BLASTX nr result

ID: Coptis21_contig00014913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014913
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301843.1| predicted protein [Populus trichocarpa] gi|2...    74   9e-12
gb|ABK94679.1| unknown [Populus trichocarpa]                           74   9e-12
ref|XP_002321296.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002271401.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...    74   2e-11
ref|XP_004140669.1| PREDICTED: ABC transporter C family member 5...    73   2e-11

>ref|XP_002301843.1| predicted protein [Populus trichocarpa] gi|222843569|gb|EEE81116.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -1

Query: 209 ALTFENLGITPRTLKGYPIEFLFSYRKGGPEFGSTVSERVSTES 78
           ALTF +LGI P  LKGYPIEFL SYRKGGP+FGST+SERVS +S
Sbjct: 354 ALTFNDLGIVPHKLKGYPIEFLISYRKGGPQFGSTISERVSPDS 397


>gb|ABK94679.1| unknown [Populus trichocarpa]
          Length = 399

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = -1

Query: 209 ALTFENLGITPRTLKGYPIEFLFSYRKGGPEFGSTVSERVSTES 78
           ALTF +LGI P  LKGYPIEFL SYRKGGP+FGST+SERVS +S
Sbjct: 354 ALTFNDLGIVPHKLKGYPIEFLISYRKGGPQFGSTISERVSPDS 397


>ref|XP_002321296.1| predicted protein [Populus trichocarpa] gi|222862069|gb|EEE99611.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = -1

Query: 209 ALTFENLGITPRTLKGYPIEFLFSYRKGGPEFGSTVSERVSTES 78
           ALTF +LGI P  LKGYP+EFL SYRKGGP+FGST+SERVS +S
Sbjct: 349 ALTFSDLGIVPHKLKGYPVEFLISYRKGGPQFGSTISERVSPDS 392


>ref|XP_002271401.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex
           subunit 9, mitochondrial [Vitis vinifera]
           gi|297744229|emb|CBI37199.3| unnamed protein product
           [Vitis vinifera]
          Length = 399

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = -1

Query: 209 ALTFENLGITPRTLKGYPIEFLFSYRKGGPEFGSTVSERVSTES 78
           ALTF++LGI P  LKGYPIEFL SYRKGGP+FGST+SERV  E+
Sbjct: 354 ALTFDDLGIVPHKLKGYPIEFLLSYRKGGPQFGSTISERVDPEA 397


>ref|XP_004140669.1| PREDICTED: ABC transporter C family member 5-like [Cucumis sativus]
            gi|449487419|ref|XP_004157617.1| PREDICTED: ABC
            transporter C family member 5-like [Cucumis sativus]
          Length = 1752

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/44 (75%), Positives = 38/44 (86%)
 Frame = -1

Query: 209  ALTFENLGITPRTLKGYPIEFLFSYRKGGPEFGSTVSERVSTES 78
            ALTF +LGI P  LKGYP+EFL SYRKGGP+FGSTVSERV+ +S
Sbjct: 1707 ALTFNDLGIVPHKLKGYPVEFLISYRKGGPQFGSTVSERVNPDS 1750


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