BLASTX nr result

ID: Coptis21_contig00014842 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014842
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529315.1| DNA binding protein, putative [Ricinus commu...   261   2e-67
gb|ABZ89182.1| putative protein [Coffea canephora] gi|326367382|...   256   1e-65
gb|ADY38789.1| DNA-binding protein [Coffea arabica]                   254   4e-65
emb|CBI35166.3| unnamed protein product [Vitis vinifera]              253   5e-65
ref|XP_002271606.1| PREDICTED: putative DNA-binding protein ESCA...   253   9e-65

>ref|XP_002529315.1| DNA binding protein, putative [Ricinus communis]
            gi|223531239|gb|EEF33084.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 301

 Score =  261 bits (668), Expect = 2e-67
 Identities = 157/290 (54%), Positives = 174/290 (60%), Gaps = 1/290 (0%)
 Frame = -3

Query: 1085 MANPWWTGQVGLPGVEPGTAGSPAFRKRERGELSSMNXXXXXXXXXXXXXXXXXXXEPKE 906
            +ANPWWTGQ+GL G++P +  SP+  K  R     ++                   EPKE
Sbjct: 19   LANPWWTGQIGLAGLDPAS-NSPSLNKANR----EISINDNSNSRGEDDDDRDTGDEPKE 73

Query: 905  GAVEIXXXXXXXXXXXXXXXXXXPIFVTRDSPNALRSHVMEIVSGTDVAESVAQFARRRQ 726
            GAVE+                  PIFVTRDSPNALRSHVME+V G DVAE VAQFARRRQ
Sbjct: 74   GAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVVGGADVAECVAQFARRRQ 133

Query: 725  RGVCVLSGSGVVANVTLRQPSAPSAVVALQGRFEILSLTGSFLPGPAPPGSTGLTVYLAX 546
            RGVCVLSGSG VANVTLRQP+AP AVVAL GRFEILSLTG+FLPGPAPPGSTGLTVYLA 
Sbjct: 134  RGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAG 193

Query: 545  XXXXXXXXXXXGTLIAAGPVIVIAATFANATYERLPIXXXXXXXXXXXXXXXXXXXXXXX 366
                       G+LIAAGPV+VIAATFANATYERLP+                       
Sbjct: 194  GQGQVVGGSVVGSLIAAGPVMVIAATFANATYERLPL--EDDEEAASAGQGHIQGGSNNS 251

Query: 365  XXXXXXXXXXXXXXXXXXXPVYNNLPPNLIPN-GQLSQEAYGWAHGRTPF 219
                               PVY NLPPNLIPN GQL  +AY WAHGR P+
Sbjct: 252  PPPIGSTGQQPGLPDPSALPVY-NLPPNLIPNGGQLGHDAYAWAHGRPPY 300


>gb|ABZ89182.1| putative protein [Coffea canephora] gi|326367382|gb|ADZ55300.1|
            DNA-binding protein [Coffea arabica]
          Length = 289

 Score =  256 bits (653), Expect = 1e-65
 Identities = 151/293 (51%), Positives = 176/293 (60%), Gaps = 4/293 (1%)
 Frame = -3

Query: 1085 MANPWWTGQVGLPGVEPGTA-GSPAFRKRERGELSSMNXXXXXXXXXXXXXXXXXXXE-- 915
            MAN WWTGQVGLPGVE  ++ GSP  +K + G   + N                      
Sbjct: 1    MANRWWTGQVGLPGVETSSSTGSPVLKKPDLGISMNDNSGSGGGSGGRDDEDERENSTDE 60

Query: 914  PKEGAVEIXXXXXXXXXXXXXXXXXXPIFVTRDSPNALRSHVMEIVSGTDVAESVAQFAR 735
            PKEGAVE+                  PIFVTRDSPNALRSHVME+ +G+D+AES+AQFAR
Sbjct: 61   PKEGAVEVATRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVANGSDIAESIAQFAR 120

Query: 734  RRQRGVCVLSGSGVVANVTLRQPSAPSAVVALQGRFEILSLTGSFLPGPAPPGSTGLTVY 555
            RRQRGVCVLS SG V NVTLRQPSAP AV+AL GRFEILSLTG+FLPGPAPPG+TGLT+Y
Sbjct: 121  RRQRGVCVLSASGTVTNVTLRQPSAPGAVMALHGRFEILSLTGAFLPGPAPPGATGLTIY 180

Query: 554  LAXXXXXXXXXXXXGTLIAAGPVIVIAATFANATYERLPIXXXXXXXXXXXXXXXXXXXX 375
            LA            G+L+A+GPV+VIA+TF+NATYERLPI                    
Sbjct: 181  LAGGQGQVVGGSVVGSLVASGPVMVIASTFSNATYERLPI---EEDEEGGGAAQGQLGGN 237

Query: 374  XXXXXXXXXXXXXXXXXXXXXXPVYNNLPPNLIPN-GQLSQEAYGWAHGRTPF 219
                                  PVY NLPPNL+PN GQL+ EA+ WAHGR P+
Sbjct: 238  GSPPLGSGGAPQQGGLGDPSSMPVY-NLPPNLMPNGGQLNHEAFAWAHGRPPY 289


>gb|ADY38789.1| DNA-binding protein [Coffea arabica]
          Length = 289

 Score =  254 bits (648), Expect = 4e-65
 Identities = 150/293 (51%), Positives = 176/293 (60%), Gaps = 4/293 (1%)
 Frame = -3

Query: 1085 MANPWWTGQVGLPGVEPGTA-GSPAFRKRERGELSSMNXXXXXXXXXXXXXXXXXXXE-- 915
            MAN WWTGQVGLPGVE  ++ GSP  +K + G   + N                      
Sbjct: 1    MANRWWTGQVGLPGVETSSSTGSPVLKKPDLGISMNDNSGSGGGSGGRDDEDERENSTDE 60

Query: 914  PKEGAVEIXXXXXXXXXXXXXXXXXXPIFVTRDSPNALRSHVMEIVSGTDVAESVAQFAR 735
            PKEGAVE+                  PIFVTRDSPNALRSHVME+ +G+D+AES+AQFAR
Sbjct: 61   PKEGAVEVATRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVANGSDIAESIAQFAR 120

Query: 734  RRQRGVCVLSGSGVVANVTLRQPSAPSAVVALQGRFEILSLTGSFLPGPAPPGSTGLTVY 555
            RRQRGVCVLS SG V NVTLRQPSAP AV+AL GRFEILSLTG+FLPGPAPPG+TGLT+Y
Sbjct: 121  RRQRGVCVLSASGTVTNVTLRQPSAPGAVMALHGRFEILSLTGAFLPGPAPPGATGLTIY 180

Query: 554  LAXXXXXXXXXXXXGTLIAAGPVIVIAATFANATYERLPIXXXXXXXXXXXXXXXXXXXX 375
            LA            G+L+A+GPV+VIA+TF+NATYERLPI                    
Sbjct: 181  LAGGQGQVVGGSVVGSLVASGPVMVIASTFSNATYERLPI---EEDEEGGGAAQGQLGGN 237

Query: 374  XXXXXXXXXXXXXXXXXXXXXXPVYNNLPPNLIPN-GQLSQEAYGWAHGRTPF 219
                                  PVY +LPPNL+PN GQL+ EA+ WAHGR P+
Sbjct: 238  GSPPLGSGGAPQQGGLGDPSSMPVY-SLPPNLMPNGGQLNHEAFAWAHGRPPY 289


>emb|CBI35166.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score =  253 bits (647), Expect = 5e-65
 Identities = 151/291 (51%), Positives = 175/291 (60%), Gaps = 2/291 (0%)
 Frame = -3

Query: 1085 MANPWWTGQVGLPGVEPGTAGSPAFRKRERGELSSMNXXXXXXXXXXXXXXXXXXXEPKE 906
            MAN WW GQVGL GV+  +A SPA +K + G   + N                   EP+E
Sbjct: 1    MANRWWAGQVGLQGVDTSSA-SPAMKKPDLGISMNENGGSGSGGGGEEEEEKENSDEPRE 59

