BLASTX nr result

ID: Coptis21_contig00014823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014823
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an...   148   4e-34
ref|XP_002317959.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-34
ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding...   146   2e-33
ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communi...   146   2e-33
gb|EEC84140.1| hypothetical protein OsI_30493 [Oryza sativa Indi...   146   2e-33

>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
           protein 1-like [Vitis vinifera]
          Length = 965

 Score =  148 bits (374), Expect = 4e-34
 Identities = 67/77 (87%), Positives = 73/77 (94%)
 Frame = -2

Query: 232 KMQEAFQPGSTPIQTGKRHFLCYNMLGSITTIENEGYSHIEVDFHDTGRGPRVPSMTDYF 53
           KMQEAFQPG+TP+Q GKR FLCYNMLGSITTIE++GYSHIE+DFHDTG GPRVP+MTDYF
Sbjct: 417 KMQEAFQPGATPVQPGKRRFLCYNMLGSITTIEHDGYSHIEIDFHDTGSGPRVPAMTDYF 476

Query: 52  GFTMASLNESGSVFANP 2
           GFTMASLNE GSVFANP
Sbjct: 477 GFTMASLNEHGSVFANP 493


>ref|XP_002317959.1| predicted protein [Populus trichocarpa] gi|222858632|gb|EEE96179.1|
           predicted protein [Populus trichocarpa]
          Length = 534

 Score =  147 bits (372), Expect = 7e-34
 Identities = 66/77 (85%), Positives = 73/77 (94%)
 Frame = -2

Query: 232 KMQEAFQPGSTPIQTGKRHFLCYNMLGSITTIENEGYSHIEVDFHDTGRGPRVPSMTDYF 53
           KMQEAFQPG+TP Q GKR FLCYNMLG+IT +EN+GYSHIE+DFHDTGRGPR+PSMTDYF
Sbjct: 300 KMQEAFQPGATPPQRGKRRFLCYNMLGTITAVENDGYSHIEIDFHDTGRGPRLPSMTDYF 359

Query: 52  GFTMASLNESGSVFANP 2
           GFTMASLNE+GSVFANP
Sbjct: 360 GFTMASLNENGSVFANP 376


>ref|XP_003522266.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Glycine max]
          Length = 994

 Score =  146 bits (368), Expect = 2e-33
 Identities = 66/77 (85%), Positives = 73/77 (94%)
 Frame = -2

Query: 232 KMQEAFQPGSTPIQTGKRHFLCYNMLGSITTIENEGYSHIEVDFHDTGRGPRVPSMTDYF 53
           KMQEAFQPGSTP+Q GKRHFLCYNMLG IT+IE++GYSHIE+DFHDTG  PRVPSMTD+F
Sbjct: 420 KMQEAFQPGSTPVQPGKRHFLCYNMLGCITSIEHDGYSHIEIDFHDTGSTPRVPSMTDHF 479

Query: 52  GFTMASLNESGSVFANP 2
           GFTMA+LNESGSVFANP
Sbjct: 480 GFTMAALNESGSVFANP 496


>ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543104|gb|EEF44638.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 775

 Score =  146 bits (368), Expect = 2e-33
 Identities = 65/77 (84%), Positives = 74/77 (96%)
 Frame = -2

Query: 232 KMQEAFQPGSTPIQTGKRHFLCYNMLGSITTIENEGYSHIEVDFHDTGRGPRVPSMTDYF 53
           K+QEAFQPG+TP Q GKR FLCYNMLG+ITT+E++GYSHIE+DFHDTGRGPRVPSMTDYF
Sbjct: 420 KLQEAFQPGATPAQPGKRRFLCYNMLGTITTMEHDGYSHIEIDFHDTGRGPRVPSMTDYF 479

Query: 52  GFTMASLNESGSVFANP 2
           GFT+ASLNE+GSVFANP
Sbjct: 480 GFTIASLNENGSVFANP 496


>gb|EEC84140.1| hypothetical protein OsI_30493 [Oryza sativa Indica Group]
          Length = 1019

 Score =  146 bits (368), Expect = 2e-33
 Identities = 68/77 (88%), Positives = 73/77 (94%)
 Frame = -2

Query: 232 KMQEAFQPGSTPIQTGKRHFLCYNMLGSITTIENEGYSHIEVDFHDTGRGPRVPSMTDYF 53
           +MQ AFQPGSTP Q GKR+FL YNMLGSITTIENEG+SH+EVDFHDTGRGPRVPSMTDYF
Sbjct: 436 RMQTAFQPGSTPPQPGKRNFLAYNMLGSITTIENEGHSHVEVDFHDTGRGPRVPSMTDYF 495

Query: 52  GFTMASLNESGSVFANP 2
           GFTMA+LNESGSVFANP
Sbjct: 496 GFTMAALNESGSVFANP 512


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