BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014917
         (1457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280903.2| PREDICTED: APO protein 3, mitochondrial-like...   504   e-140
ref|XP_002511090.1| translation factor sui1, putative [Ricinus c...   479   e-133
ref|XP_002866462.1| hypothetical protein ARALYDRAFT_496364 [Arab...   462   e-127
ref|NP_568945.2| APO protein 3 [Arabidopsis thaliana] gi|1865326...   454   e-125
ref|XP_002454004.1| hypothetical protein SORBIDRAFT_04g022910 [S...   447   e-123

>ref|XP_002280903.2| PREDICTED: APO protein 3, mitochondrial-like [Vitis vinifera]
            gi|297733881|emb|CBI15128.3| unnamed protein product
            [Vitis vinifera]
          Length = 418

 Score =  504 bits (1299), Expect = e-140
 Identities = 257/425 (60%), Positives = 307/425 (72%), Gaps = 15/425 (3%)
 Frame = -2

Query: 1414 MHRRVASQIFSIDRFCSFQFKHNSSFLAFSRTLTLDANGVFDPLYTDVPNPSKRKSDRKP 1235
            M RR+ SQ FS  +    Q      F A  RTLTL   GV DPLY DVP P +RKS+RKP
Sbjct: 1    MQRRIISQ-FSYSKRVHCQLSP-IFFFASRRTLTLGGEGVDDPLYADVPRPCRRKSERKP 58

Query: 1234 YPTPMKFLIXXXXXXXXXXXXEPCKILENAPENGLLVPELVQVAQQVYRARESLLHGLSK 1055
            YPTPMK LI            +P ++LE+ P+NGLLVPEL+ VA QVY+A++SLL GL K
Sbjct: 59   YPTPMKILIRRAKEEKEARKAQPSRVLEDPPDNGLLVPELIGVAHQVYQAQQSLLLGLRK 118

Query: 1054 LVDIIIPVKRCRFCSEVHIGNVGHEIRTCSGPKSGFRSAVHVWKKGRIEDVILFPECFHL 875
            L+D+I PV+RCRFC EVHIG++GHEIRTC+GPKSGFRS+ HVW+KGR+ED + FP+CFHL
Sbjct: 119  LIDVI-PVQRCRFCFEVHIGHMGHEIRTCTGPKSGFRSSKHVWRKGRVEDAVYFPKCFHL 177

Query: 874  FDRVGKPRILHDERSRVPRIPAVVELCIQAGVNLKDYHTKRRTKPVYSMEGRIVDFE--- 704
             DRVGKPR++HDER  + RIPA++ELCIQAGV+L+ Y TKRR +PVY +EGRIVDFE   
Sbjct: 178  CDRVGKPRVVHDERFNIKRIPAILELCIQAGVDLEKYPTKRRARPVYCIEGRIVDFEPET 237

Query: 703  -----------SDMKNVDCHLESNXXXXXXXXXXXXXXXXXXDSLL-IASKVLKFWFEMR 560
                       SD+      +E N                   SL  +++  L+ WFEM 
Sbjct: 238  EKDEMRRNVEASDLGTKTEEMERNSNSHNPSHFLTHSNNGEEKSLKELSTTTLESWFEMI 297

Query: 559  SGAKKLMDKYQVQTCGYCPEVQVGPKGHKVRMCRASKHQSRNGMHAWQEATLDDFIGPNY 380
            SGAKK+M+KY V+TCGYCPEVQVGPKGHKVRMC+ASKHQSRNG+HAWQEAT+DD +GPNY
Sbjct: 298  SGAKKIMEKYSVKTCGYCPEVQVGPKGHKVRMCKASKHQSRNGLHAWQEATIDDLVGPNY 357

Query: 379  VWHVRDDVRLSPNGLLVNELKRYYGKAPAVVELCVQAGAPVPDEYRSMMRLDVVPPAPDE 200
            VWHV+D  R +    L N LKRYYGKAPAVVELCVQ GA +PD+YRSMMRLDVVPP  DE
Sbjct: 358  VWHVQDQNRPA----LDNSLKRYYGKAPAVVELCVQGGASIPDQYRSMMRLDVVPPDRDE 413

Query: 199  VDLVA 185
            VDLVA
Sbjct: 414  VDLVA 418


>ref|XP_002511090.1| translation factor sui1, putative [Ricinus communis]
            gi|223550205|gb|EEF51692.1| translation factor sui1,
            putative [Ricinus communis]
          Length = 414

