BLASTX nr result

ID: Coptis21_contig00014905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014905
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|2...   203   1e-50
ref|XP_003610502.1| Integrator complex subunit-like protein [Med...   200   9e-50
ref|XP_004154690.1| PREDICTED: integrator complex subunit 3 homo...   187   8e-46
ref|XP_004139125.1| PREDICTED: uncharacterized protein LOC101216...   187   8e-46
ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homo...   177   8e-43

>ref|XP_002298478.1| predicted protein [Populus trichocarpa] gi|222845736|gb|EEE83283.1|
           predicted protein [Populus trichocarpa]
          Length = 995

 Score =  203 bits (517), Expect = 1e-50
 Identities = 99/151 (65%), Positives = 124/151 (82%), Gaps = 2/151 (1%)
 Frame = -1

Query: 447 VLLMRSIVVGEFSDGNLWLCVELVRIFLDYWDWVLEEW-LVLTSGLFTFLRVLSDHCKLS 271
           V L+R IV G+FSDGNLWLC ELV +F   WD ++E+   VLTS L+ +LRVL+DHCK+S
Sbjct: 125 VCLLRQIVGGDFSDGNLWLCFELVSLFSSKWDCLVEDAPFVLTSALYVYLRVLADHCKVS 184

Query: 270 -GAKYEALKRMEIDFCVRVIRNHFSLCLRIGRDLVRILQDLVCVPEFKDIWKDLLLNPSV 94
             AK E+LKR+EI+FCV+++R  F+LC++IGRDL+R+L+DLV VPEF+ IW DL+ NPS 
Sbjct: 185 TDAKMESLKRLEIEFCVKMLREQFNLCMKIGRDLIRLLRDLVHVPEFRAIWNDLVSNPSE 244

Query: 93  FGVDGFSDISQLYCSRTSSRYLLLRITPEME 1
           F  +GFSDISQLYCSRTSSRY LLRITPEME
Sbjct: 245 FRTEGFSDISQLYCSRTSSRYFLLRITPEME 275


>ref|XP_003610502.1| Integrator complex subunit-like protein [Medicago truncatula]
           gi|355511557|gb|AES92699.1| Integrator complex
           subunit-like protein [Medicago truncatula]
          Length = 560

 Score =  200 bits (509), Expect = 9e-50
 Identities = 94/150 (62%), Positives = 120/150 (80%), Gaps = 1/150 (0%)
 Frame = -1

Query: 447 VLLMRSIVVGEFSDGNLWLCVELVRIFLDYWDWVLEEWL-VLTSGLFTFLRVLSDHCKLS 271
           + L+R IV G+FSD NLWLC +LV + LD WD +LEE   VL SGL+ FLRVL+DHC+++
Sbjct: 125 ISLLRQIVGGDFSDDNLWLCEKLVTLLLDKWDCLLEEMPHVLCSGLYVFLRVLADHCRVN 184

Query: 270 GAKYEALKRMEIDFCVRVIRNHFSLCLRIGRDLVRILQDLVCVPEFKDIWKDLLLNPSVF 91
           G K+E+LKR+E+ FCV+++R  F LC++IGRD +R+LQDLV VPEFK IWKDL+LNPS F
Sbjct: 185 GEKFESLKRLEVHFCVKIVREEFHLCMKIGRDFIRLLQDLVHVPEFKSIWKDLMLNPSSF 244

Query: 90  GVDGFSDISQLYCSRTSSRYLLLRITPEME 1
              GFS +SQ+Y +RTSSRY LLRITP ME
Sbjct: 245 NTLGFSGVSQIYLTRTSSRYALLRITPAME 274


>ref|XP_004154690.1| PREDICTED: integrator complex subunit 3 homolog [Cucumis sativus]
          Length = 588

 Score =  187 bits (475), Expect = 8e-46
 Identities = 89/150 (59%), Positives = 114/150 (76%), Gaps = 1/150 (0%)
 Frame = -1

