BLASTX nr result

ID: Coptis21_contig00014922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014922
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518274.1| conserved hypothetical protein [Ricinus comm...   108   6e-22
emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]    93   2e-17
ref|XP_002517741.1| conserved hypothetical protein [Ricinus comm...    85   5e-15
tpg|DAA47075.1| TPA: hypothetical protein ZEAMMB73_027346 [Zea m...    64   1e-08
ref|XP_002535828.1| conserved hypothetical protein [Ricinus comm...    64   1e-08

>ref|XP_002518274.1| conserved hypothetical protein [Ricinus communis]
           gi|223542494|gb|EEF44034.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 431

 Score =  108 bits (269), Expect = 6e-22
 Identities = 57/79 (72%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
 Frame = +3

Query: 231 YPILESSAELYPARISF*-RGPKKCLHLLPTVFLRNYTERVDPPLPFVLATYPKVSSPRA 407
           YPILE SA L PA   F  + PKK LHLLPTVFL+N  ERVDPP  FVLATYPKVSS R 
Sbjct: 6   YPILEPSAGLNPAPPHFLLKRPKKGLHLLPTVFLQNLIERVDPPPHFVLATYPKVSSLRV 65

Query: 408 PRRRQSNQPACCGGAAFLF 464
           PRRRQ NQP CCGGA F F
Sbjct: 66  PRRRQKNQPVCCGGALFFF 84


>emb|CAN71467.1| hypothetical protein VITISV_038988 [Vitis vinifera]
          Length = 280

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/45 (97%), Positives = 44/45 (97%)
 Frame = +1

Query: 376 QLILRSPRQELPGDDRATNPPAVAGRLFCFTIRPGRLSLPSVAYE 510
           QLILRSPRQELPGDDR TNPPAVAGRLFCFTIRPGRLSLPSVAYE
Sbjct: 135 QLILRSPRQELPGDDRGTNPPAVAGRLFCFTIRPGRLSLPSVAYE 179


>ref|XP_002517741.1| conserved hypothetical protein [Ricinus communis]
           gi|223543139|gb|EEF44673.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 111

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 45/63 (71%), Positives = 48/63 (76%)
 Frame = -1

Query: 459 KKPPRHSRRVGCSVVAGELLARRP*DKLLKQTGGEDRPVQYNSEERLLAAGGDISLAPFK 280
           K  P HSRRVG S+VAG+LL RRP    LKQ G EDRPVQ N EERLLA GGD+SLA FK
Sbjct: 37  KIAPHHSRRVGSSIVAGQLLVRRP--YFLKQKGEEDRPVQSNFEERLLAVGGDLSLALFK 94

Query: 279 RKC 271
           RKC
Sbjct: 95  RKC 97


>tpg|DAA47075.1| TPA: hypothetical protein ZEAMMB73_027346 [Zea mays]
          Length = 88

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/28 (96%), Positives = 27/28 (96%)
 Frame = -2

Query: 362 EGRIDPFSIIPKKDCWQQVETFLWPPSK 279
           EGRIDPFS IPKKDCWQQVETFLWPPSK
Sbjct: 61  EGRIDPFSRIPKKDCWQQVETFLWPPSK 88


>ref|XP_002535828.1| conserved hypothetical protein [Ricinus communis]
           gi|255608154|ref|XP_002538850.1| conserved hypothetical
           protein [Ricinus communis] gi|223510119|gb|EEF23533.1|
           conserved hypothetical protein [Ricinus communis]
           gi|223521805|gb|EEF26555.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 86

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 34/51 (66%), Positives = 35/51 (68%)
 Frame = -3

Query: 367 NGRGGSTRSV*FRRKTVGSRWRHFFGPLQKEMRAG*SSAEDSRIG*VGSCP 215
           +G GGSTRSV FRRKTVGSRWR FFGPLQKEMR             VGSCP
Sbjct: 36  DGGGGSTRSVKFRRKTVGSRWRPFFGPLQKEMRGRGVKLGRGFENRVGSCP 86


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