BLASTX nr result

ID: Coptis21_contig00014868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014868
         (1719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282806.2| PREDICTED: uncharacterized protein LOC100257...   484   e-134
gb|AGC39092.1| remorin-1 protein [Dimocarpus longan]                  474   e-131
ref|XP_002510204.1| DNA binding protein, putative [Ricinus commu...   462   e-127
ref|XP_002326944.1| predicted protein [Populus trichocarpa] gi|2...   441   e-121
ref|XP_002302434.1| predicted protein [Populus trichocarpa] gi|2...   416   e-113

>ref|XP_002282806.2| PREDICTED: uncharacterized protein LOC100257562 [Vitis vinifera]
            gi|302142306|emb|CBI19509.3| unnamed protein product
            [Vitis vinifera]
          Length = 570

 Score =  484 bits (1245), Expect = e-134
 Identities = 253/418 (60%), Positives = 302/418 (72%), Gaps = 1/418 (0%)
 Frame = -1

Query: 1713 ATGSSPRFGGMKKSSVTSRKCGAFPSPGTPNYWQGSMGVQKGWSSERVPLPQNSGRRNVG 1534
            AT SSPR GGMKKSS +SR+ G FPSPGTPNY   + G+QKGWSSERVP   N  RR+V 
Sbjct: 160  ATSSSPRLGGMKKSSASSRRSGTFPSPGTPNYRHSNFGIQKGWSSERVPSHTNVNRRHVS 219

Query: 1533 TALLPFSSGRTLPSKWEDAEKWIFSPVSGDGLNRASVPLPQRRXXXXXXXXXXXGVAYYA 1354
             ALLPF++GRTLPSKWEDAE+WIFSPV+GDG+ + S P PQRR           G+AYY+
Sbjct: 220  AALLPFNNGRTLPSKWEDAERWIFSPVAGDGVVKPSFPPPQRRPKSKSGPLGPPGIAYYS 279

Query: 1353 TYSPCMPMFDGGNIGSYMEGSPFSAGALAANRLPGNGQHSVGCRD-GGSYPAHTEPGITR 1177
             YSP +PMF+GGN G++M GSPFSAG +A + L      ++ C   GG  P  TEP + R
Sbjct: 280  LYSPAIPMFEGGNAGNFMAGSPFSAGVIAPDGL------AIHCGGRGGVMPVRTEPCMGR 333

Query: 1176 SASVHGWSSERLRQSLPDSQDEKFDGIKDASTVISRAVSRRDMATQMSPDGSTHXXXXXX 997
            SASVHG S    + SL DS+DEKFDG+KDA+T ISR VSRRD+ATQMSP+GS        
Sbjct: 334  SASVHGCSELLNQSSLRDSRDEKFDGVKDAATDISRTVSRRDIATQMSPEGSIFSSPERK 393

Query: 996  XXXXXXXXXXXXPILEFNGCHSSKLEVRDVQVDDRVTMTRWSKKHGARGPERGFTNIGDW 817
                         I+E    +SSKLE+RDVQVD+RVTMTRWSKKH  R P +G  N+  W
Sbjct: 394  PSFSPSSPTVLP-IVELQSVNSSKLEIRDVQVDERVTMTRWSKKHRGRIPGKGSENVDGW 452

Query: 816  RKRSVETRASTWEPSEATKCMAKSNREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSS 637
            +K++VE  +S WE SE  K ++K  REEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSS
Sbjct: 453  KKKAVEAHSSAWEVSETAKSISKVKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSS 512

Query: 636  MDKIMNKLRLAQKKAQDMRSSVLVSQTNQVARTSNRIVFFRKHTQISSLSGCFTCHAF 463
            MDKIMNKLR AQ+KAQ+MRSSVL +  +QV+  +++ V F K  Q+SSLSGCFTCHAF
Sbjct: 513  MDKIMNKLRSAQRKAQEMRSSVLANHAHQVSGNAHKAVSFCKTRQMSSLSGCFTCHAF 570


>gb|AGC39092.1| remorin-1 protein [Dimocarpus longan]
          Length = 565

 Score =  474 bits (1220), Expect = e-131
 Identities = 254/418 (60%), Positives = 299/418 (71%), Gaps = 1/418 (0%)
 Frame = -1

Query: 1713 ATGSSPRFGGMKKSSVTSRKCGAFPSPGTPNYWQGSMGVQKGWSSERVPLPQNSGRRNVG 1534
            A+ SSPR G MKKSS  SRK   FPSPGTPNY Q ++G+QKGWSSERVPL     RR VG
Sbjct: 157  ASISSPRLGNMKKSSNLSRKSSTFPSPGTPNYRQANVGMQKGWSSERVPLQTAGNRRQVG 216

