BLASTX nr result

ID: Coptis21_contig00014878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014878
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40749.3| unnamed protein product [Vitis vinifera]              298   1e-78
ref|XP_004145556.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   293   4e-77
emb|CAN59776.1| hypothetical protein VITISV_024651 [Vitis vinifera]   290   3e-76
ref|XP_002273060.2| PREDICTED: probable FKBP-type peptidyl-proly...   286   7e-75
ref|XP_002510711.1| FK506 binding protein, putative [Ricinus com...   285   9e-75

>emb|CBI40749.3| unnamed protein product [Vitis vinifera]
          Length = 222

 Score =  298 bits (764), Expect = 1e-78
 Identities = 152/219 (69%), Positives = 179/219 (81%), Gaps = 3/219 (1%)
 Frame = +3

Query: 6   MASVQSFEKLVVD-IFLCSKPTPIQKQ--NQLVLPLPISRRAALFISVLPLNFISPCQPS 176
           MAS++S  +  VD + L    + IQ Q    ++LP+PISRR A+ ISVLP + IS    S
Sbjct: 1   MASIRSIHRWDVDNLLLTPTSSAIQTQPPKHVILPMPISRRCAILISVLPFSVISQPHSS 60

Query: 177 LARERRDRRVIPLEDYKTSSDGLKYYDLVEGKGRTAEKGSTVMVHFDCLYRNIDAVSSRE 356
            ARERR ++ IPLEDY TS DGLKYYD+V+G G  AEKGS+V VHFDC+YR+I AVSSRE
Sbjct: 61  DARERRTKKNIPLEDYLTSPDGLKYYDVVDGNGPVAEKGSSVQVHFDCIYRSITAVSSRE 120

Query: 357 SKLLAGNRSIAEPYEFKVGATPGKERKRDFVDNANGLFSAQASPKPPPAMYSVTEGMKVG 536
           SKLLAGNR IA+PY FKVGA PGKERKR+FVDN NGLFSAQA+PKPPPA+YS+TEGMKVG
Sbjct: 121 SKLLAGNRIIAQPYVFKVGAPPGKERKREFVDNPNGLFSAQAAPKPPPALYSITEGMKVG 180

Query: 537 GKRTVIVPPEAGYGKRGMNEIPPGATFQLTVELLEVLSP 653
           GKRTVIVPPEAGYG++GM+EIPPGATF+L VELL+VL P
Sbjct: 181 GKRTVIVPPEAGYGQKGMSEIPPGATFELNVELLQVLPP 219


>ref|XP_004145556.1| PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP18,
           chloroplastic-like [Cucumis sativus]
           gi|449530267|ref|XP_004172117.1| PREDICTED:
           peptidyl-prolyl cis-trans isomerase FKBP18,
           chloroplastic-like [Cucumis sativus]
          Length = 227

 Score =  293 bits (750), Expect = 4e-77
 Identities = 145/193 (75%), Positives = 163/193 (84%)
 Frame = +3

Query: 75  QKQNQLVLPLPISRRAALFISVLPLNFISPCQPSLARERRDRRVIPLEDYKTSSDGLKYY 254
           +  +Q    LPISRR+A+ IS LP   +S   PS ARERR+++ IPLEDY TS +GLKYY
Sbjct: 31  ENASQQEFSLPISRRSAILISSLPFTLVS-VSPSKARERRNKKTIPLEDYLTSPNGLKYY 89

Query: 255 DLVEGKGRTAEKGSTVMVHFDCLYRNIDAVSSRESKLLAGNRSIAEPYEFKVGATPGKER 434
           D+ EGKG  AEKGSTV VHFDCLYR I AVSSRESKLLAGNR IA+PYEFKVGA PGKER
Sbjct: 90  DVEEGKGPVAEKGSTVQVHFDCLYRGITAVSSRESKLLAGNRVIAQPYEFKVGAPPGKER 149

Query: 435 KRDFVDNANGLFSAQASPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYGKRGMNEIPPGAT 614
           KRDFVDN NGLFSAQA+PKPPPAMYS+TEGMKVGGKR VIVPPEAGYG++GMNEIPPGAT
Sbjct: 150 KRDFVDNPNGLFSAQAAPKPPPAMYSITEGMKVGGKRRVIVPPEAGYGQKGMNEIPPGAT 209

Query: 615 FQLTVELLEVLSP 653
           F+L +ELLEV+ P
Sbjct: 210 FELNIELLEVVQP 222


>emb|CAN59776.1| hypothetical protein VITISV_024651 [Vitis vinifera]
          Length = 682

 Score =  290 bits (743), Expect = 3e-76
 Identities = 147/216 (68%), Positives = 175/216 (81%), Gaps = 3/216 (1%)
 Frame = +3

Query: 6   MASVQSFEKLVVD-IFLCSKPTPIQKQ--NQLVLPLPISRRAALFISVLPLNFISPCQPS 176
           MAS++   +  VD + L    + IQ Q    ++LP+PI RR A+ ISVLP + IS    S
Sbjct: 1   MASIRXIHRWDVDNLLLTPTSSAIQTQPPKHVILPMPIXRRCAILISVLPFSLISQPHSS 60

