BLASTX nr result
ID: Coptis21_contig00014835
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014835 (784 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycin... 251 2e-64 emb|CBI20486.3| unnamed protein product [Vitis vinifera] 246 3e-63 ref|NP_001235551.1| uncharacterized protein LOC100500009 [Glycin... 246 4e-63 ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloro... 244 2e-62 ref|XP_003596594.1| 50S ribosomal protein L24 [Medicago truncatu... 243 4e-62 >ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycine max] gi|255629161|gb|ACU14925.1| unknown [Glycine max] Length = 194 Score = 251 bits (640), Expect = 2e-64 Identities = 120/172 (69%), Positives = 144/172 (83%), Gaps = 1/172 (0%) Frame = +1 Query: 13 MATMEAXXXXXXXXXXXXXXFFGQRLSP-SIYSSLPVKSVEKPCLIVMRLKRWERKECKP 189 MA M A F GQRLSP ++ S LP KS EK C IVMRLKRWERKECKP Sbjct: 1 MAAMAALQSSMVGLSLSSNSFLGQRLSPITLPSLLPGKSTEKQCPIVMRLKRWERKECKP 60 Query: 190 NSLPMLQKMHVRIGDTVKIISGHEKGKIGEVTRLFKHNSTIIIKDINLKTKHMKSREQGE 369 NSLP+L KMHV++GDTV++ISG E+GK+GE+T++FKHNST+I+KD+NLKTKH+KSRE+GE Sbjct: 61 NSLPILHKMHVKLGDTVQVISGRERGKVGEITKIFKHNSTVIVKDLNLKTKHVKSREEGE 120 Query: 370 PGQIVKVEGPVHSSNVMLYSKDQNVASRVGHKILEDGTRVRYLIKTGEIIDS 525 PGQI+K+EGP+HSSNVMLYSKDQ VASRVGHK+L++G +VRYLIKTGEIIDS Sbjct: 121 PGQIIKIEGPIHSSNVMLYSKDQKVASRVGHKVLDNGKKVRYLIKTGEIIDS 172 >emb|CBI20486.3| unnamed protein product [Vitis vinifera] Length = 236 Score = 246 bits (629), Expect = 3e-63 Identities = 119/173 (68%), Positives = 140/173 (80%) Frame = +1 Query: 7 TRMATMEAXXXXXXXXXXXXXXFFGQRLSPSIYSSLPVKSVEKPCLIVMRLKRWERKECK 186 T+MA M A F GQ SP +Y SL KS EKPC IVMRLKRWERKECK Sbjct: 44 TKMAAMAALQSSFTSLSLSSNSFLGQPFSPLLYPSL-AKSTEKPCPIVMRLKRWERKECK 102 Query: 187 PNSLPMLQKMHVRIGDTVKIISGHEKGKIGEVTRLFKHNSTIIIKDINLKTKHMKSREQG 366 PNSLP+L KMHV++GDTVKIISG EKG+ GE++++F+HNST+++KDINLKTKH+K R + Sbjct: 103 PNSLPVLHKMHVKVGDTVKIISGREKGRTGEISKIFRHNSTVVVKDINLKTKHVKGRGED 162 Query: 367 EPGQIVKVEGPVHSSNVMLYSKDQNVASRVGHKILEDGTRVRYLIKTGEIIDS 525 EPGQI+K+E P+HSSNVMLYSK+QNVASRVGHKILE+G RVRYLIKTGEIIDS Sbjct: 163 EPGQIIKIEAPIHSSNVMLYSKEQNVASRVGHKILENGKRVRYLIKTGEIIDS 215 >ref|NP_001235551.1| uncharacterized protein LOC100500009 [Glycine max] gi|255628481|gb|ACU14585.1| unknown [Glycine max] Length = 193 Score = 246 bits (628), Expect = 4e-63 Identities = 118/172 (68%), Positives = 142/172 (82%), Gaps = 1/172 (0%) Frame = +1 Query: 13 MATMEAXXXXXXXXXXXXXXFFGQRLSP-SIYSSLPVKSVEKPCLIVMRLKRWERKECKP 189 MA M A F GQ L P ++ S LP KS EK C IVMRLKRWERKECKP