BLASTX nr result

ID: Coptis21_contig00014810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014810
         (608 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285620.1| PREDICTED: GDT1-like protein 2, chloroplasti...   349   2e-94
ref|XP_004157661.1| PREDICTED: GDT1-like protein 2, chloroplasti...   346   2e-93
ref|XP_004134019.1| PREDICTED: LOW QUALITY PROTEIN: GDT1-like pr...   346   2e-93
ref|XP_003535962.1| PREDICTED: GDT1-like protein 2, chloroplasti...   344   8e-93
ref|XP_002518164.1| Transmembrane protein TPARL, putative [Ricin...   343   1e-92

>ref|XP_002285620.1| PREDICTED: GDT1-like protein 2, chloroplastic [Vitis vinifera]
           gi|297741903|emb|CBI33338.3| unnamed protein product
           [Vitis vinifera]
          Length = 354

 Score =  349 bits (895), Expect = 2e-94
 Identities = 180/203 (88%), Positives = 191/203 (94%), Gaps = 1/203 (0%)
 Frame = +2

Query: 2   AIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLLGSMGALSLMTVLSVVIGRI 181
           AIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEK LVLLGSMGALSLMT+LSVVIGRI
Sbjct: 135 AIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKVLVLLGSMGALSLMTILSVVIGRI 194

Query: 182 FHSVPAQFQTTLPLGEYAAVTLLMFFGLKSLKDAWDLPMNVVKVDEKS-PELGEYVEAEE 358
           FHSVPAQFQTTLP+GEYAAVTLLMFFGLKS+KDAWDLP  VVK  +KS PEL E+VEAEE
Sbjct: 195 FHSVPAQFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSIVVKSGDKSGPELDEFVEAEE 254

Query: 359 LVKKKMAKRLTNPLEIIWKSFGLVFFAEWGDRSMLATIALGAAQSPWGVAGGAIAGHLIA 538
           LVK+K++KRLTNPLEI+WKSF LVFFAEWGDRSMLATIALGAAQSPWGVA GAIAGHL A
Sbjct: 255 LVKEKVSKRLTNPLEIVWKSFSLVFFAEWGDRSMLATIALGAAQSPWGVASGAIAGHLFA 314

Query: 539 TFVAILGGAFLAKYISEKLVGYI 607
           T +AILGGAFLA YISEKLVGY+
Sbjct: 315 TTIAILGGAFLANYISEKLVGYL 337


>ref|XP_004157661.1| PREDICTED: GDT1-like protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 370

 Score =  346 bits (887), Expect = 2e-93
 Identities = 175/203 (86%), Positives = 191/203 (94%), Gaps = 1/203 (0%)
 Frame = +2

Query: 2   AIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLLGSMGALSLMTVLSVVIGRI 181
           A+AKSGFTAAF+LIF+SEIGDKTFFIAALLAMQYEKGLVLLGSMGALSLMTVLSV+IGRI
Sbjct: 137 AVAKSGFTAAFSLIFISEIGDKTFFIAALLAMQYEKGLVLLGSMGALSLMTVLSVIIGRI 196

Query: 182 FHSVPAQFQTTLPLGEYAAVTLLMFFGLKSLKDAWDLPMNVVKV-DEKSPELGEYVEAEE 358
           FHSVPAQFQTTLP+GEYAAVTLL+FFGLK++KDAWDLP +V K  DE  PEL EYVEAEE
Sbjct: 197 FHSVPAQFQTTLPIGEYAAVTLLLFFGLKAIKDAWDLPSSVHKQGDESGPELDEYVEAEE 256

Query: 359 LVKKKMAKRLTNPLEIIWKSFGLVFFAEWGDRSMLATIALGAAQSPWGVAGGAIAGHLIA 538
           LVK+K++KRL+NPLEIIWKSF L+FFAEWGDRSMLATIALGAAQSPWGVA GAI GHLIA
Sbjct: 257 LVKEKVSKRLSNPLEIIWKSFSLIFFAEWGDRSMLATIALGAAQSPWGVATGAITGHLIA 316

Query: 539 TFVAILGGAFLAKYISEKLVGYI 607
           T +AILGGA LAKYISEKLVGY+
Sbjct: 317 TTIAILGGALLAKYISEKLVGYL 339


>ref|XP_004134019.1| PREDICTED: LOW QUALITY PROTEIN: GDT1-like protein 2,
           chloroplastic-like [Cucumis sativus]
          Length = 355

 Score =  346 bits (887), Expect = 2e-93
 Identities = 175/203 (86%), Positives = 191/203 (94%), Gaps = 1/203 (0%)
 Frame = +2

Query: 2   AIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLLGSMGALSLMTVLSVVIGRI 181
           A+AKSGFTAAF+LIF+SEIGDKTFFIAALLAMQYEKGLVLLGSMGALSLMTVLSV+IGRI
Sbjct: 136 AVAKSGFTAAFSLIFISEIGDKTFFIAALLAMQYEKGLVLLGSMGALSLMTVLSVIIGRI 195

