BLASTX nr result
ID: Coptis21_contig00014824
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00014824
(1110 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containi... 385 e-105
emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera] 385 e-105
ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containi... 382 e-103
ref|XP_002317747.1| predicted protein [Populus trichocarpa] gi|2... 375 e-101
ref|XP_002523294.1| pentatricopeptide repeat-containing protein,... 363 e-101
>ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product
[Vitis vinifera]
Length = 586
Score = 385 bits (990), Expect = e-105
Identities = 172/240 (71%), Positives = 209/240 (87%)
Frame = +2
Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
D+V A++VF EIL +GW+PD TTYT+LMDGY K+GRF++AVKVMD+MEEN VEPND+T+G
Sbjct: 291 DMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYG 350
Query: 182 VMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKT 361
V+IE CKEKKSGE LNLL DM EK+Y+P+S LCC+VID+LCE+GKVE AC +W+KLLK
Sbjct: 351 VIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKK 410
Query: 362 NCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSIPSVITYNTLIEGMCERGELQEAG 541
NCTPDNAI+STLI+WLCKEGK+WEARKLF+EFEKGSIPS +TYN LI GMCE GEL EA
Sbjct: 411 NCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAA 470
Query: 542 RLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL 721
RLWD MVE+GCVP+ FTYN+LIKGFCK G EG++++E+M++ G LPNK+TY IL EGL
Sbjct: 471 RLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAILLEGL 530
Score = 94.4 bits (233), Expect = 5e-17
Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 72/307 (23%)
Frame = +2
Query: 14 AKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVM--DDMEENGVEPNDITFGVM 187
A + F I G P ++ L++ ++ RF + V +M + ++ G+ PN T ++
Sbjct: 189 AIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF-DLVHLMFKNCRKKFGIVPNVFTCNIL 247
Query: 188 IEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKTNC 367
++ LCK+ A+ +L +M ++PN ++ G + A ++ ++L
Sbjct: 248 VKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGW 307
Query: 368 TPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSI-PSVITYNTLIEG------------ 508
PD + L+ CK+G+ +A K+ +E E+ + P+ +TY +IE
Sbjct: 308 VPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLN 367
Query: 509 -----------------------MCERGELQEAGRLWDEMVERGC--------------- 574
+CE G+++ A LW +++++ C
Sbjct: 368 LLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLC 427
Query: 575 -------------------VPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKST 697
+PS TYN LI G C+ G++ E +L ++M+EKG +PN T
Sbjct: 428 KEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFT 487
Query: 698 YFILAEG 718
Y +L +G
Sbjct: 488 YNMLIKG 494
Score = 67.0 bits (162), Expect = 8e-09
Identities = 43/184 (23%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Frame = +2
Query: 173 TFGVMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKL 352
T+ MIE L K + L+ + + + L VI G+ + A + ++
Sbjct: 137 TYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRI 196
Query: 353 LKTNCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEK--GSIPSVITYNTLIEGMCERGE 526
P +TL+ L + + +F K G +P+V T N L++ +C++ +
Sbjct: 197 PSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKND 256
Query: 527 LQEAGRLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFI 706
+ A R+ +EM G +P+V TY ++ G+ G + ++ +++++G +P+ +TY I
Sbjct: 257 IDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTI 316
Query: 707 LAEG 718
L +G
Sbjct: 317 LMDG 320
Score = 67.0 bits (162), Expect = 8e-09
Identities = 30/79 (37%), Positives = 52/79 (65%)
Frame = +2
Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
+L EA +++D ++ KG +P+A TY +L+ G+ K G E ++VM++M +NG PN T+
Sbjct: 465 ELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYA 524
Query: 182 VMIEGLCKEKKSGEALNLL 238
+++EGL + GE N+L
Sbjct: 525 ILLEGLYELGLEGEVTNVL 543
>emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 385 bits (990), Expect = e-105
Identities = 172/240 (71%), Positives = 209/240 (87%)
Frame = +2
Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
