BLASTX nr result
ID: Coptis21_contig00014815
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00014815
(867 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268266.2| PREDICTED: putative disease resistance prote... 67 4e-10
emb|CAN78628.1| hypothetical protein VITISV_034887 [Vitis vinifera] 66 1e-09
ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trich... 63 8e-09
ref|XP_002332291.1| cc-nbs-lrr resistance protein [Populus trich... 62 2e-08
ref|XP_002269053.1| PREDICTED: putative disease resistance prote... 62 2e-08
>ref|XP_002268266.2| PREDICTED: putative disease resistance protein RGA4-like [Vitis
vinifera]
Length = 932
Score = 67.4 bits (163), Expect(2) = 4e-10
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 19/167 (11%)
Frame = +2
Query: 335 TTPFATVQVMFDDAEEKLVMSEAAKPWLEELKDVTYSVDGVLDECQTSIISSKRKGFDAD 514
T +V+ + +DAE + V ++ + WLE LKD+ Y +D VLDE T+I+ + +G + +
Sbjct: 39 TDTLRSVRDVLEDAERRQVKEKSVQGWLERLKDMAYQMDDVLDEWSTAILQLQMEGAE-N 97
Query: 515 ESFSGKKVLSYLLCHFPCFKTAVGHN------KETREGLDVNANEEPR--------QESN 652
S S KV S + CFK K+ ++ LDV A+E R QE
Sbjct: 98 ASMSKNKVSSCIPSPCFCFKQVASRRDIALKIKDLKQQLDVIASERTRFNFISSGTQEPQ 157
Query: 653 FVVEVSTVCTSDF---DEAVKSIL--LLGESIFLMMNVLIISVVGVG 778
++ S + S+ D V +IL LLGE+ + II++VG G
Sbjct: 158 RLITTSAIDVSEVYGRDTDVNAILGRLLGENDEEKSRLYIIAIVGTG 204
Score = 23.5 bits (49), Expect(2) = 4e-10
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 802 MGKTTLAQMFFNLVEL 849
MGKTTLAQ+ +N E+
Sbjct: 206 MGKTTLAQLAYNHPEV 221
>emb|CAN78628.1| hypothetical protein VITISV_034887 [Vitis vinifera]
Length = 541
Score = 65.9 bits (159), Expect(2) = 1e-09
Identities = 52/167 (31%), Positives = 82/167 (49%), Gaps = 19/167 (11%)
Frame = +2
Query: 335 TTPFATVQVMFDDAEEKLVMSEAAKPWLEELKDVTYSVDGVLDECQTSIISSKRKGFDAD 514
T +V+ + +DAE + V ++ + WLE LKD+ Y +D VLDE T+I+ + +G + +
Sbjct: 39 TDTLRSVRDVLEDAERRQVKEKSVQGWLERLKDMAYQMDDVLDEWSTAILQLQMEGAE-N 97
Query: 515 ESFSGKKVLSYLLCHFPCFKTAVGHN------KETREGLDVNANEEPR--------QESN 652
S S KV S + CFK K+ ++ LDV +E R QE
Sbjct: 98 ASMSTNKVSSCIPSPCFCFKQVASRRDIALKIKDLKQQLDVIGSERTRFNFISSGTQEPQ 157
Query: 653 FVVEVSTVCTSDF---DEAVKSIL--LLGESIFLMMNVLIISVVGVG 778
++ S + S+ D V +IL LLGE+ + II++VG G
Sbjct: 158 RLITTSAIDVSEVYGRDTDVNAILGRLLGENDEEKSRLYIIAIVGTG 204
Score = 23.5 bits (49), Expect(2) = 1e-09
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 802 MGKTTLAQMFFNLVEL 849
MGKTTLAQ+ +N E+
Sbjct: 206 MGKTTLAQLAYNHPEV 221
>ref|XP_002318909.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222859582|gb|EEE97129.1| cc-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 746
Score = 62.8 bits (151), Expect(2) = 8e-09
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 20/163 (12%)
