BLASTX nr result

ID: Coptis21_contig00014824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014824
         (1110 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containi...   385   e-105
emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]   385   e-105
ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containi...   382   e-103
ref|XP_002317747.1| predicted protein [Populus trichocarpa] gi|2...   375   e-101
ref|XP_002523294.1| pentatricopeptide repeat-containing protein,...   363   e-101

>ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
            mitochondrial [Vitis vinifera]
            gi|296089757|emb|CBI39576.3| unnamed protein product
            [Vitis vinifera]
          Length = 586

 Score =  385 bits (990), Expect = e-105
 Identities = 172/240 (71%), Positives = 209/240 (87%)
 Frame = +2

Query: 2    DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
            D+V A++VF EIL +GW+PD TTYT+LMDGY K+GRF++AVKVMD+MEEN VEPND+T+G
Sbjct: 291  DMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYG 350

Query: 182  VMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKT 361
            V+IE  CKEKKSGE LNLL DM EK+Y+P+S LCC+VID+LCE+GKVE AC +W+KLLK 
Sbjct: 351  VIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKK 410

Query: 362  NCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSIPSVITYNTLIEGMCERGELQEAG 541
            NCTPDNAI+STLI+WLCKEGK+WEARKLF+EFEKGSIPS +TYN LI GMCE GEL EA 
Sbjct: 411  NCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAA 470

Query: 542  RLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL 721
            RLWD MVE+GCVP+ FTYN+LIKGFCK G   EG++++E+M++ G LPNK+TY IL EGL
Sbjct: 471  RLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAILLEGL 530



 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 72/307 (23%)
 Frame = +2

Query: 14   AKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVM--DDMEENGVEPNDITFGVM 187
            A + F  I   G  P   ++  L++  ++  RF + V +M  +  ++ G+ PN  T  ++
Sbjct: 189  AIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF-DLVHLMFKNCRKKFGIVPNVFTCNIL 247

Query: 188  IEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKTNC 367
            ++ LCK+     A+ +L +M    ++PN      ++      G +  A  ++ ++L    
Sbjct: 248  VKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGW 307

Query: 368  TPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSI-PSVITYNTLIEG------------ 508
             PD    + L+   CK+G+  +A K+ +E E+  + P+ +TY  +IE             
Sbjct: 308  VPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLN 367

Query: 509  -----------------------MCERGELQEAGRLWDEMVERGC--------------- 574
                                   +CE G+++ A  LW +++++ C               
Sbjct: 368  LLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLC 427

Query: 575  -------------------VPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKST 697
                               +PS  TYN LI G C+ G++ E  +L ++M+EKG +PN  T
Sbjct: 428  KEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFT 487

Query: 698  YFILAEG 718
            Y +L +G
Sbjct: 488  YNMLIKG 494



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 43/184 (23%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
 Frame = +2

Query: 173 TFGVMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKL 352
           T+  MIE L K +       L+  + + +      L   VI      G+ + A   + ++
Sbjct: 137 TYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRI 196

Query: 353 LKTNCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEK--GSIPSVITYNTLIEGMCERGE 526
                 P     +TL+  L +  +      +F    K  G +P+V T N L++ +C++ +
Sbjct: 197 PSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKND 256

Query: 527 LQEAGRLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFI 706
           +  A R+ +EM   G +P+V TY  ++ G+   G +    ++  +++++G +P+ +TY I
Sbjct: 257 IDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTI 316

Query: 707 LAEG 718
           L +G
Sbjct: 317 LMDG 320



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 30/79 (37%), Positives = 52/79 (65%)
 Frame = +2

Query: 2   DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
           +L EA +++D ++ KG +P+A TY +L+ G+ K G   E ++VM++M +NG  PN  T+ 
Sbjct: 465 ELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYA 524

Query: 182 VMIEGLCKEKKSGEALNLL 238
           +++EGL +    GE  N+L
Sbjct: 525 ILLEGLYELGLEGEVTNVL 543


>emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
          Length = 844

 Score =  385 bits (990), Expect = e-105
 Identities = 172/240 (71%), Positives = 209/240 (87%)
 Frame = +2

Query: 2    DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
            D+V A++VF EIL +GW+PD TTYT+LMDGY K+GRF++AVKVMD+MEEN VEPND+T+G
Sbjct: 291  DMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYG 350

Query: 182  VMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKT 361
            V+IE  CKEKKSGE LNLL DM EK+Y+P+S LCC+VID+LCE+GKVE AC +W+KLLK 
Sbjct: 351  VIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKK 410