Query: 182 FHSVPAQFQTTLPLGEYAAVTLLMFFGLKSLKDAWDLPMNVVKV-DEKSPELGEYVEAEE 358
           FHSVPAQFQTTLP+GEYAAVTLL+FFGLK++KDAWDLP +V K  DE  PEL EYVEAEE
Sbjct: 196 FHSVPAQFQTTLPIGEYAAVTLLLFFGLKAIKDAWDLPSSVHKQGDESGPELDEYVEAEE 255

Query: 359 LVKKKMAKRLTNPLEIIWKSFGLVFFAEWGDRSMLATIALGAAQSPWGVAGGAIAGHLIA 538
           LVK+K++KRL+NPLEIIWKSF L+FFAEWGDRSMLATIALGAAQSPWGVA GAI GHLIA
Sbjct: 256 LVKEKVSKRLSNPLEIIWKSFSLIFFAEWGDRSMLATIALGAAQSPWGVATGAITGHLIA 315

Query: 539 TFVAILGGAFLAKYISEKLVGYI 607
           T +AILGGA LAKYISEKLVGY+
Sbjct: 316 TTIAILGGALLAKYISEKLVGYL 338


>ref|XP_003535962.1| PREDICTED: GDT1-like protein 2, chloroplastic-like [Glycine max]
          Length = 354

 Score =  344 bits (882), Expect = 8e-93
 Identities = 173/202 (85%), Positives = 189/202 (93%)
 Frame = +2

Query: 2   AIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLLGSMGALSLMTVLSVVIGRI 181
           AIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLLGSMGAL+LM++LSVVIGRI
Sbjct: 136 AIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLLGSMGALALMSILSVVIGRI 195

Query: 182 FHSVPAQFQTTLPLGEYAAVTLLMFFGLKSLKDAWDLPMNVVKVDEKSPELGEYVEAEEL 361
           F SVPAQFQTTLP+GEYAAVTLL+FFGLK++KDAWDLP +VVK D  SPEL E  EAEEL
Sbjct: 196 FQSVPAQFQTTLPIGEYAAVTLLLFFGLKAIKDAWDLPSDVVKGDNSSPELDELAEAEEL 255

Query: 362 VKKKMAKRLTNPLEIIWKSFGLVFFAEWGDRSMLATIALGAAQSPWGVAGGAIAGHLIAT 541
           VK+K++ RL+NPLEI+WKSF LVFFAEWGDRSMLATIALGAAQSPWGVA GAIAGHL+AT
Sbjct: 256 VKEKVSTRLSNPLEIVWKSFSLVFFAEWGDRSMLATIALGAAQSPWGVASGAIAGHLLAT 315

Query: 542 FVAILGGAFLAKYISEKLVGYI 607
            +AILGGAFLA YISEKLVGY+
Sbjct: 316 TIAILGGAFLANYISEKLVGYL 337


>ref|XP_002518164.1| Transmembrane protein TPARL, putative [Ricinus communis]
           gi|223542760|gb|EEF44297.1| Transmembrane protein TPARL,
           putative [Ricinus communis]
          Length = 351

 Score =  343 bits (881), Expect = 1e-92
 Identities = 175/203 (86%), Positives = 190/203 (93%), Gaps = 1/203 (0%)
 Frame = +2

Query: 2   AIAKSGFTAAFTLIFVSEIGDKTFFIAALLAMQYEKGLVLLGSMGALSLMTVLSVVIGRI 181
           AI+KSG TAAFTLIFVSEIGDKTFFIAALLAMQY+KGLVLLGSMGALSLMT+LSV+IGRI
Sbjct: 132 AISKSGLTAAFTLIFVSEIGDKTFFIAALLAMQYKKGLVLLGSMGALSLMTILSVIIGRI 191

Query: 182 FHSVPAQFQTTLPLGEYAAVTLLMFFGLKSLKDAWDLPMNVVK-VDEKSPELGEYVEAEE 358
           FHSVPAQFQTTLP+GEYAAVTLLMFFGLKS+KDAWDLP + V+  D+ SPEL EY EAEE
Sbjct: 192 FHSVPAQFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSDEVRNGDKNSPELDEYAEAEE 251

Query: 359 LVKKKMAKRLTNPLEIIWKSFGLVFFAEWGDRSMLATIALGAAQSPWGVAGGAIAGHLIA 538
           LVK+K++K+LTNP EIIWKSF LVFFAEWGDRSMLATIALGAAQSPWGVA GAIAGHLIA
Sbjct: 252 LVKEKVSKKLTNPFEIIWKSFSLVFFAEWGDRSMLATIALGAAQSPWGVATGAIAGHLIA 311

Query: 539 TFVAILGGAFLAKYISEKLVGYI 607
           T +AILGGAFLA YISEKLVGY+
Sbjct: 312 TSIAILGGAFLANYISEKLVGYL 334


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