D+V A++VF EIL +GW+PD TTYT+LMDGY K+GRF++AVKVMD+MEEN VEPND+T+G
Sbjct: 291 DMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYG 350
Query: 182 VMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKT 361
V+IE CKEKKSGE LNLL DM EK+Y+P+S LCC+VID+LCE+GKVE AC +W+KLLK
Sbjct: 351 VIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKK 410
Query: 362 NCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSIPSVITYNTLIEGMCERGELQEAG 541
NCTPDNAI+STLI+WLCKEGK+WEARKLF+EFEKGSIPS +TYN LI GMCE GEL EA
Sbjct: 411 NCTPDNAITSTLIHWLCKEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAA 470
Query: 542 RLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL 721
RLWD MVE+GCVP+ FTYN+LIKGFCK G EG++++E+M++ G LPNK+TY IL EGL
Sbjct: 471 RLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAILLEGL 530
Score = 94.4 bits (233), Expect = 5e-17
Identities = 69/307 (22%), Positives = 131/307 (42%), Gaps = 72/307 (23%)
Frame = +2
Query: 14 AKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVM--DDMEENGVEPNDITFGVM 187
A + F I G P ++ L++ ++ RF + V +M + ++ G+ PN T ++
Sbjct: 189 AIRTFLRIPSFGLQPSVRSFNTLLNTLVQNKRF-DLVHLMFKNCRKKFGIVPNVFTCNIL 247
Query: 188 IEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKTNC 367
++ LCK+ A+ +L +M ++PN ++ G + A ++ ++L
Sbjct: 248 VKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGW 307
Query: 368 TPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSI-PSVITYNTLIEG------------ 508
PD + L+ CK+G+ +A K+ +E E+ + P+ +TY +IE
Sbjct: 308 VPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLN 367
Query: 509 -----------------------MCERGELQEAGRLWDEMVERGC--------------- 574
+CE G+++ A LW +++++ C
Sbjct: 368 LLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLC 427
Query: 575 -------------------VPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKST 697
+PS TYN LI G C+ G++ E +L ++M+EKG +PN T
Sbjct: 428 KEGKVWEARKLFDEFEKGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVPNAFT 487
Query: 698 YFILAEG 718
Y +L +G
Sbjct: 488 YNMLIKG 494
Score = 67.0 bits (162), Expect = 8e-09
Identities = 43/184 (23%), Positives = 87/184 (47%), Gaps = 2/184 (1%)
Frame = +2
Query: 173 TFGVMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKL 352
T+ MIE L K + L+ + + + L VI G+ + A + ++
Sbjct: 137 TYLAMIEKLSKARAFEPMETLISQLHKSQIKCGENLFITVIRNYGFAGRPKLAIRTFLRI 196
Query: 353 LKTNCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEK--GSIPSVITYNTLIEGMCERGE 526
P +TL+ L + + +F K G +P+V T N L++ +C++ +
Sbjct: 197 PSFGLQPSVRSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKND 256
Query: 527 LQEAGRLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFI 706
+ A R+ +EM G +P+V TY ++ G+ G + ++ +++++G +P+ +TY I
Sbjct: 257 IDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTI 316
Query: 707 LAEG 718
L +G
Sbjct: 317 LMDG 320
Score = 67.0 bits (162), Expect = 8e-09
Identities = 30/79 (37%), Positives = 52/79 (65%)
Frame = +2
Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
+L EA +++D ++ KG +P+A TY +L+ G+ K G E ++VM++M +NG PN T+
Sbjct: 465 ELPEAARLWDNMVEKGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYA 524
Query: 182 VMIEGLCKEKKSGEALNLL 238
+++EGL + GE N+L
Sbjct: 525 ILLEGLYELGLEGEVTNVL 543
>ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 382 bits (980), Expect = e-103
Identities = 175/247 (70%), Positives = 214/247 (86%)
Frame = +2
Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
D++ AK+VF E+ GW+PDATTYT+LMDGY+KQGRF +AVKVMD+MEENGVEPNDIT+G
Sbjct: 242 DMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYG 301
Query: 182 VMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKT 361
V+I G CKE+KSGEALNLL DM EK+Y+PNS LCCKVIDVLC +G+V++AC MW KLLK
Sbjct: 302 VIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKK 361
Query: 362 NCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSIPSVITYNTLIEGMCERGELQEAG 541
NCTPDNAI+STLI+WLCKEG IWEARKLFNEFE+G+I S++TYNTLI GMCE GEL EA
Sbjct: 362 NCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTISSLLTYNTLIAGMCEMGELCEAA 421
Query: 542 RLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL 721
RLWD+M+E+GCVP+ FTYN+LIKGF K GK E +K++E+M++KG L N+STY IL EGL