Query: 362  NCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSIPSVITYNTLIEGMCERGELQEAG 541
            NCTPDNAI+STLI+WLCKEGK+WEARKLF+EFEKGSIPS +TYN LI GMCE GEL EA 
Sbjct: 411  NCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAA 470

Query: 542  RLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL 721
            RLWD MVE+GCVP+ FTYN+LIKGFCK G   EG++++E+M++ G LPNK+TY IL EGL
Sbjct: 471  RLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAILLEGL 530



 Score = 94.4 bits (233), Expect = 5e-17
 Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 72/307 (23%)
 Frame = +2

Query: 14   AKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVM--DDMEENGVEPNDITFGVM 187
            A + F  I   G  P   ++  L++  ++  RF + V +M  +  ++ G+ PN  T  ++
Sbjct: 189  AIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF-DLVHLMFKNCRKKFGIVPNVFTCNIL 247

Query: 188  IEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKTNC 367
            ++ LCK+     A+ +L +M    ++PN      ++      G +  A  ++ ++L    
Sbjct: 248  VKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGW 307

Query: 368  TPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSI-PSVITYNTLIEG------------ 508
             PD    + L+   CK+G+  +A K+ +E E+  + P+ +TY  +IE             
Sbjct: 308  VPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLN 367

Query: 509  -----------------------MCERGELQEAGRLWDEMVERGC--------------- 574
                                   +CE G+++ A  LW +++++ C               
Sbjct: 368  LLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLC 427

Query: 575  -------------------VPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKST 697
                               +PS  TYN LI G C+ G++ E  +L ++M+EKG +PN  T
Sbjct: 428  KEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFT 487

Query: 698  YFILAEG 718
            Y +L +G
Sbjct: 488  YNMLIKG 494



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 43/184 (23%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
 Frame = +2

Query: 173 TFGVMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKL 352
           T+  MIE L K +       L+  + + +      L   VI      G+ + A   + ++
Sbjct: 137 TYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRI 196

Query: 353 LKTNCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEK--GSIPSVITYNTLIEGMCERGE 526
                 P     +TL+  L +  +      +F    K  G +P+V T N L++ +C++ +
Sbjct: 197 PSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKND 256

Query: 527 LQEAGRLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFI 706
           +  A R+ +EM   G +P+V TY  ++ G+   G +    ++  +++++G +P+ +TY I
Sbjct: 257 IDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTI 316

Query: 707 LAEG 718
           L +G
Sbjct: 317 LMDG 320



 Score = 67.0 bits (162), Expect = 8e-09
 Identities = 30/79 (37%), Positives = 52/79 (65%)
 Frame = +2

Query: 2   DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
           +L EA +++D ++ KG +P+A TY +L+ G+ K G   E ++VM++M +NG  PN  T+ 
Sbjct: 465 ELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYA 524

Query: 182 VMIEGLCKEKKSGEALNLL 238
           +++EGL +    GE  N+L
Sbjct: 525 ILLEGLYELGLEGEVTNVL 543


>ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
           gi|449492939|ref|XP_004159147.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Cucumis sativus]
          Length = 535

 Score =  382 bits (980), Expect = e-103
 Identities = 175/247 (70%), Positives = 214/247 (86%)
 Frame = +2

Query: 2   DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
           D++ AK+VF E+   GW+PDATTYT+LMDGY+KQGRF +AVKVMD+MEENGVEPNDIT+G
Sbjct: 242 DMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYG 301

Query: 182 VMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKT 361
           V+I G CKE+KSGEALNLL DM EK+Y+PNS LCCKVIDVLC +G+V++AC MW KLLK 
Sbjct: 302 VIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKK 361

Query: 362 NCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSIPSVITYNTLIEGMCERGELQEAG 541
           NCTPDNAI+STLI+WLCKEG IWEARKLFNEFE+G+I S++TYNTLI GMCE GEL EA 
Sbjct: 362 NCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTISSLLTYNTLIAGMCEMGELCEAA 421

Query: 542 RLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL 721
           RLWD+M+E+GCVP+ FTYN+LIKGF K GK  E +K++E+M++KG L N+STY IL EGL
Sbjct: 422 RLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGL 481

Query: 722 *IREGRR 742
            ++ G+R
Sbjct: 482 -LKLGKR 487



 Score = 90.9 bits (224), Expect = 5e-16
 Identities = 71/307 (23%), Positives = 131/307 (42%), Gaps = 72/307 (23%)
 Frame = +2