 Score =  479 bits (1234), Expect = e-133
 Identities = 241/397 (60%), Positives = 292/397 (73%), Gaps = 13/397 (3%)
 Frame = -2

Query: 1336 LAFS--RTLTLDANGVFDPLYTDVPNPSKRKSDRKPYPTPMKFLIXXXXXXXXXXXXEPC 1163
            L FS  R+LTL      +PLY D+P P +  S+RKPYPTP+K LI            +PC
Sbjct: 23   LCFSSGRSLTLIGAQADNPLYADIPKPRRDTSERKPYPTPIKVLIQRAKQEREARKVQPC 82

Query: 1162 KILENAPENGLLVPELVQVAQQVYRARESLLHGLSKLVDIIIPVKRCRFCSEVHIGNVGH 983
            ++LE+ P+NGLLVPELV+VA +VYRAR+SLL GLSKLV ++ PV+RCRFCSEVHIG+VGH
Sbjct: 83   RVLEHPPDNGLLVPELVEVAHRVYRARQSLLFGLSKLVKVV-PVQRCRFCSEVHIGHVGH 141

Query: 982  EIRTCSGPKSGFRSAVHVWKKGRIEDVILFPECFHLFDRVGKPRILHDERSRVPRIPAVV 803
            EIRTC+GP SG R+A HVW++G + DV+ FP+CFHL+DRVGKPR+ HDER  VPRIPA++
Sbjct: 142  EIRTCTGPGSGKRTATHVWREGGVHDVVFFPKCFHLYDRVGKPRVGHDERHSVPRIPAIL 201

Query: 802  ELCIQAGVNLKDYHTKRRTKPVYSMEGRIVDFESDMKNVDC----HLESNXXXXXXXXXX 635
            ELCIQAGVNL  + T+RRTKPVYS+EGRIVDFE      D     H E+           
Sbjct: 202  ELCIQAGVNLDKFPTRRRTKPVYSIEGRIVDFEQVANKYDMSEKFHSENIDPLVDYSSGT 261

Query: 634  XXXXXXXXDSLLIASKV-------LKFWFEMRSGAKKLMDKYQVQTCGYCPEVQVGPKGH 476
                      L +++++       ++ WFEM SGAK +M+KY V TCGYCPEVQVGPKGH
Sbjct: 262  RDDKVTTHLKLEVSNELGDVSIGTMESWFEMISGAKNIMEKYSVLTCGYCPEVQVGPKGH 321

Query: 475  KVRMCRASKHQSRNGMHAWQEATLDDFIGPNYVWHVRDDVRLSPNGLLVNELKRYYGKAP 296
            KVRMC+ +KHQ+R+G HAWQEAT++D +GPNYVWHV+ DV   P   L N LKRYYGKAP
Sbjct: 322  KVRMCKGTKHQARDGQHAWQEATIEDLVGPNYVWHVQ-DVNGPP---LDNNLKRYYGKAP 377

Query: 295  AVVELCVQAGAPVPDEYRSMMRLDVVPPAPDEVDLVA 185
            AVVELCV AGAPVPD+YRSMMRLDVVPP  DEVDLVA
Sbjct: 378  AVVELCVHAGAPVPDQYRSMMRLDVVPPNRDEVDLVA 414


>ref|XP_002866462.1| hypothetical protein ARALYDRAFT_496364 [Arabidopsis lyrata subsp.
            lyrata] gi|297312297|gb|EFH42721.1| hypothetical protein
            ARALYDRAFT_496364 [Arabidopsis lyrata subsp. lyrata]
          Length = 400

 Score =  462 bits (1188), Expect = e-127
 Identities = 225/370 (60%), Positives = 276/370 (74%), Gaps = 1/370 (0%)
 Frame = -2

Query: 1291 DPLYTDVPNPSKRKSDRKPYPTPMKFLIXXXXXXXXXXXXEPCKILENAPENGLLVPELV 1112
            DPLY DVP P K KS+RKPYPTPMK LI            +PC++LE+ P+NG+LVPELV
Sbjct: 37   DPLYADVPKPRKDKSERKPYPTPMKELIRRAKEEKQLRKLQPCRVLEDPPDNGILVPELV 96

Query: 1111 QVAQQVYRARESLLHGLSKLVDIIIPVKRCRFCSEVHIGNVGHEIRTCSGPKSGFRSAVH 932
             VA  V+R R SLL GLSK++  + PV RCR CSEVHIG  GHEIRTC+GP SG RSA H
Sbjct: 97   DVAHCVHRCRNSLLSGLSKIIHHV-PVHRCRLCSEVHIGKQGHEIRTCTGPGSGSRSATH 155