Sbjct: 422 RLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYLILVEGL 481
Query: 722 *IREGRR 742
++ G+R
Sbjct: 482 -LKLGKR 487
Score = 90.9 bits (224), Expect = 5e-16
Identities = 71/307 (23%), Positives = 131/307 (42%), Gaps = 72/307 (23%)
Frame = +2
Query: 14 AKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEEN--GVEPNDITFGVM 187
A K F I G + L++ ++ RF +V ++ ++ GV PN T ++
Sbjct: 140 ALKTFLRIQTFGVRRSVRSLNTLLNALVQNNRF-SSVHLLFKYSKSKFGVVPNVFTCNIL 198
Query: 188 IEGLCKEK--------------------------------KSGE---ALNLLGDMFEKEY 262
I+ LCK+ G+ A + G++F+ +
Sbjct: 199 IKALCKKNDVEGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGW 258
Query: 263 VPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKTNCTPDNAISSTLIYWLCKEGKIWEARK 442
+P++ ++D + G+ DA + ++ + P++ +I CKE K EA
Sbjct: 259 LPDATTYTILMDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALN 318
Query: 443 LFNE-FEKGSIPSVITYNTLIEGMCERGELQEAGRLWDEMVERGCVP------------- 580
L N+ EK IP+ +I+ +C G ++EA ++W++++++ C P
Sbjct: 319 LLNDMLEKKYIPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLC 378
Query: 581 ---------------------SVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKST 697
S+ TYN LI G C+ G++ E +L +DM+EKG +PN+ T
Sbjct: 379 KEGNIWEARKLFNEFERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFT 438
Query: 698 YFILAEG 718
Y +L +G
Sbjct: 439 YNMLIKG 445
Score = 68.9 bits (167), Expect = 2e-09
Identities = 35/119 (29%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
Frame = +2
Query: 389 STLIYWLCKEGKIWEARKLF--NEFEKGSIPSVITYNTLIEGMCERGELQEAGRLWDEMV 562
+TL+ L + + LF ++ + G +P+V T N LI+ +C++ +++ A +++DEM
Sbjct: 160 NTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMP 219
Query: 563 ERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL*IREGR 739
G VP+V TY ++ G+ G + ++ ++ + G LP+ +TY IL +G +++GR
Sbjct: 220 SMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGY-VKQGR 277
Score = 66.2 bits (160), Expect = 1e-08
Identities = 31/79 (39%), Positives = 54/79 (68%)
Frame = +2
Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
+L EA +++D++L KG +P+ TY +L+ G+LK G+ E +KV+++M + G N+ T+
Sbjct: 416 ELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDKGCLLNESTYL 475
Query: 182 VMIEGLCKEKKSGEALNLL 238
+++EGL K K E LN+L
Sbjct: 476 ILVEGLLKLGKREELLNIL 494
>ref|XP_002317747.1| predicted protein [Populus trichocarpa] gi|222858420|gb|EEE95967.1|
predicted protein [Populus trichocarpa]
Length = 498
Score = 375 bits (963), Expect = e-101
Identities = 171/240 (71%), Positives = 209/240 (87%)
Frame = +2
Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
DLV A+KVF EI KGW+PDATTYTVLM GY KQGR +A+KVMD+ME NGVEPN++T+G
Sbjct: 208 DLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYG 267
Query: 182 VMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKT 361
VMI+ CKEKKSGEA NL+ DM +K+++P+S LCCKVIDVLCEDGKVE+AC +W+++L+
Sbjct: 268 VMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEK 327
Query: 362 NCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSIPSVITYNTLIEGMCERGELQEAG 541
NC PDNAI STLI+WLCKEGK+WEARKLF+EFE+G+IPS++TYNTLI GMCERGEL EAG
Sbjct: 328 NCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQGTIPSLMTYNTLIAGMCERGELNEAG 387
Query: 542 RLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL 721
RLWD+MVE+ C P+ FTYN+LIKGF KAG V EGV++LE+M++ G LPNKSTY +L EGL
Sbjct: 388 RLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGL 447
Score = 85.5 bits (210), Expect = 2e-14
Identities = 39/108 (36%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Frame = +2
Query: 395 LIYWLCKEGKIWEARKLFNEFEK-GSIPSVITYNTLIEGMCERGELQEAGRLWDEMVERG 571
LI LCK+ + A K+F+E G IP+++TY T++ G RG+L A +++ E+ ++G
Sbjct: 164 LIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKG 223
Query: 572 CVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAE 715
+P TY VL+ G+CK G++S+ +K++++M G PN+ TY ++ +
Sbjct: 224 WLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMID 271
Score = 68.9 bits (167), Expect = 2e-09
Identities = 31/105 (29%), Positives = 62/105 (59%)
Frame = +2