Query: 14   AKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEEN--GVEPNDITFGVM 187
            A K F  I   G      +   L++  ++  RF  +V ++    ++  GV PN  T  ++
Sbjct: 140  ALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRF-SSVHLLFKYSKSKFGVVPNVFTCNIL 198

Query: 188  IEGLCKEK--------------------------------KSGE---ALNLLGDMFEKEY 262
            I+ LCK+                                   G+   A  + G++F+  +
Sbjct: 199  IKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGW 258

Query: 263  VPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKTNCTPDNAISSTLIYWLCKEGKIWEARK 442
            +P++     ++D   + G+  DA  +  ++ +    P++     +I   CKE K  EA  
Sbjct: 259  LPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALN 318

Query: 443  LFNE-FEKGSIPSVITYNTLIEGMCERGELQEAGRLWDEMVERGCVP------------- 580
            L N+  EK  IP+      +I+ +C  G ++EA ++W++++++ C P             
Sbjct: 319  LLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLC 378

Query: 581  ---------------------SVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKST 697
                                 S+ TYN LI G C+ G++ E  +L +DM+EKG +PN+ T
Sbjct: 379  KEGNIWEARKLFNEFERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFT 438

Query: 698  YFILAEG 718
            Y +L +G
Sbjct: 439  YNMLIKG 445



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 35/119 (29%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
 Frame = +2

Query: 389 STLIYWLCKEGKIWEARKLF--NEFEKGSIPSVITYNTLIEGMCERGELQEAGRLWDEMV 562
           +TL+  L +  +      LF  ++ + G +P+V T N LI+ +C++ +++ A +++DEM 
Sbjct: 160 NTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMP 219

Query: 563 ERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL*IREGR 739
             G VP+V TY  ++ G+   G +    ++  ++ + G LP+ +TY IL +G  +++GR
Sbjct: 220 SMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGY-VKQGR 277



 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 31/79 (39%), Positives = 54/79 (68%)
 Frame = +2

Query: 2   DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
           +L EA +++D++L KG +P+  TY +L+ G+LK G+  E +KV+++M + G   N+ T+ 
Sbjct: 416 ELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYL 475

Query: 182 VMIEGLCKEKKSGEALNLL 238
           +++EGL K  K  E LN+L
Sbjct: 476 ILVEGLLKLGKREELLNIL 494


>ref|XP_002317747.1| predicted protein [Populus trichocarpa] gi|222858420|gb|EEE95967.1|
           predicted protein [Populus trichocarpa]
          Length = 498

 Score =  375 bits (963), Expect = e-101
 Identities = 171/240 (71%), Positives = 209/240 (87%)
 Frame = +2

Query: 2   DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
           DLV A+KVF EI  KGW+PDATTYTVLM GY KQGR  +A+KVMD+ME NGVEPN++T+G
Sbjct: 208 DLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYG 267

Query: 182 VMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKT 361
           VMI+  CKEKKSGEA NL+ DM +K+++P+S LCCKVIDVLCEDGKVE+AC +W+++L+ 
Sbjct: 268 VMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEK 327

Query: 362 NCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSIPSVITYNTLIEGMCERGELQEAG 541
           NC PDNAI STLI+WLCKEGK+WEARKLF+EFE+G+IPS++TYNTLI GMCERGEL EAG
Sbjct: 328 NCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQGTIPSLMTYNTLIAGMCERGELNEAG 387

Query: 542 RLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL 721
           RLWD+MVE+ C P+ FTYN+LIKGF KAG V EGV++LE+M++ G LPNKSTY +L EGL
Sbjct: 388 RLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGL 447



 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 39/108 (36%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
 Frame = +2

Query: 395 LIYWLCKEGKIWEARKLFNEFEK-GSIPSVITYNTLIEGMCERGELQEAGRLWDEMVERG 571
           LI  LCK+  +  A K+F+E    G IP+++TY T++ G   RG+L  A +++ E+ ++G
Sbjct: 164 LIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKG 223

Query: 572 CVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAE 715
            +P   TY VL+ G+CK G++S+ +K++++M   G  PN+ TY ++ +
Sbjct: 224 WLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMID 271



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 31/105 (29%), Positives = 62/105 (59%)
 Frame = +2

Query: 464 GSIPSVITYNTLIEGMCERGELQEAGRLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEG 643
           G +P+V ++N LI+ +C++ +++ A +++DEM   G +P++ TY  ++ GF   G +   
Sbjct: 153 GVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNA 212