Query: 447 VLLMRSIVVGEFSDGNLWLCVELVRIFLDYWDWVLEEWL-VLTSGLFTFLRVLSDHCKLS 271
           + L+R IV G+F +GNLWLC EL  + L+ W ++LEE   V+ S L+TFLR+L+DHC+ S
Sbjct: 125 ISLLRQIVGGDFGEGNLWLCFELASLLLNSWSYLLEELPEVMPSALYTFLRLLADHCRFS 184

Query: 270 GAKYEALKRMEIDFCVRVIRNHFSLCLRIGRDLVRILQDLVCVPEFKDIWKDLLLNPSVF 91
             K   LK++EI FC++VIR  F  CL+IGRD +R+LQDLV VPEF+D+WKDLL+NPS F
Sbjct: 185 DEKLGPLKQLEIAFCIKVIREQFHFCLKIGRDFIRLLQDLVYVPEFRDVWKDLLINPSNF 244

Query: 90  GVDGFSDISQLYCSRTSSRYLLLRITPEME 1
              GFSDIS  Y +RTSSRY LLRI+PEME
Sbjct: 245 RSPGFSDISNFYHTRTSSRYFLLRISPEME 274


>ref|XP_004139125.1| PREDICTED: uncharacterized protein LOC101216642 [Cucumis sativus]
          Length = 1058

 Score =  187 bits (475), Expect = 8e-46
 Identities = 89/150 (59%), Positives = 114/150 (76%), Gaps = 1/150 (0%)
 Frame = -1

Query: 447 VLLMRSIVVGEFSDGNLWLCVELVRIFLDYWDWVLEEWL-VLTSGLFTFLRVLSDHCKLS 271
           + L+R IV G+F +GNLWLC EL  + L+ W ++LEE   V+ S L+TFLR+L+DHC+ S
Sbjct: 125 ISLLRQIVGGDFGEGNLWLCFELTSLLLNSWSYLLEELPEVMPSALYTFLRLLADHCRFS 184

Query: 270 GAKYEALKRMEIDFCVRVIRNHFSLCLRIGRDLVRILQDLVCVPEFKDIWKDLLLNPSVF 91
             K   LK++EI FC++VIR  F  CL+IGRD +R+LQDLV VPEF+D+WKDLL+NPS F
Sbjct: 185 DEKLGPLKQLEIAFCIKVIREQFHFCLKIGRDFIRLLQDLVYVPEFRDVWKDLLINPSNF 244

Query: 90  GVDGFSDISQLYCSRTSSRYLLLRITPEME 1
              GFSDIS  Y +RTSSRY LLRI+PEME
Sbjct: 245 RSPGFSDISNFYHTRTSSRYFLLRISPEME 274


>ref|XP_002275456.1| PREDICTED: integrator complex subunit 3 homolog [Vitis vinifera]
          Length = 928

 Score =  177 bits (449), Expect = 8e-43
 Identities = 85/129 (65%), Positives = 106/129 (82%), Gaps = 2/129 (1%)
 Frame = -1

Query: 381 LVRIFLDYWDWVLEEW-LVLTSGLFTFLRVLSDHCKLSG-AKYEALKRMEIDFCVRVIRN 208
           LV +FL  W+W++EE  LVL SGL+T+LRVL+DHC+  G +K EALKR+EI+FC+RV+R 
Sbjct: 132 LVSLFLSKWNWLVEEGPLVLRSGLYTYLRVLADHCRFPGDSKLEALKRIEIEFCIRVLRE 191

Query: 207 HFSLCLRIGRDLVRILQDLVCVPEFKDIWKDLLLNPSVFGVDGFSDISQLYCSRTSSRYL 28
            F LCL+IGRDL+R+LQDLV VPEF+ +WKDL+LNP  F + GF D+SQLY  RTSSRY 
Sbjct: 192 QFHLCLKIGRDLIRLLQDLVHVPEFRAVWKDLVLNPGEFKIQGFEDVSQLYRERTSSRYF 251

Query: 27  LLRITPEME 1
           LLRITPEME
Sbjct: 252 LLRITPEME 260


Top