Query: 1533 TALLPFSSGRTLPSKWEDAEKWIFSPVSGDGLNRASVPLPQRRXXXXXXXXXXXGVAYYA 1354
             ALLP ++GRTLPSKWEDAE+WI SPV+GDG  R S   PQRR           GVAYY+
Sbjct: 217  AALLPLNNGRTLPSKWEDAERWILSPVAGDGGVRQSYVAPQRRPKSKSGPLGPPGVAYYS 276

Query: 1353 TYSPCMPMFDGGNIGSYMEGSPFSAGALAANRLPGN-GQHSVGCRDGGSYPAHTEPGITR 1177
             YSP +PMFDGGN+G++M GSPF+AG LA + L  N G H      GG++P   EP + R
Sbjct: 277  LYSPAVPMFDGGNVGNFMVGSPFTAGVLAPDGLGINSGDH------GGAFPLRMEPCMAR 330

Query: 1176 SASVHGWSSERLRQSLPDSQDEKFDGIKDASTVISRAVSRRDMATQMSPDGSTHXXXXXX 997
            SASVHG S    + SLP S DEK DG +DA+T ISR +SRRDMATQMSP+GSTH      
Sbjct: 331  SASVHGCSEVLNQPSLP-SHDEKIDGSRDAATDISRTISRRDMATQMSPEGSTHSSPERR 389

Query: 996  XXXXXXXXXXXXPILEFNGCHSSKLEVRDVQVDDRVTMTRWSKKHGARGPERGFTNIGDW 817
                         I+E  G  SSK EVRDVQVDDRVTMTRWSKKH +R   +    + DW
Sbjct: 390  PFSVSTPSALP--IVELQGVQSSKSEVRDVQVDDRVTMTRWSKKHRSRISGKSSEIVDDW 447

Query: 816  RKRSVETRASTWEPSEATKCMAKSNREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSS 637
            RK++++TR S+W+ +++TK ++K  REE +ITAWENLQKAKAEAAIRKLEMKLEKKRSSS
Sbjct: 448  RKKALDTRTSSWDITDSTKTISKVKREELRITAWENLQKAKAEAAIRKLEMKLEKKRSSS 507

Query: 636  MDKIMNKLRLAQKKAQDMRSSVLVSQTNQVARTSNRIVFFRKHTQISSLSGCFTCHAF 463
            MDKIMNKLR AQK+AQ+MRSSVL +Q NQVART  + V  R+  Q+ SLSGCFTCHAF
Sbjct: 508  MDKIMNKLRSAQKRAQEMRSSVLANQDNQVARTQYKAVSIRRTRQMGSLSGCFTCHAF 565


>ref|XP_002510204.1| DNA binding protein, putative [Ricinus communis]
            gi|223550905|gb|EEF52391.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 601

 Score =  462 bits (1188), Expect = e-127
 Identities = 252/424 (59%), Positives = 304/424 (71%), Gaps = 6/424 (1%)
 Frame = -1

Query: 1716 IATGSSPRFGGMKKSSVTSRKCGAFPSPGTPNYWQGSMGVQKGWSSERVPLPQNSGRR-- 1543
            +   SSPR  GMKKS+ +SRK G FPSPGTPNY   S+G+QKGWSSERVPL   S  R  
Sbjct: 187  VIAASSPRLSGMKKSTTSSRKSGTFPSPGTPNYRHASVGMQKGWSSERVPLHNLSNNRRQ 246

Query: 1542 --NVGTALLPFSSGRTLPSKWEDAEKWIFSPVSGDGLNRASV-PLPQRRXXXXXXXXXXX 1372
              N   +LL   +GRTLPSKWEDAE+WIFSPVSGDG  R S+  +PQRR           
Sbjct: 247  QANANASLL-LPNGRTLPSKWEDAERWIFSPVSGDGGMRTSINQVPQRRPKSKSGPLGPP 305

Query: 1371 GVAYYATYSPCMPMFDGGNIGSYMEGS-PFSAGALAANRLPGNGQHSVGCRDGGSYPAHT 1195
            G+AYY+ YSP MP+FDGGN+G++M  S PFSAG +AA+   G G  S G  +G ++P  T
Sbjct: 306  GIAYYSLYSPAMPVFDGGNMGNFMSASSPFSAGVIAAD---GLGMRSNG--NGVAFPVRT 360