Query: 644 VKLLEDMMEKGSLPNKSTYFILAEGL*IREGRRGYECSHYGNLEW 778
            K+  ++ +KG LP+ +TY +L  G   ++GR         N+E+
Sbjct: 213 EKVFSEISDKGWLPDATTYTVLMVGY-CKQGRLSDAIKVMDNMEY 256



 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 36/106 (33%), Positives = 55/106 (51%)
 Frame = +2

Query: 11  EAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFGVMI 190
           EA+K+FDE   +G IP   TY  L+ G  ++G   EA ++ DDM E    PN  T+ ++I
Sbjct: 351 EARKLFDEF-EQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLI 409

Query: 191 EGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVED 328
           +G  K     E + +L +M +   +PN      +I+ L E G   D
Sbjct: 410 KGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGD 455


>ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537382|gb|EEF39010.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 544

 Score =  363 bits (932), Expect(2) = e-101
 Identities = 159/240 (66%), Positives = 203/240 (84%)
 Frame = +2

Query: 2   DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
           D+V A KVF E+  +GW+PDATTYT+LM+GY +QGR  +A+K+MDDM ENGVEPN++T+G
Sbjct: 251 DMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYG 310

Query: 182 VMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKT 361
           VM+E  CKEKK+GEA NLL DM E++YVP+S LCCKVIDVLCE GK+E+AC +W+++LK 
Sbjct: 311 VMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKK 370

Query: 362 NCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSIPSVITYNTLIEGMCERGELQEAG 541
           NC PDNAI STLI+WLCKEGK+WEARKLF EFE+G+IPS++TYNTLI GMCE+GEL EAG
Sbjct: 371 NCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSLLTYNTLIAGMCEKGELSEAG 430

Query: 542 RLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL 721
           +LWD+M+E+G  P+ FTYN+LIKGF K G   EG+++LE+M++   +PNKSTY IL E L
Sbjct: 431 KLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEEL 490



 Score = 32.3 bits (72), Expect(2) = e-101
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +3

Query: 729 GKGEEVMNALTMATSSGWISLDTDSWGVFVRKVLANSENWRPILDS 866
           G   EV   ++MA +SG +  D+DSW +F+ K + N +     LDS
Sbjct: 494 GMEGEVDKVVSMAMASGGV--DSDSWDLFLNKAVGNLDRGSKALDS 537



 Score =  127 bits (318), Expect = 6e-27
 Identities = 75/259 (28%), Positives = 126/259 (48%), Gaps = 35/259 (13%)
 Frame = +2

Query: 47  GWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFGVMIEGLCKEKKSGEA 226
           G +P+  T  +L+    K+     AVKV+D+M   G+ PN +T+  ++ G         A
Sbjct: 196 GVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNA 255

Query: 227 LNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKTNCTPDNAISSTLIYW 406
             + G++F++ ++P++     +++  CE G++ DA  +   + +    P+      ++  
Sbjct: 256 NKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEA 315

Query: 407 LCKEGKIWEARKLFNE-FEKGSIPSVITYNTLIEGMCERGELQEAGRLWDEMV------- 562
            CKE K  EAR L ++  E+  +PS      +I+ +CE G+++EA  LW  M+       
Sbjct: 316 YCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPD 375

Query: 563 ---------------------------ERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLED 661
                                      ERG +PS+ TYN LI G C+ G++SE  KL +D
Sbjct: 376 NAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDD 435

Query: 662 MMEKGSLPNKSTYFILAEG 718
           MMEKG  PN  TY +L +G
Sbjct: 436 MMEKGYKPNAFTYNMLIKG 454



 Score = 71.2 bits (173), Expect = 4e-10
 Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
 Frame = +2

Query: 11  EAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFGVMI 190
           EA+K+F E   +G IP   TY  L+ G  ++G   EA K+ DDM E G +PN  T+ ++I
Sbjct: 394 EARKLFGEF-ERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLI 452

Query: 191 EGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCE---DGKVEDACSM 340
           +G  K   + E + +L +M +   +PN      +I+ LC+   +G+V+   SM
Sbjct: 453 KGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSM 505



 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 28/74 (37%), Positives = 49/74 (66%)
 Frame = +2

Query: 2   DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
           +L EA K++D+++ KG+ P+A TY +L+ G+ K G   E ++++++M +N   PN  T+ 
Sbjct: 425 ELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYA 484

Query: 182 VMIEGLCKEKKSGE 223
           ++IE LCK    GE
Sbjct: 485 ILIEELCKMGMEGE 498


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