Sbjct: 1 MAAMAALQSSMAGLSLSSKSFLGQLLPPITLPSLLPGKSTEKQCPIVMRLKRWERKECKP 60 Query: 190 NSLPMLQKMHVRIGDTVKIISGHEKGKIGEVTRLFKHNSTIIIKDINLKTKHMKSREQGE 369 NSLP+L KMHV++GDTV++ISG E+GK+GE+T++FKHNST+I+KD+NLKTKH+KSRE+GE Sbjct: 61 NSLPILHKMHVKLGDTVQVISGRERGKVGEITKIFKHNSTVIVKDLNLKTKHVKSREEGE 120 Query: 370 PGQIVKVEGPVHSSNVMLYSKDQNVASRVGHKILEDGTRVRYLIKTGEIIDS 525 PGQI+K+EGP+HSSNVMLYSKDQ VASRVGHK+L++G +VRYLIKTGEIIDS Sbjct: 121 PGQIIKIEGPIHSSNVMLYSKDQKVASRVGHKVLDNGKKVRYLIKTGEIIDS 172 >ref|XP_002282889.1| PREDICTED: 50S ribosomal protein L24, chloroplastic isoform 1 [Vitis vinifera] gi|359493940|ref|XP_003634697.1| PREDICTED: 50S ribosomal protein L24, chloroplastic isoform 2 [Vitis vinifera] gi|359493942|ref|XP_003634698.1| PREDICTED: 50S ribosomal protein L24, chloroplastic isoform 3 [Vitis vinifera] gi|147860928|emb|CAN78749.1| hypothetical protein VITISV_002445 [Vitis vinifera] Length = 191 Score = 244 bits (622), Expect = 2e-62 Identities = 118/171 (69%), Positives = 138/171 (80%) Frame = +1 Query: 13 MATMEAXXXXXXXXXXXXXXFFGQRLSPSIYSSLPVKSVEKPCLIVMRLKRWERKECKPN 192 MA M A F GQ SP +Y SL KS EKPC IVMRLKRWERKECKPN Sbjct: 1 MAAMAALQSSFTSLSLSSNSFLGQPFSPLLYPSL-AKSTEKPCPIVMRLKRWERKECKPN 59 Query: 193 SLPMLQKMHVRIGDTVKIISGHEKGKIGEVTRLFKHNSTIIIKDINLKTKHMKSREQGEP 372 SLP+L KMHV++GDTVKIISG EKG+ GE++++F+HNST+++KDINLKTKH+K R + EP Sbjct: 60 SLPVLHKMHVKVGDTVKIISGREKGRTGEISKIFRHNSTVVVKDINLKTKHVKGRGEDEP 119 Query: 373 GQIVKVEGPVHSSNVMLYSKDQNVASRVGHKILEDGTRVRYLIKTGEIIDS 525 GQI+K+E P+HSSNVMLYSK+QNVASRVGHKILE+G RVRYLIKTGEIIDS Sbjct: 120 GQIIKIEAPIHSSNVMLYSKEQNVASRVGHKILENGKRVRYLIKTGEIIDS 170 >ref|XP_003596594.1| 50S ribosomal protein L24 [Medicago truncatula] gi|355485642|gb|AES66845.1| 50S ribosomal protein L24 [Medicago truncatula] gi|388513937|gb|AFK45030.1| unknown [Medicago truncatula] Length = 194 Score = 243 bits (619), Expect = 4e-62 Identities = 113/152 (74%), Positives = 137/152 (90%), Gaps = 1/152 (0%) Frame = +1 Query: 73 FFGQRLSPSIYSSL-PVKSVEKPCLIVMRLKRWERKECKPNSLPMLQKMHVRIGDTVKII 249 FFGQ LSP S L P K +K C IVM+LKRWERKECKPNSLP+L K+HV++GDTVK+I Sbjct: 23 FFGQPLSPITLSPLLPGKPTDKQCRIVMKLKRWERKECKPNSLPVLHKLHVKVGDTVKVI 82 Query: 250 SGHEKGKIGEVTRLFKHNSTIIIKDINLKTKHMKSREQGEPGQIVKVEGPVHSSNVMLYS 429 SGHEKG+IGEVT++FKHNSTII+KDINLKTKH+KSR++GEPGQI K+EGP+HSSNVMLYS Sbjct: 83 SGHEKGQIGEVTKIFKHNSTIIVKDINLKTKHVKSRQEGEPGQINKIEGPIHSSNVMLYS 142 Query: 430 KDQNVASRVGHKILEDGTRVRYLIKTGEIIDS 525 K++NV SRVGHK++++G +VRYLIKTGE+IDS Sbjct: 143 KEKNVVSRVGHKVIDNGKKVRYLIKTGEVIDS 174