Query: 931  VWKKGRIEDVILFPECFHLFDRVGKPRILHDERSRVPRIPAVVELCIQAGVNLKDYHTKR 752
            VWK+GR  DV+LFP+CFHL+DR  KPR++HDER  VP+I AV+ELCIQAGV+L+ + +KR
Sbjct: 156  VWKRGRASDVVLFPKCFHLYDRAVKPRVIHDERFTVPKISAVLELCIQAGVDLEKFPSKR 215

Query: 751  RTKPVYSMEGRIVDFES-DMKNVDCHLESNXXXXXXXXXXXXXXXXXXDSLLIASKVLKF 575
            R+KPVYS+EGRIVDFE  + +N +  + S                     L I  + ++ 
Sbjct: 216  RSKPVYSIEGRIVDFEDVNCENSEIAVTSTTTLLQEDDCCKEEKKKSLKELSI--ETMES 273

Query: 574  WFEMRSGAKKLMDKYQVQTCGYCPEVQVGPKGHKVRMCRASKHQSRNGMHAWQEATLDDF 395
            WFEM SG +KL+++Y+V TCGYCPE+QVGPKGHKVRMC+A+KHQ R+GMHAWQEAT+DD 
Sbjct: 274  WFEMVSGVRKLIERYKVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGMHAWQEATIDDV 333

Query: 394  IGPNYVWHVRDDVRLSPNGLLVNELKRYYGKAPAVVELCVQAGAPVPDEYRSMMRLDVVP 215
            +GPNYVWHVRD    +   +L N LKR+YGKAPAVVE+CVQ GAP+PD+Y+SMMRLDVV 
Sbjct: 334  VGPNYVWHVRDP---TDGSVLDNSLKRFYGKAPAVVEMCVQGGAPIPDQYKSMMRLDVVY 390

Query: 214  PAPDEVDLVA 185
            P  DEVDLVA
Sbjct: 391  PQRDEVDLVA 400


>ref|NP_568945.2| APO protein 3 [Arabidopsis thaliana] gi|186532654|ref|NP_001119475.1|
            APO protein 3 [Arabidopsis thaliana]
            gi|68565076|sp|Q9FH50.1|APO3_ARATH RecName: Full=APO
            protein 3, mitochondrial; Flags: Precursor
            gi|9758392|dbj|BAB08879.1| unnamed protein product
            [Arabidopsis thaliana] gi|332010155|gb|AED97538.1| APO
            protein 3 [Arabidopsis thaliana]
            gi|332010156|gb|AED97539.1| APO protein 3 [Arabidopsis
            thaliana]
          Length = 402

 Score =  454 bits (1169), Expect = e-125
 Identities = 222/369 (60%), Positives = 272/369 (73%)
 Frame = -2

Query: 1291 DPLYTDVPNPSKRKSDRKPYPTPMKFLIXXXXXXXXXXXXEPCKILENAPENGLLVPELV 1112
            DPLY DVP P K KS+RKPYPTPMK LI            +PC++LE+ P+NGLLVPELV
Sbjct: 40   DPLYADVPKPPKDKSERKPYPTPMKELIRRAKEEKQLRKLQPCRVLEDPPDNGLLVPELV 99

Query: 1111 QVAQQVYRARESLLHGLSKLVDIIIPVKRCRFCSEVHIGNVGHEIRTCSGPKSGFRSAVH 932
             VA  V+R R  LL GLSK++  + PV RCR C+EVHIG  GHEIRTC+GP SG RSA H
Sbjct: 100  DVAHCVHRCRNMLLSGLSKIIHHV-PVHRCRLCAEVHIGKQGHEIRTCTGPGSGSRSATH 158

Query: 931  VWKKGRIEDVILFPECFHLFDRVGKPRILHDERSRVPRIPAVVELCIQAGVNLKDYHTKR 752
            VWK+GR+ DV+LFP+CFHL+DR  KPR++HDER  VP+I AV+ELCIQAGV+L+ + +KR
Sbjct: 159  VWKRGRVSDVVLFPKCFHLYDRAVKPRVIHDERFTVPKISAVLELCIQAGVDLEKFPSKR 218