Query: 1194 EPGITRSASVHGWSSERLRQSLPDSQDEKFDGIKDASTVISRAVSRRDMATQMSPDGSTH 1015
            EP + RS SVHG  SE L QS   SQDEK DG+KDA+T +S +VSRRDMATQMSP+GS H
Sbjct: 361  EPCMARSVSVHG-CSEVLPQSSSASQDEKLDGVKDAATDLS-SVSRRDMATQMSPEGSNH 418

Query: 1014 XXXXXXXXXXXXXXXXXXPILEFNGCHSSKLEVRDVQVDDRVTMTRWSKKHGARGPERGF 835
                               I+E    H+SK +VRDVQVD+RVT+TRWSKKH +R   +  
Sbjct: 419  SSPSMRTSFSASTPSILP-IVEVQSVHTSKSQVRDVQVDERVTVTRWSKKHRSRNQGKNS 477

Query: 834  TNIGDWRKRSVETRASTWEPSEATKCMAKSNREEAKITAWENLQKAKAEAAIRKLEMKLE 655
              + DWRK+SV+ R+S W+ SEA KC++K+ REEAKITAWENLQKAKAEAAIRKLEMKLE
Sbjct: 478  EIVDDWRKKSVDARSSPWDVSEAAKCISKAKREEAKITAWENLQKAKAEAAIRKLEMKLE 537

Query: 654  KKRSSSMDKIMNKLRLAQKKAQDMRSSVLVSQTNQVARTSNRIVFFRKHTQISSLSGCFT 475
            +KRSSSMDKIMNKLR AQK+AQ+MRSSVL +Q NQV+RTS++ + FR+  Q+ SLSGCFT
Sbjct: 538  RKRSSSMDKIMNKLRSAQKRAQEMRSSVLTNQANQVSRTSHKAISFRRTRQMGSLSGCFT 597

Query: 474  CHAF 463
            CHAF
Sbjct: 598  CHAF 601


>ref|XP_002326944.1| predicted protein [Populus trichocarpa] gi|222835259|gb|EEE73694.1|
            predicted protein [Populus trichocarpa]
          Length = 409

 Score =  441 bits (1135), Expect = e-121
 Identities = 244/417 (58%), Positives = 294/417 (70%), Gaps = 11/417 (2%)
 Frame = -1

Query: 1683 MKKS-SVTSRKCGAFPSPGTPNY---WQGSMGVQKGWSSERVPLPQNSGRRNV----GTA 1528
            MKKS + +SRK G FPSPGTPNY   +  S+G+QKGWSSERVPLP NS RR V    G A
Sbjct: 1    MKKSIACSSRKSGTFPSPGTPNYLNQYHSSVGMQKGWSSERVPLPNNSNRRQVMNTTGAA 60

Query: 1527 LLPFSS-GRTLPSKWEDAEKWIFSPVSGDGLNRASVPLPQRRXXXXXXXXXXXGVAYYAT 1351
            +LP+++ GRTLPSKWEDAE+WIFSPVSGDG+ R+S+   QRR           GVAYY+ 
Sbjct: 61   VLPYNNNGRTLPSKWEDAERWIFSPVSGDGVVRSSIQPAQRRPKSKSGPLGPPGVAYYSL 120

Query: 1350 YSPCMPMFDGGNIGSYMEGSPFSAGALAANRLP--GNGQHSVGCRDGGSYPAHTEPGITR 1177
            YSP M +FDGGN G+++ GSPFSAG +AA+ L    +G H V      S+P  TEP + R
Sbjct: 121  YSPGMQVFDGGNAGNFVAGSPFSAGVIAADGLGIRSHGSHGV------SFPMRTEPCMAR 174

Query: 1176 SASVHGWSSERLRQSLPDSQDEKFDGIKDASTVISRAVSRRDMATQMSPDGSTHXXXXXX 997
            S SVHG S    + SLP SQDEK DG+KDA+T ISR VSRRDMATQMSP GS H      
Sbjct: 175  SVSVHGCSEMVAQSSLP-SQDEKLDGVKDAATDISRVVSRRDMATQMSPVGSNHSSPTRK 233

Query: 996  XXXXXXXXXXXXPILEFNGCHSSKLEVRDVQVDDRVTMTRWSKKHGARGPERGFTNIGDW 817
                         I+E     SS+ E RDVQVD+RVT+TRWSKKH AR   +    + DW
Sbjct: 234  PSFSTSTPSVLP-IVELQSVPSSRSETRDVQVDERVTVTRWSKKHRARNHGKSSQVVDDW 292

