BLASTX nr result
ID: Coptis21_contig00014824
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014824 (1110 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containi... 385 e-105 emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera] 385 e-105 ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containi... 382 e-103 ref|XP_002317747.1| predicted protein [Populus trichocarpa] gi|2... 375 e-101 ref|XP_002523294.1| pentatricopeptide repeat-containing protein,... 363 e-101 >ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Vitis vinifera] gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera] Length = 586 Score = 385 bits (990), Expect = e-105 Identities = 172/240 (71%), Positives = 209/240 (87%) Frame = +2 Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181 D+V A++VF EIL +GW+PD TTYT+LMDGY K+GRF++AVKVMD+MEEN VEPND+T+G Sbjct: 291 DMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYG 350 Query: 182 VMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKT 361 V+IE CKEKKSGE LNLL DM EK+Y+P+S LCC+VID+LCE+GKVE AC +W+KLLK Sbjct: 351 VIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKK 410 Query: 362 NCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSIPSVITYNTLIEGMCERGELQEAG 541 NCTPDNAI+STLI+WLCKEGK+WEARKLF+EFEKGSIPS +TYN LI GMCE GEL EA Sbjct: 411 NCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAA 470 Query: 542 RLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL 721 RLWD MVE+GCVP+ FTYN+LIKGFCK G EG++++E+M++ G LPNK+TY IL EGL Sbjct: 471 RLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAILLEGL 530 Score = 94.4 bits (233), Expect = 5e-17 Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 72/307 (23%) Frame = +2 Query: 14 AKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVM--DDMEENGVEPNDITFGVM 187 A + F I G P ++ L++ ++ RF + V +M + ++ G+ PN T ++ Sbjct: 189 AIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF-DLVHLMFKNCRKKFGIVPNVFTCNIL 247 Query: 188 IEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKTNC 367 ++ LCK+ A+ +L +M ++PN ++ G + A ++ ++L Sbjct: 248 VKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGW 307 Query: 368 TPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSI-PSVITYNTLIEG------------ 508 PD + L+ CK+G+ +A K+ +E E+ + P+ +TY +IE Sbjct: 308 VPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLN 367 Query: 509 -----------------------MCERGELQEAGRLWDEMVERGC--------------- 574 +CE G+++ A LW +++++ C Sbjct: 368 LLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLC 427 Query: 575 -------------------VPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKST 697 +PS TYN LI G C+ G++ E +L ++M+EKG +PN T Sbjct: 428 KEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFT 487 Query: 698 YFILAEG 718 Y +L +G Sbjct: 488 YNMLIKG 494 Score = 67.0 bits (162), Expect = 8e-09 Identities = 43/184 (23%), Positives = 87/184 (47%), Gaps = 2/184 (1%) Frame = +2 Query: 173 TFGVMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKL 352 T+ MIE L K + L+ + + + L VI G+ + A + ++ Sbjct: 137 TYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRI 196 Query: 353 LKTNCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEK--GSIPSVITYNTLIEGMCERGE 526 P +TL+ L + + +F K G +P+V T N L++ +C++ + Sbjct: 197 PSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKND 256 Query: 527 LQEAGRLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFI 706 + A R+ +EM G +P+V TY ++ G+ G + ++ +++++G +P+ +TY I Sbjct: 257 IDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTI 316 Query: 707 LAEG 718 L +G Sbjct: 317 LMDG 320 Score = 67.0 bits (162), Expect = 8e-09 Identities = 30/79 (37%), Positives = 52/79 (65%) Frame = +2 Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181 +L EA +++D ++ KG +P+A TY +L+ G+ K G E ++VM++M +NG PN T+ Sbjct: 465 ELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYA 524 Query: 182 VMIEGLCKEKKSGEALNLL 238 +++EGL + GE N+L Sbjct: 525 ILLEGLYELGLEGEVTNVL 543 >emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera] Length = 844 Score = 385 bits (990), Expect = e-105 Identities = 172/240 (71%), Positives = 209/240 (87%) Frame = +2 Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181 D+V A++VF EIL +GW+PD TTYT+LMDGY K+GRF++AVKVMD+MEEN VEPND+T+G Sbjct: 291 DMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYG 350 Query: 182 VMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKT 361 V+IE CKEKKSGE LNLL DM EK+Y+P+S LCC+VID+LCE+GKVE AC +W+KLLK Sbjct: 351 VIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKK 410 Query: 362 NCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSIPSVITYNTLIEGMCERGELQEAG 541 NCTPDNAI+STLI+WLCKEGK+WEARKLF+EFEKGSIPS +TYN LI GMCE GEL EA Sbjct: 411 NCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAA 470 Query: 542 RLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL 721 RLWD MVE+GCVP+ FTYN+LIKGFCK G EG++++E+M++ G LPNK+TY IL EGL Sbjct: 471 RLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAILLEGL 530 Score = 94.4 bits (233), Expect = 5e-17 Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 72/307 (23%) Frame = +2 Query: 14 AKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVM--DDMEENGVEPNDITFGVM 187 A + F I G P ++ L++ ++ RF + V +M + ++ G+ PN T ++ Sbjct: 189 AIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF-DLVHLMFKNCRKKFGIVPNVFTCNIL 247 Query: 188 IEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKTNC 367 ++ LCK+ A+ +L +M ++PN ++ G + A ++ ++L Sbjct: 248 VKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGW 307 Query: 368 TPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSI-PSVITYNTLIEG------------ 508 PD + L+ CK+G+ +A K+ +E E+ + P+ +TY +IE Sbjct: 308 VPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLN 367 Query: 509 -----------------------MCERGELQEAGRLWDEMVERGC--------------- 574 +CE G+++ A LW +++++ C Sbjct: 368 LLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLC 427 Query: 575 -------------------VPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKST 697 +PS TYN LI G C+ G++ E +L ++M+EKG +PN T Sbjct: 428 KEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFT 487 Query: 698 YFILAEG 718 Y +L +G Sbjct: 488 YNMLIKG 494 Score = 67.0 bits (162), Expect = 8e-09 Identities = 43/184 (23%), Positives = 87/184 (47%), Gaps = 2/184 (1%) Frame = +2 Query: 173 TFGVMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKL 352 T+ MIE L K + L+ + + + L VI G+ + A + ++ Sbjct: 137 TYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRI 196 Query: 353 LKTNCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEK--GSIPSVITYNTLIEGMCERGE 526 P +TL+ L + + +F K G +P+V T N L++ +C++ + Sbjct: 197 PSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKND 256 Query: 527 LQEAGRLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFI 706 + A R+ +EM G +P+V TY ++ G+ G + ++ +++++G +P+ +TY I Sbjct: 257 IDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTI 316 Query: 707 LAEG 718 L +G Sbjct: 317 LMDG 320 Score = 67.0 bits (162), Expect = 8e-09 Identities = 30/79 (37%), Positives = 52/79 (65%) Frame = +2 Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181 +L EA +++D ++ KG +P+A TY +L+ G+ K G E ++VM++M +NG PN T+ Sbjct: 465 ELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYA 524 Query: 182 VMIEGLCKEKKSGEALNLL 238 +++EGL + GE N+L Sbjct: 525 ILLEGLYELGLEGEVTNVL 543 >ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420, mitochondrial-like [Cucumis sativus] gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420, mitochondrial-like [Cucumis sativus] Length = 535 Score = 382 bits (980), Expect = e-103 Identities = 175/247 (70%), Positives = 214/247 (86%) Frame = +2 Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181 D++ AK+VF E+ GW+PDATTYT+LMDGY+KQGRF +AVKVMD+MEENGVEPNDIT+G Sbjct: 242 DMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYG 301 Query: 182 VMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKT 361 V+I G CKE+KSGEALNLL DM EK+Y+PNS LCCKVIDVLC +G+V++AC MW KLLK Sbjct: 302 VIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKK 361 Query: 362 NCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSIPSVITYNTLIEGMCERGELQEAG 541 NCTPDNAI+STLI+WLCKEG IWEARKLFNEFE+G+I S++TYNTLI GMCE GEL EA Sbjct: 362 NCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTISSLLTYNTLIAGMCEMGELCEAA 