BLASTX nr result
ID: Coptis21_contig00014905
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014905 (447 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|2... 203 1e-50 ref|XP_003610502.1| Integrator complex subunit-like protein [Med... 200 9e-50 ref|XP_004154690.1| PREDICTED: integrator complex subunit 3 homo... 187 8e-46 ref|XP_004139125.1| PREDICTED: uncharacterized protein LOC101216... 187 8e-46 ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homo... 177 8e-43 >ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|222845736|gb|EEE83283.1| predicted protein [Populus trichocarpa] Length = 995 Score = 203 bits (517), Expect = 1e-50 Identities = 99/151 (65%), Positives = 124/151 (82%), Gaps = 2/151 (1%) Frame = -1 Query: 447 VLLMRSIVVGEFSDGNLWLCVELVRIFLDYWDWVLEEW-LVLTSGLFTFLRVLSDHCKLS 271 V L+R IV G+FSDGNLWLC ELV +F WD ++E+ VLTS L+ +LRVL+DHCK+S Sbjct: 125 VCLLRQIVGGDFSDGNLWLCFELVSLFSSKWDCLVEDAPFVLTSALYVYLRVLADHCKVS 184 Query: 270 -GAKYEALKRMEIDFCVRVIRNHFSLCLRIGRDLVRILQDLVCVPEFKDIWKDLLLNPSV 94 AK E+LKR+EI+FCV+++R F+LC++IGRDL+R+L+DLV VPEF+ IW DL+ NPS Sbjct: 185 TDAKMESLKRLEIEFCVKMLREQFNLCMKIGRDLIRLLRDLVHVPEFRAIWNDLVSNPSE 244 Query: 93 FGVDGFSDISQLYCSRTSSRYLLLRITPEME 1 F +GFSDISQLYCSRTSSRY LLRITPEME Sbjct: 245 FRTEGFSDISQLYCSRTSSRYFLLRITPEME 275 >ref|XP_003610502.1| Integrator complex subunit-like protein [Medicago truncatula] gi|355511557|gb|AES92699.1| Integrator complex subunit-like protein [Medicago truncatula] Length = 560 Score = 200 bits (509), Expect = 9e-50 Identities = 94/150 (62%), Positives = 120/150 (80%), Gaps = 1/150 (0%) Frame = -1 Query: 447 VLLMRSIVVGEFSDGNLWLCVELVRIFLDYWDWVLEEWL-VLTSGLFTFLRVLSDHCKLS 271 + L+R IV G+FSD NLWLC +LV + LD WD +LEE VL SGL+ FLRVL+DHC+++ Sbjct: 125 ISLLRQIVGGDFSDDNLWLCEKLVTLLLDKWDCLLEEMPHVLCSGLYVFLRVLADHCRVN 184 Query: 270 GAKYEALKRMEIDFCVRVIRNHFSLCLRIGRDLVRILQDLVCVPEFKDIWKDLLLNPSVF 91 G K+E+LKR+E+ FCV+++R F LC++IGRD +R+LQDLV VPEFK IWKDL+LNPS F Sbjct: 185 GEKFESLKRLEVHFCVKIVREEFHLCMKIGRDFIRLLQDLVHVPEFKSIWKDLMLNPSSF 244 Query: 90 GVDGFSDISQLYCSRTSSRYLLLRITPEME 1 GFS +SQ+Y +RTSSRY LLRITP ME Sbjct: 245 NTLGFSGVSQIYLTRTSSRYALLRITPAME 274 >ref|XP_004154690.1| PREDICTED: integrator complex subunit 3 homolog [Cucumis sativus] Length = 588 Score = 187 bits (475), Expect = 8e-46 Identities = 89/150 (59%), Positives = 114/150 (76%), Gaps = 1/150 (0%) Frame = -1 Query: 447 VLLMRSIVVGEFSDGNLWLCVELVRIFLDYWDWVLEEWL-VLTSGLFTFLRVLSDHCKLS 271 + L+R IV G+F +GNLWLC EL + L+ W ++LEE V+ S L+TFLR+L+DHC+ S Sbjct: 125 ISLLRQIVGGDFGEGNLWLCFELASLLLNSWSYLLEELPEVMPSALYTFLRLLADHCRFS 184 Query: 270 GAKYEALKRMEIDFCVRVIRNHFSLCLRIGRDLVRILQDLVCVPEFKDIWKDLLLNPSVF 91 K LK++EI FC++VIR F CL+IGRD +R+LQDLV VPEF+D+WKDLL+NPS F Sbjct: 185 DEKLGPLKQLEIAFCIKVIREQFHFCLKIGRDFIRLLQDLVYVPEFRDVWKDLLINPSNF 244 Query: 90 GVDGFSDISQLYCSRTSSRYLLLRITPEME 1 GFSDIS Y +RTSSRY LLRI+PEME Sbjct: 245 RSPGFSDISNFYHTRTSSRYFLLRISPEME 274 >ref|XP_004139125.1| PREDICTED: uncharacterized protein LOC101216642 [Cucumis sativus] Length = 1058 Score = 187 bits (475), Expect = 8e-46 Identities = 89/150 (59%), Positives = 114/150 (76%), Gaps = 1/150 (0%) Frame = -1 Query: 447 VLLMRSIVVGEFSDGNLWLCVELVRIFLDYWDWVLEEWL-VLTSGLFTFLRVLSDHCKLS 271 + L+R IV G+F +GNLWLC EL + L+ W ++LEE V+ S L+TFLR+L+DHC+ S Sbjct: 125 ISLLRQIVGGDFGEGNLWLCFELTSLLLNSWSYLLEELPEVMPSALYTFLRLLADHCRFS 184 Query: 270 GAKYEALKRMEIDFCVRVIRNHFSLCLRIGRDLVRILQDLVCVPEFKDIWKDLLLNPSVF 91 K LK++EI FC++VIR F CL+IGRD +R+LQDLV VPEF+D+WKDLL+NPS F Sbjct: 185 DEKLGPLKQLEIAFCIKVIREQFHFCLKIGRDFIRLLQDLVYVPEFRDVWKDLLINPSNF 244 Query: 90 GVDGFSDISQLYCSRTSSRYLLLRITPEME 1 GFSDIS Y +RTSSRY LLRI+PEME Sbjct: 245 RSPGFSDISNFYHTRTSSRYFLLRISPEME 274 >ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homolog [Vitis vinifera] Length = 928 Score = 177 bits (449), Expect = 8e-43 Identities = 85/129 (65%), Positives = 106/129 (82%), Gaps = 2/129 (1%) Frame = -1 Query: 381 LVRIFLDYWDWVLEEW-LVLTSGLFTFLRVLSDHCKLSG-AKYEALKRMEIDFCVRVIRN 208 LV +FL W+W++EE LVL SGL+T+LRVL+DHC+ G +K EALKR+EI+FC+RV+R Sbjct: 132 LVSLFLSKWNWLVEEGPLVLRSGLYTYLRVLADHCRFPGDSKLEALKRIEIEFCIRVLRE 191 Query: 207 HFSLCLRIGRDLVRILQDLVCVPEFKDIWKDLLLNPSVFGVDGFSDISQLYCSRTSSRYL 28 F LCL+IGRDL+R+LQDLV VPEF+ +WKDL+LNP F + GF D+SQLY RTSSRY Sbjct: 192 QFHLCLKIGRDLIRLLQDLVHVPEFRAVWKDLVLNPGEFKIQGFEDVSQLYRERTSSRYF 251 Query: 27 LLRITPEME 1 LLRITPEME Sbjct: 252 LLRITPEME 260