Query: 816  RKRSVETRASTWEPSEATKCMAKSNREEAKITAWENLQKAKAEAAIRKLEMKLEKKRSSS 637
            RK++ +T +S W+ SEA K ++K  REEAKITAWENLQKAKAEA IRKLEMKLEKKRSSS
Sbjct: 293  RKKAADTLSSGWDVSEAGKSISKVKREEAKITAWENLQKAKAEAEIRKLEMKLEKKRSSS 352

Query: 636  MDKIMNKLRLAQKKAQDMRSSVLVSQTNQVARTSNRIVFFRKHTQISSLSGCFTCHA 466
            MD+IMNKLR AQK+AQ+MRSSVL +Q +QV+  S++++ FR+  Q  SLSGCFTCHA
Sbjct: 353  MDRIMNKLRSAQKRAQEMRSSVLANQAHQVSTNSHKVISFRRTRQKGSLSGCFTCHA 409


>ref|XP_002302434.1| predicted protein [Populus trichocarpa] gi|222844160|gb|EEE81707.1|
            predicted protein [Populus trichocarpa]
          Length = 578

 Score =  416 bits (1069), Expect = e-113
 Identities = 244/440 (55%), Positives = 286/440 (65%), Gaps = 22/440 (5%)
 Frame = -1

Query: 1716 IATGSSPRFGGMKKSSV-TSRKCGAFPSPGTPNYWQGSMGVQKGWSSERVPLPQNSGRRN 1540
            + T  SPR G MKKS V +SRK G FPSPGTPNY   S G+QKGWSSERVPLP NS RR 
Sbjct: 163  VVTSPSPRLGNMKKSIVYSSRKSGTFPSPGTPNY-HSSAGMQKGWSSERVPLPNNSNRRQ 221

Query: 1539 V----GTALLPFSS-------GRTLPSKWEDAEKWIFSPVSGDGLNRASVPLPQRRXXXX 1393
            V      A+ PF++       GR LPSKWEDAE+WIFSPVSGDG  R+S+   QRR    
Sbjct: 222  VMNATAAAVSPFNNNTNNNNNGRPLPSKWEDAERWIFSPVSGDGFVRSSIQPAQRRPKSK 281

Query: 1392 XXXXXXXGVAYYATYSPCMPMFDGGNIGSYMEGSPFSAGALAANRL--PGNGQHSVGCRD 1219
                   GVAYY+ YSP + +FDG N+G+++ GSPFSA  +AA+ L    NG H V    
Sbjct: 282  SGPLGPPGVAYYSLYSPAIQVFDGRNMGNFIAGSPFSASVIAADGLAVKSNGSHGV---- 337

Query: 1218 GGSYPAHTEPGITRSASVHGWSSERLRQSLPDSQDEKFDGIKDASTVISRAVSRRDMATQ 1039
              ++P  TEP + RS SVHG  SE L QS   SQDEK DG+KDA+T ISRAVSRRDMATQ
Sbjct: 338  --AFPMRTEPCMARSVSVHG-CSEMLAQSSLPSQDEKLDGVKDAATDISRAVSRRDMATQ 394

Query: 1038 MSPDGSTHXXXXXXXXXXXXXXXXXXPILEFNGCHSSKLEVRDVQVDDRVTMTRWSKKHG 859
            MSP+GS H                   I+E  G +SSK EVRDVQVD+RVT+TRWSKKH 
Sbjct: 395  MSPEGSNH-SSPTRQPSFSVSTPSSLAIVELQGFNSSKSEVRDVQVDERVTVTRWSKKHR 453

Query: 858  ARGPERGFTNIGDWRKRSVETRASTWEPSEATKCMAKSNREEAKITAWENLQKAKAEAAI 679
            AR   +    + DWR+             EA   + K  REEAKITAWENLQKAKAEA +
Sbjct: 454  ARNHGKSSEIVDDWRE-------------EAADALVK--REEAKITAWENLQKAKAEAEL 498

Query: 678  RKLE--------MKLEKKRSSSMDKIMNKLRLAQKKAQDMRSSVLVSQTNQVARTSNRIV 523
            RKLE        MKLEKKRSSSMD+IMNKLR AQK+AQ+MRSSVL +Q +QV+  S + +
Sbjct: 499  RKLEVLFFPTCFMKLEKKRSSSMDRIMNKLRSAQKRAQEMRSSVLANQAHQVSTNSRKAI 558

Query: 522  FFRKHTQISSLSGCFTCHAF 463
             FR+  Q  SLSGCFTCHAF
Sbjct: 559  SFRRTCQKGSLSGCFTCHAF 578


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