421 Query: 542 RLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL 721 RLWD+M+E+GCVP+ FTYN+LIKGF K GK E +K++E+M++KG L N+STY IL EGL Sbjct: 422 RLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGL 481 Query: 722 *IREGRR 742 ++ G+R Sbjct: 482 -LKLGKR 487 Score = 90.9 bits (224), Expect = 5e-16 Identities = 71/307 (23%), Positives = 131/307 (42%), Gaps = 72/307 (23%) Frame = +2 Query: 14 AKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEEN--GVEPNDITFGVM 187 A K F I G + L++ ++ RF +V ++ ++ GV PN T ++ Sbjct: 140 ALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRF-SSVHLLFKYSKSKFGVVPNVFTCNIL 198 Query: 188 IEGLCKEK--------------------------------KSGE---ALNLLGDMFEKEY 262 I+ LCK+ G+ A + G++F+ + Sbjct: 199 IKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGW 258 Query: 263 VPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKTNCTPDNAISSTLIYWLCKEGKIWEARK 442 +P++ ++D + G+ DA + ++ + P++ +I CKE K EA Sbjct: 259 LPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALN 318 Query: 443 LFNE-FEKGSIPSVITYNTLIEGMCERGELQEAGRLWDEMVERGCVP------------- 580 L N+ EK IP+ +I+ +C G ++EA ++W++++++ C P Sbjct: 319 LLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLC 378 Query: 581 ---------------------SVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKST 697 S+ TYN LI G C+ G++ E +L +DM+EKG +PN+ T Sbjct: 379 KEGNIWEARKLFNEFERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFT 438 Query: 698 YFILAEG 718 Y +L +G Sbjct: 439 YNMLIKG 445 Score = 68.9 bits (167), Expect = 2e-09 Identities = 35/119 (29%), Positives = 70/119 (58%), Gaps = 2/119 (1%) Frame = +2 Query: 389 STLIYWLCKEGKIWEARKLF--NEFEKGSIPSVITYNTLIEGMCERGELQEAGRLWDEMV 562 +TL+ L + + LF ++ + G +P+V T N LI+ +C++ +++ A +++DEM Sbjct: 160 NTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMP 219 Query: 563 ERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL*IREGR 739 G VP+V TY ++ G+ G + ++ ++ + G LP+ +TY IL +G +++GR Sbjct: 220 SMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGY-VKQGR 277 Score = 66.2 bits (160), Expect = 1e-08 Identities = 31/79 (39%), Positives = 54/79 (68%) Frame = +2 Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181 +L EA +++D++L KG +P+ TY +L+ G+LK G+ E +KV+++M + G N+ T+ Sbjct: 416 ELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYL 475 Query: 182 VMIEGLCKEKKSGEALNLL 238 +++EGL K K E LN+L Sbjct: 476 ILVEGLLKLGKREELLNIL 494 >ref|XP_002317747.1| predicted protein [Populus trichocarpa] gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa] Length = 498 Score = 375 bits (963), Expect = e-101 Identities = 171/240 (71%), Positives = 209/240 (87%) Frame = +2 Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181 DLV A+KVF EI KGW+PDATTYTVLM GY KQGR +A+KVMD+ME NGVEPN++T+G Sbjct: 208 DLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYG 267 Query: 182 VMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKT 361 VMI+ CKEKKSGEA NL+ DM +K+++P+S LCCKVIDVLCEDGKVE+AC +W+++L+ Sbjct: 268 VMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEK 327 Query: 362 NCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSIPSVITYNTLIEGMCERGELQEAG 541 NC PDNAI STLI+WLCKEGK+WEARKLF+EFE+G+IPS++TYNTLI GMCERGEL EAG Sbjct: 328 NCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQGTIPSLMTYNTLIAGMCERGELNEAG 387 Query: 542 RLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL 721 RLWD+MVE+ C P+ FTYN+LIKGF KAG V EGV++LE+M++ G LPNKSTY +L EGL Sbjct: 388 RLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGL 447 Score = 85.5 bits (210), Expect = 2e-14 Identities = 39/108 (36%), Positives = 70/108 (64%), Gaps = 1/108 (0%) Frame = +2 Query: 395 LIYWLCKEGKIWEARKLFNEFEK-GSIPSVITYNTLIEGMCERGELQEAGRLWDEMVERG 571 LI LCK+ + A K+F+E G IP+++TY T++ G RG+L A +++ E+ ++G Sbjct: 164 LIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKG 223 Query: 572 CVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAE 715 +P TY VL+ G+CK G++S+ +K++++M G PN+ TY ++ + Sbjct: 224 WLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMID 271 Score = 68.9 bits (167), Expect = 2e-09 Identities = 31/105 (29%), Positives = 62/105 (59%) Frame = +2 Query: 464 GSIPSVITYNTLIEGMCERGELQEAGRLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEG 643 G +P+V ++N LI+ +C++ +++ A +++DEM G +P++ TY ++ GF G + Sbjct: 153 GVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNA 212 Query: 644 VKLLEDMMEKGSLPNKSTYFILAEGL*IREGRRGYECSHYGNLEW 778 K+ ++ +KG LP+ +TY +L G ++GR N+E+ Sbjct: 213 EKVFSEISDKGWLPDATTYTVLMVGY-CKQGRLSDAIKVMDNMEY 256 Score = 62.8 bits (151), Expect = 1e-07 Identities = 36/106 (33%), Positives = 55/106 (51%) Frame = +2 Query: 11 EAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFGVMI 190 EA+K+FDE +G IP TY L+ G ++G EA ++ DDM E PN T+ ++I Sbjct: 351 EARKLFDEF-EQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLI 409 Query: 191 EGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVED 328 +G K E + +L +M + +PN +I+ L E G D Sbjct: 410 KGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGD 455 >ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 544 Score = 363 bits (932), Expect(2) = e-101 Identities = 159/240 (66%), Positives = 203/240 (84%) Frame = +2 Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181 D+V A KVF E+ +GW+PDATTYT+LM+GY +QGR +A+K+MDDM ENGVEPN++T+G Sbjct: 251 DMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYG 310 Query: 182 VMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKT 361 VM+E CKEKK+GEA NLL DM E++YVP+S LCCKVIDVLCE GK+E+AC +W+++LK Sbjct: 311 VMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKK 370 Query: 362 NCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSIPSVITYNTLIEGMCERGELQEAG 541 NC PDNAI STLI+WLCKEGK+WEARKLF EFE+G+IPS++TYNTLI GMCE+GEL EAG Sbjct: 371 NCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSLLTYNTLIAGMCEKGELSEAG 430 Query: 542 RLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL 721 +LWD+M+E+G P+ FTYN+LIKGF K G EG+++LE+M++ +PNKSTY IL E L Sbjct: 431 KLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEEL 490 Score = 32.3 bits (72), Expect(2) = e-101 Identities = 17/46 (36%), Positives = 26/46 (56%) Frame = +3 Query: 729 GKGEEVMNALTMATSSGWISLDTDSWGVFVRKVLANSENWRPILDS 866 G EV ++MA +SG + D+DSW +F+ K + N + LDS Sbjct: 494 GMEGEVDKVVSMAMASGGV--DSDSWDLFLNKAVGNLDRGSKALDS 537 Score = 127 bits (318), Expect = 6e-27 Identities = 75/259 (28%), Positives = 126/259 (48%), Gaps = 35/259 (13%) Frame = +2 Query: 47 GWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFGVMIEGLCKEKKSGEA 226 G +P+ T +L+ K+ AVKV+D+M G+ PN +T+ ++ G A Sbjct: 196 GVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNA 255 Query: 227 LNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKTNCTPDNAISSTLIYW 406 + G++F++ ++P++ +++ CE G++ DA + + + P+ ++ Sbjct: 256 NKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEA 315 Query: 407 LCKEGKIWEARKLFNE-FEKGSIPSVITYNTLIEGMCERGELQEAGRLWDEMV------- 562 CKE K EAR L ++ E+ +PS +I+ +CE G+++EA LW M+ Sbjct: 316 YCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPD 375 Query: 563 ---------------------------ERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLED 661 ERG +PS+ TYN LI G C+ G++SE KL +D Sbjct: 376 NAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDD 435 Query: 662 MMEKGSLPNKSTYFILAEG 718 MMEKG PN TY +L +G Sbjct: 436 MMEKGYKPNAFTYNMLIKG 454 Score = 71.2 bits (173), Expect = 4e-10 Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%) Frame = +2 Query: 11 EAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFGVMI 190 EA+K+F E +G IP TY L+ G ++G EA K+ DDM E G +PN T+ ++I Sbjct: 394 EARKLFGEF-ERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLI 452 Query: 191 EGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCE---DGKVEDACSM 340 +G K + E + +L +M + +PN +I+ LC+ +G+V+ SM Sbjct: 453 KGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSM 505 Score = 63.2 bits (152), Expect = 1e-07 Identities = 28/74 (37%), Positives = 49/74 (66%) Frame = +2 Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181 +L EA K++D+++ KG+ P+A TY +L+ G+ K G E ++++++M +N PN T+ Sbjct: 425 ELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYA 484 Query: 182 VMIEGLCKEKKSGE 223 ++IE LCK GE Sbjct: 485 ILIEELCKMGMEGE 498