Query: 751  RTKPVYSMEGRIVDFESDMKNVDCHLESNXXXXXXXXXXXXXXXXXXDSLLIASKVLKFW 572
            R+KPVYS+EGRIVDFE D+ + +  L                        L + + ++ W
Sbjct: 219  RSKPVYSIEGRIVDFE-DVNDGNSELAVTSTTTLIQEDDRCKEEKKSLKEL-SFETMESW 276

Query: 571  FEMRSGAKKLMDKYQVQTCGYCPEVQVGPKGHKVRMCRASKHQSRNGMHAWQEATLDDFI 392
            FEM  G +KLM++Y+V TCGYCPE+QVGPKGHKVRMC+A+KHQ R+GMHAWQEAT+DD +
Sbjct: 277  FEMVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGMHAWQEATIDDVV 336

Query: 391  GPNYVWHVRDDVRLSPNGLLVNELKRYYGKAPAVVELCVQAGAPVPDEYRSMMRLDVVPP 212
            GP YVWHVRD    +   +L N LKR+YGKAPAV+E+CVQ GAPVPD+Y SMMRLDVV P
Sbjct: 337  GPTYVWHVRDP---TDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNSMMRLDVVYP 393

Query: 211  APDEVDLVA 185
              DEVDLVA
Sbjct: 394  QRDEVDLVA 402


>ref|XP_002454004.1| hypothetical protein SORBIDRAFT_04g022910 [Sorghum bicolor]
            gi|241933835|gb|EES06980.1| hypothetical protein
            SORBIDRAFT_04g022910 [Sorghum bicolor]
          Length = 423

 Score =  447 bits (1149), Expect = e-123
 Identities = 226/372 (60%), Positives = 268/372 (72%), Gaps = 6/372 (1%)
 Frame = -2

Query: 1282 YTDVPNPSKRKSDRKPYPTPMKFLIXXXXXXXXXXXXEPCKILENAPENGLLVPELVQVA 1103
            Y DVP P  RK +RKPY TPMK LI             PC++LE+ P+NGL+VP LV VA
Sbjct: 54   YVDVPRPG-RKWERKPYVTPMKVLIRRAKEERQARRESPCRVLEHPPDNGLVVPHLVDVA 112

Query: 1102 QQVYRARESLLHGLSKLVDI--IIPVKRCRFCSEVHIGNVGHEIRTCSGPKSGFRSAVHV 929
            ++V+ ARE LL GL++LV+    IPVKRCRFCSEVHIG VGHEIRTC G  SG R+++HV
Sbjct: 113  RRVHAAREGLLGGLTRLVEGEGAIPVKRCRFCSEVHIGRVGHEIRTCEGRNSGARNSLHV 172

Query: 928  WKKGRIEDVILFPECFHLFDRVGKPRILHDERSRVPRIPAVVELCIQAGVNLKDYHTKRR 749
            W+ G + DV+ FP C+HLFDRVGKPR++H E+  VPR+PAV+ELCIQAGV++  Y TKRR
Sbjct: 173  WRPGTVRDVVGFPYCYHLFDRVGKPRVVHKEKYDVPRLPAVMELCIQAGVDVPRYPTKRR 232

Query: 748  TKPVYSMEGRIVDFESDMKNVDCHLESNXXXXXXXXXXXXXXXXXXDSLL----IASKVL 581
            T+PVYS+EGRIVDFE D +      E                    +S +    +AS+ L
Sbjct: 233  TRPVYSIEGRIVDFEPDDEAAGTSPEPPACTPLLPPAAGVVNGEGEESEITVPELASRTL 292

Query: 580  KFWFEMRSGAKKLMDKYQVQTCGYCPEVQVGPKGHKVRMCRASKHQSRNGMHAWQEATLD 401
            + W +MRSGA +LM KY V TCGYCP+VQVGPKGHKVRMCRA+KHQ R+G HAWQEAT+D
Sbjct: 293  QSWLDMRSGAARLMKKYSVHTCGYCPDVQVGPKGHKVRMCRATKHQQRDGQHAWQEATVD 352

Query: 400  DFIGPNYVWHVRDDVRLSPNGLLVNELKRYYGKAPAVVELCVQAGAPVPDEYRSMMRLDV 221
            D + PNYVWHV D      +  L NELKRYYGKAPAVVELCVQAGAPVP  YRSMMRLDV
Sbjct: 353  DLVPPNYVWHVADPAG-DESLPLANELKRYYGKAPAVVELCVQAGAPVPAAYRSMMRLDV 411

Query: 220  VPPAPDEVDLVA 185
            VPPA DE DLVA
Sbjct: 412  VPPARDEYDLVA 423