Query: 905  GAVEIXXXXXXXXXXXXXXXXXXPIFVTRDSPNALRSHVMEIVSGTDVAESVAQFARRRQ 726
            GA+E+                  PIFVTRDSPNALRSHVME+ +G+D+ ES+AQFARRRQ
Sbjct: 60   GAIEVATRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVANGSDITESIAQFARRRQ 119

Query: 725  RGVCVLSGSGVVANVTLRQPSAP-SAVVALQGRFEILSLTGSFLPGPAPPGSTGLTVYLA 549
            RGVCVLS SG V NVTLRQPSAP  AV+AL GRFEILSLTG+FLPGPAPPGSTGLT+YLA
Sbjct: 120  RGVCVLSASGTVMNVTLRQPSAPGGAVMALHGRFEILSLTGAFLPGPAPPGSTGLTIYLA 179

Query: 548  XXXXXXXXXXXXGTLIAAGPVIVIAATFANATYERLPIXXXXXXXXXXXXXXXXXXXXXX 369
                        G+LIAAGPV+VIAATF+NATYERLP+                      
Sbjct: 180  GGQAQVVGGSVVGSLIAAGPVMVIAATFSNATYERLPL--------------EDEEEAGS 225

Query: 368  XXXXXXXXXXXXXXXXXXXXPVYNNLPPNLIPN-GQLSQEAYGWAHGRTPF 219
                                PVY NLPPNL+PN GQL+ +AYGWAHGR P+
Sbjct: 226  AAQEQLAGGGGGGMADPSSMPVY-NLPPNLLPNGGQLNHDAYGWAHGRQPY 275


>ref|XP_002271606.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 291

 Score =  253 bits (645), Expect = 9e-65
 Identities = 148/292 (50%), Positives = 173/292 (59%), Gaps = 3/292 (1%)
 Frame = -3

Query: 1085 MANPWWTGQVGLPGVEPGTAGSPAFRKRERGELSSMNXXXXXXXXXXXXXXXXXXXEPKE 906
            MAN WW GQVGL GV+  +A SPA +K + G   + N                   EP+E
Sbjct: 1    MANRWWAGQVGLQGVDTSSA-SPAMKKPDLGISMNENGGSGSGGGGEEEEEKENSDEPRE 59

Query: 905  GAVEIXXXXXXXXXXXXXXXXXXPIFVTRDSPNALRSHVMEIVSGTDVAESVAQFARRRQ 726
            GA+E+                  PIFVTRDSPNALRSHVME+ +G+D+ ES+AQFARRRQ
Sbjct: 60   GAIEVATRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVANGSDITESIAQFARRRQ 119

Query: 725  RGVCVLSGSGVVANVTLRQPSAP-SAVVALQGRFEILSLTGSFLPGPAPPGSTGLTVYLA 549
            RGVCVLS SG V NVTLRQPSAP  AV+AL GRFEILSLTG+FLPGPAPPGSTGLT+YLA
Sbjct: 120  RGVCVLSASGTVMNVTLRQPSAPGGAVMALHGRFEILSLTGAFLPGPAPPGSTGLTIYLA 179

Query: 548  XXXXXXXXXXXXGTLIAAGPVIVIAATFANATYERLPIXXXXXXXXXXXXXXXXXXXXXX 369
                        G+LIAAGPV+VIAATF+NATYERLP+                      
Sbjct: 180  GGQAQVVGGSVVGSLIAAGPVMVIAATFSNATYERLPLEDEEEAGSAAQEQLAGGGGGGG 239

Query: 368  XXXXXXXXXXXXXXXXXXXXPV-YNNLPPNLIPN-GQLSQEAYGWAHGRTPF 219
                                 +   NLPPNL+PN GQL+ +AYGWAHGR P+
Sbjct: 240  SPPGIGGSGGQQQAGMADPSSMPVYNLPPNLLPNGGQLNHDAYGWAHGRQPY 291


Top