Query: 464 GSIPSVITYNTLIEGMCERGELQEAGRLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEG 643
G +P+V ++N LI+ +C++ +++ A +++DEM G +P++ TY ++ GF G +
Sbjct: 153 GVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNA 212
Query: 644 VKLLEDMMEKGSLPNKSTYFILAEGL*IREGRRGYECSHYGNLEW 778
K+ ++ +KG LP+ +TY +L G ++GR N+E+
Sbjct: 213 EKVFSEISDKGWLPDATTYTVLMVGY-CKQGRLSDAIKVMDNMEY 256
Score = 62.8 bits (151), Expect = 1e-07
Identities = 36/106 (33%), Positives = 55/106 (51%)
Frame = +2
Query: 11 EAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFGVMI 190
EA+K+FDE +G IP TY L+ G ++G EA ++ DDM E PN T+ ++I
Sbjct: 351 EARKLFDEF-EQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLI 409
Query: 191 EGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVED 328
+G K E + +L +M + +PN +I+ L E G D
Sbjct: 410 KGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGD 455
>ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223537382|gb|EEF39010.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 544
Score = 363 bits (932), Expect(2) = e-101
Identities = 159/240 (66%), Positives = 203/240 (84%)
Frame = +2
Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
D+V A KVF E+ +GW+PDATTYT+LM+GY +QGR +A+K+MDDM ENGVEPN++T+G
Sbjct: 251 DMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYG 310
Query: 182 VMIEGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKT 361
VM+E CKEKK+GEA NLL DM E++YVP+S LCCKVIDVLCE GK+E+AC +W+++LK
Sbjct: 311 VMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKK 370
Query: 362 NCTPDNAISSTLIYWLCKEGKIWEARKLFNEFEKGSIPSVITYNTLIEGMCERGELQEAG 541
NC PDNAI STLI+WLCKEGK+WEARKLF EFE+G+IPS++TYNTLI GMCE+GEL EAG
Sbjct: 371 NCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSLLTYNTLIAGMCEKGELSEAG 430
Query: 542 RLWDEMVERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLEDMMEKGSLPNKSTYFILAEGL 721
+LWD+M+E+G P+ FTYN+LIKGF K G EG+++LE+M++ +PNKSTY IL E L
Sbjct: 431 KLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEEL 490
Score = 32.3 bits (72), Expect(2) = e-101
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 729 GKGEEVMNALTMATSSGWISLDTDSWGVFVRKVLANSENWRPILDS 866
G EV ++MA +SG + D+DSW +F+ K + N + LDS
Sbjct: 494 GMEGEVDKVVSMAMASGGV--DSDSWDLFLNKAVGNLDRGSKALDS 537
Score = 127 bits (318), Expect = 6e-27
Identities = 75/259 (28%), Positives = 126/259 (48%), Gaps = 35/259 (13%)
Frame = +2
Query: 47 GWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFGVMIEGLCKEKKSGEA 226
G +P+ T +L+ K+ AVKV+D+M G+ PN +T+ ++ G A
Sbjct: 196 GVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNA 255
Query: 227 LNLLGDMFEKEYVPNSGLCCKVIDVLCEDGKVEDACSMWRKLLKTNCTPDNAISSTLIYW 406
+ G++F++ ++P++ +++ CE G++ DA + + + P+ ++
Sbjct: 256 NKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEA 315
Query: 407 LCKEGKIWEARKLFNE-FEKGSIPSVITYNTLIEGMCERGELQEAGRLWDEMV------- 562
CKE K EAR L ++ E+ +PS +I+ +CE G+++EA LW M+
Sbjct: 316 YCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKNCMPD 375
Query: 563 ---------------------------ERGCVPSVFTYNVLIKGFCKAGKVSEGVKLLED 661
ERG +PS+ TYN LI G C+ G++SE KL +D
Sbjct: 376 NAIMSTLIHWLCKEGKVWEARKLFGEFERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDD 435
Query: 662 MMEKGSLPNKSTYFILAEG 718
MMEKG PN TY +L +G
Sbjct: 436 MMEKGYKPNAFTYNMLIKG 454
Score = 71.2 bits (173), Expect = 4e-10
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Frame = +2
Query: 11 EAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFGVMI 190
EA+K+F E +G IP TY L+ G ++G EA K+ DDM E G +PN T+ ++I
Sbjct: 394 EARKLFGEF-ERGAIPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLI 452
Query: 191 EGLCKEKKSGEALNLLGDMFEKEYVPNSGLCCKVIDVLCE---DGKVEDACSM 340
+G K + E + +L +M + +PN +I+ LC+ +G+V+ SM
Sbjct: 453 KGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKVVSM 505
Score = 63.2 bits (152), Expect = 1e-07
Identities = 28/74 (37%), Positives = 49/74 (66%)
Frame = +2
Query: 2 DLVEAKKVFDEILYKGWIPDATTYTVLMDGYLKQGRFIEAVKVMDDMEENGVEPNDITFG 181
+L EA K++D+++ KG+ P+A TY +L+ G+ K G E ++++++M +N PN T+
Sbjct: 425 ELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYA 484
Query: 182 VMIEGLCKEKKSGE 223
++IE LCK GE
Sbjct: 485 ILIEELCKMGMEGE 498