Query: 177 LARERRDRRVIPLEDYKTSSDGLKYYDLVEGKGRTAEKGSTVMVHFDCLYRNIDAVSSRE 356
            ARERR ++ IPLEDY TS DGLKYYD+V+G G  AEKGS+V VHFDC+YR+I AVSSRE
Sbjct: 61  DARERRTKKNIPLEDYLTSPDGLKYYDVVBGNGPVAEKGSSVQVHFDCIYRSITAVSSRE 120

Query: 357 SKLLAGNRSIAEPYEFKVGATPGKERKRDFVDNANGLFSAQASPKPPPAMYSVTEGMKVG 536
           SK+LAGNR IA+PY FKVGA PGKERKR+FVDN NGLFSAQA+PKPPPA+YS+TEGMKVG
Sbjct: 121 SKJLAGNRIIAQPYVFKVGAPPGKERKREFVDNPNGLFSAQAAPKPPPALYSITEGMKVG 180

Query: 537 GKRTVIVPPEAGYGKRGMNEIPPGATFQLTVELLEV 644
           GKRTVIVPPEAGYG++GM+EIPPGATF+L VELL+V
Sbjct: 181 GKRTVIVPPEAGYGQKGMSEIPPGATFELNVELLQV 216


>ref|XP_002273060.2| PREDICTED: probable FKBP-type peptidyl-prolyl cis-trans isomerase
           1, chloroplastic [Vitis vinifera]
          Length = 187

 Score =  286 bits (731), Expect = 7e-75
 Identities = 140/184 (76%), Positives = 160/184 (86%)
 Frame = +3

Query: 102 LPISRRAALFISVLPLNFISPCQPSLARERRDRRVIPLEDYKTSSDGLKYYDLVEGKGRT 281
           +PISRR A+ ISVLP + IS    S ARERR ++ IPLEDY TS DGLKYYD+V+G G  
Sbjct: 1   MPISRRCAILISVLPFSVISQPHSSDARERRTKKNIPLEDYLTSPDGLKYYDVVDGNGPV 60

Query: 282 AEKGSTVMVHFDCLYRNIDAVSSRESKLLAGNRSIAEPYEFKVGATPGKERKRDFVDNAN 461
           AEKGS+V VHFDC+YR+I AVSSRESKLLAGNR IA+PY FKVGA PGKERKR+FVDN N
Sbjct: 61  AEKGSSVQVHFDCIYRSITAVSSRESKLLAGNRIIAQPYVFKVGAPPGKERKREFVDNPN 120

Query: 462 GLFSAQASPKPPPAMYSVTEGMKVGGKRTVIVPPEAGYGKRGMNEIPPGATFQLTVELLE 641
           GLFSAQA+PKPPPA+YS+TEGMKVGGKRTVIVPPEAGYG++GM+EIPPGATF+L VELL+
Sbjct: 121 GLFSAQAAPKPPPALYSITEGMKVGGKRTVIVPPEAGYGQKGMSEIPPGATFELNVELLQ 180

Query: 642 VLSP 653
           VL P
Sbjct: 181 VLPP 184


>ref|XP_002510711.1| FK506 binding protein, putative [Ricinus communis]
           gi|223551412|gb|EEF52898.1| FK506 binding protein,
           putative [Ricinus communis]
          Length = 219

 Score =  285 bits (730), Expect = 9e-75
 Identities = 146/219 (66%), Positives = 169/219 (77%)
 Frame = +3

Query: 6   MASVQSFEKLVVDIFLCSKPTPIQKQNQLVLPLPISRRAALFISVLPLNFISPCQPSLAR 185
           MA   S E+  ++          +   Q+V+  P SRR A+  S L L+ IS  Q +  R
Sbjct: 1   MALASSLERGAINHLRIISKQSQEPPKQVVVSTPTSRRCAVLTSSLSLSLISFPQLAEGR 60

Query: 186 ERRDRRVIPLEDYKTSSDGLKYYDLVEGKGRTAEKGSTVMVHFDCLYRNIDAVSSRESKL 365
           ERR+++ IPLEDY TS DGLKYYD+VEGKG  AEKGSTV VHFDC+YR I AVSSRESKL
Sbjct: 61  ERRNKKNIPLEDYLTSPDGLKYYDVVEGKGPIAEKGSTVQVHFDCMYRGITAVSSRESKL 120

Query: 366 LAGNRSIAEPYEFKVGATPGKERKRDFVDNANGLFSAQASPKPPPAMYSVTEGMKVGGKR 545
           LAGNR IA+PYEFKVGA PGKERKRDFVDN NGLFSAQA+PKPP AMY++T+GMK+GGKR
Sbjct: 121 LAGNRIIAQPYEFKVGAPPGKERKRDFVDNPNGLFSAQAAPKPPAAMYTITQGMKLGGKR 180

Query: 546 TVIVPPEAGYGKRGMNEIPPGATFQLTVELLEVLSP*TK 662
            VIVPPEAGYGK+GMNEIPPGATFQL +ELL+V SP  K
Sbjct: 181 IVIVPPEAGYGKKGMNEIPPGATFQLDIELLQVTSPEVK 219


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