BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014837
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding prote...    79   4e-13
ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002532469.1| double-stranded RNA binding protein, putativ...    72   6e-11
ref|XP_002445448.1| hypothetical protein SORBIDRAFT_07g019380 [S...    63   3e-08
emb|CAC05659.1| RBP2 protein [Brassica oleracea var. capitata]         58   9e-07

>ref|XP_002272597.2| PREDICTED: double-stranded RNA-binding protein 4-like [Vitis
           vinifera] gi|296087161|emb|CBI33535.3| unnamed protein
           product [Vitis vinifera]
          Length = 333

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/71 (53%), Positives = 50/71 (70%), Gaps = 2/71 (2%)
 Frame = +3

Query: 3   IPDECMHKNRLQQYAQKSKLPLPTYTT--ESFGTVLQFRSSVSVDGVNYMSAETFLHKKE 176
           +P+  MHKNRLQ+Y Q+S +PLP Y T  E F    +FRS+V VDG  Y S  TF H+K 
Sbjct: 17  LPEHLMHKNRLQEYTQRSAIPLPIYQTVNEGFQHAPKFRSTVLVDGATYTSPNTFSHRKA 76

Query: 177 AEQNVAKIAME 209
           AEQ+VA++A+E
Sbjct: 77  AEQDVARLALE 87


>ref|XP_002302963.1| predicted protein [Populus trichocarpa] gi|222844689|gb|EEE82236.1|
           predicted protein [Populus trichocarpa]
          Length = 452

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 40/72 (55%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
 Frame = +3

Query: 3   IPDECMHKNRLQQYAQKSKLPLPTYTTESFGT--VLQFRSSVSVDGVNYMSAETFLHKKE 176
           +PD  M+KNRLQ+Y QKS L LP Y T + G   + +FRS+V VDG  Y S +TFLH+K 
Sbjct: 134 LPDNLMYKNRLQEYTQKSSLQLPVYQTLNEGPAHMPRFRSTVWVDGARYRSQKTFLHRKA 193

Query: 177 AEQNVAKIAMES 212
           AEQ+VA +A+ES
Sbjct: 194 AEQDVANLALES 205


>ref|XP_002532469.1| double-stranded RNA binding protein, putative [Ricinus communis]
           gi|223527827|gb|EEF29925.1| double-stranded RNA binding
           protein, putative [Ricinus communis]
          Length = 289

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 37/71 (52%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
 Frame = +3

Query: 6   PDECMHKNRLQQYAQKSKLPLPTYTT--ESFGTVLQFRSSVSVDGVNYMSAETFLHKKEA 179
           P+  M+KNRLQ+Y Q+  L LP Y T  E +    +FRS+V VDG  Y S  TF H+KEA
Sbjct: 9   PEHLMYKNRLQEYTQRQSLQLPIYQTVNEGYPHDPKFRSTVLVDGEEYTSHNTFSHRKEA 68

Query: 180 EQNVAKIAMES 212
           EQ+VAK+A+ S
Sbjct: 69  EQDVAKLALTS 79


>ref|XP_002445448.1| hypothetical protein SORBIDRAFT_07g019380 [Sorghum bicolor]
           gi|241941798|gb|EES14943.1| hypothetical protein
           SORBIDRAFT_07g019380 [Sorghum bicolor]
          Length = 298

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/71 (49%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
 Frame = +3

Query: 3   IPDECMHKNRLQQYAQKSKLPLPTYTTESFGTVLQ--FRSSVSVDGVNYMSAETFLHKKE 176
           IPD+ MHKNRLQ +A+++    P Y  ES G   Q  FR +V V G  + SA +F  KKE
Sbjct: 42  IPDKYMHKNRLQSFAERTYKKPPVYKVESEGASHQPKFRCTVEVGGQQFSSAGSFDRKKE 101

Query: 177 AEQNVAKIAME 209
           AEQ+ A+IA E
Sbjct: 102 AEQDAARIAYE 112


>emb|CAC05659.1| RBP2 protein [Brassica oleracea var. capitata]
          Length = 283

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 31/64 (48%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
 Frame = +3

Query: 24  KNRLQQYAQKSKLPLPTYTTESFGTVLQ--FRSSVSVDGVNYMSAETFLHKKEAEQNVAK 197
           K+RLQ+YAQK KLP P Y T   G   +  F+S+V VDGV Y S   F ++K AEQ+ A+
Sbjct: 17  KSRLQEYAQKYKLPTPIYETVKEGPSHKSLFQSTVIVDGVRYDSLPGFFNRKAAEQSAAE 76

Query: 198 IAME 209
           +A++
Sbjct: 77  VALQ 80