIAADKRAPLKVRSHRKFAHF 170


>ref|XP_002528544.1| conserved hypothetical protein [Ricinus communis]
           gi|223532046|gb|EEF33856.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 173

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
 Frame = +2

Query: 254 RAEKSIHLIPLLTVFCFLILYLVSHDPLQQELVHINGFKRPS-------IVNLDRV-LEI 409
           + EK +H IPLLT+ CFL+LYLVSH P Q +L   NGFK+ S       I ++DR   +I
Sbjct: 77  KPEKLVHFIPLLTLLCFLVLYLVSHTPSQSDLAQFNGFKQSSKHIDENEIGDVDRFGSDI 136

Query: 410 KKSDVLAIRSYRSLQEIKKKGNKTRGLILHRKM 508
           ++ D LAIR+  +LQEI  K   ++  I HRK+
Sbjct: 137 RRGDALAIRNLMNLQEIADKRASSKSRIYHRKI 169


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