Frame = +2
Query: 350 TVQVMFDDAEEKLVMSEAAKPWLEELKDVTYSVDGVLDECQTSIISSKRKGFDADESFSG 529
++Q + +DA+ K V EA K WL++LKDV Y +D VLDE T+I+ K + + +
Sbjct: 44 SIQSVLEDADRKQVKDEAVKGWLDKLKDVCYHMDDVLDEWSTAILRWKMEEAEENTRSRQ 103
Query: 530 KKVLSYLLCHFPCFKTAVGHN------KETREGLDVNANEE--------------PRQES 649
K S+L C V KE E +D A E R S
Sbjct: 104 KMRCSFLKSPCSCLNQVVRRRDIALKIKEVCEKVDDIAKERATYAFDPYRATDELQRLTS 163
Query: 650 NFVVEVSTVCTSDFDEAVKSILLLGESIFLMMNVLIISVVGVG 778
V+ S+V D ++ L+GES +V +IS+VG+G
Sbjct: 164 TSFVDESSVIGRDVEKTTVISKLVGESSQEARDVDVISLVGLG 206
Score = 23.5 bits (49), Expect(2) = 8e-09
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 802 MGKTTLAQMFFNLVEL 849
+GKTTLAQ+ FN E+
Sbjct: 208 IGKTTLAQLAFNDAEV 223
>ref|XP_002332291.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
gi|222832453|gb|EEE70930.1| cc-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 941
Score = 62.0 bits (149), Expect(2) = 2e-08
Identities = 54/165 (32%), Positives = 81/165 (49%), Gaps = 23/165 (13%)
Frame = +2
Query: 353 VQVMFDDAEEKLVMSEAAKPWLEELKDVTYSVDGVLDECQTSIISSKRKGFDADESFSGK 532
+Q + +DA+ K V +A + W+++LKDV Y +D VLDE T+I+ K + +A+E+ +
Sbjct: 41 IQSVLEDADRKQVKDKALRDWVDKLKDVCYDMDDVLDEWSTAILRWKME--EAEENTPSR 98
Query: 533 KVL--SYLLCHFPCFKTAVGHN------KETREGLDVNANEEPR---------------Q 643
K + S+L F C V KE E +D A E
Sbjct: 99 KKIRCSFLGSPFFCLNQVVQRRDIALKIKEVCEKVDDIAKERAMYGFELYRATDELQRIT 158
Query: 644 ESNFVVEVSTVCTSDFDEAVKSILLLGESIFLMMNVLIISVVGVG 778
++ V E S + D EAV S LLGESI +V +IS+VG+G
Sbjct: 159 STSLVDESSVIGRDDKREAVVS-KLLGESIQEAGDVEVISLVGMG 202
Score = 22.7 bits (47), Expect(2) = 2e-08
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 802 MGKTTLAQMFFN 837
+GKTTLAQ+ FN
Sbjct: 204 IGKTTLAQLAFN 215
>ref|XP_002269053.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
vinifera]
Length = 910
Score = 62.0 bits (149), Expect(2) = 2e-08
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 19/167 (11%)
Frame = +2
Query: 335 TTPFATVQVMFDDAEEKLVMSEAAKPWLEELKDVTYSVDGVLDECQTSIISSKRKGFDAD 514
T V+ + DAE++ V E K WLE LKD+ Y +D VLDE T+ + S+ + ++
Sbjct: 39 TNTLQIVRAVVADAEKRQVNEEPVKVWLERLKDIAYQMDDVLDEWSTAFLKSQIERVES- 97
Query: 515 ESFSGKKVLSYLLCHFPCFKTAVGHN------KETREGLDVNANEEPR--------QESN 652
S KKV S + CFK K ++ +D ANE + +E
Sbjct: 98 PSMPKKKVSSCIPSPCICFKRVARRRDIALKIKGIKQEVDDIANERNQFDFKSTNNEELQ 157
Query: 653 FVVEVSTVCTS-----DFDEAVKSILLLGESIFLMMNVLIISVVGVG 778
++ +S V T+ D DE + LLG S + + ISV G+G
Sbjct: 158 RIITISAVDTTEVYGRDRDEGIILRQLLGTSCEQSLGLYTISVFGMG 204
Score = 22.7 bits (47), Expect(2) = 2e-08
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1
Query: 802 MGKTTLAQMFFN 837
+GKTTLAQ+ FN
Sbjct: 206 IGKTTLAQLAFN 217