BLASTX nr result
ID: Coptis21_contig00014809
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014809 (786 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct... 219 7e-55 emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vu... 206 6e-51 ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat... 171 6e-45 emb|CBI23503.3| unnamed protein product [Vitis vinifera] 171 2e-40 ref|XP_002534810.1| NADH dehydrogenase, putative [Ricinus commun... 170 4e-40 >sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName: Full=NADH dehydrogenase subunit 2 gi|12822|emb|CAA34728.1| NADH:ubiquinone reductase subunit 2 [Beta vulgaris subsp. vulgaris] Length = 515 Score = 219 bits (557), Expect = 7e-55 Identities = 140/257 (54%), Positives = 151/257 (58%), Gaps = 5/257 (1%) Frame = -2 Query: 758 EGNTHFDRGGMIAGPSPRSARWPMGIAAFGLCLPFLIKNSGSARESAGNNRKEXXXXXXX 579 +G FDRGGMI GPSPRSARWP+GIAAFGLCL FLIKNSGSARESAGNNRKE Sbjct: 42 KGTRFFDRGGMIFGPSPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAA 101 Query: 578 XXXXXXXXXS----TTKERIHFR*PRL-CQAACGMAESGPFWIYNPSREWSYGNSRLMEN 414 + TTKERIHF+ AACGMA S F G + LMEN Sbjct: 102 SAPFLVNRAAGSATTTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMEN 161 Query: 413 NXXXXXXXXXXXXXFLVPFRVNSPAAN*QLVGPIYSISRAPKKTPSPSDSISLLTLYMWA 234 N L RVNS A GP S +P KTP P YMWA Sbjct: 162 NFHGSVQRALFSLRILRSLRVNSLARIQNFWGPSIP-SSSPAKTPLPFGLNIFFDSYMWA 220 Query: 233 PDIYEGSPTPVTAFLSIAPKISIFANMLRVFIYGSYGATLQQIFFFCSIASMILGALAAM 54 PDIYEGSPTPVTAF SIAP+ SI AN+LRVFIYGSYGATLQQIFFFCSIA + L + AM Sbjct: 221 PDIYEGSPTPVTAFFSIAPERSISANILRVFIYGSYGATLQQIFFFCSIA-LRLRSTGAM 279 Query: 53 AQTKVKRLLAYSSIGHV 3 A A SSIG + Sbjct: 280 ANEG----KASSSIGQL 292 >emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vulgaris] Length = 464 Score = 206 bits (523), Expect = 6e-51 Identities = 134/247 (54%), Positives = 144/247 (58%), Gaps = 5/247 (2%) Frame = -2 Query: 728 MIAGPSPRSARWPMGIAAFGLCLPFLIKNSGSARESAGNNRKEXXXXXXXXXXXXXXXXS 549 MI GPSPRSARWP+GIAAFGLCL FLIKNSGSARESAGNNRKE + Sbjct: 1 MIFGPSPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAA 60 Query: 548 ----TTKERIHFR*PRL-CQAACGMAESGPFWIYNPSREWSYGNSRLMENNXXXXXXXXX 384 TTKERIHF+ AACGMA S F G + LMENN Sbjct: 61 GSATTTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMENNFHGSVQRAL 120 Query: 383 XXXXFLVPFRVNSPAAN*QLVGPIYSISRAPKKTPSPSDSISLLTLYMWAPDIYEGSPTP 204 L RVNS A GP S +P KTP P YMWAPDIYEGSPTP Sbjct: 121 FSLRILRSLRVNSLARIQNFWGPSIP-SSSPAKTPLPFGLNIFFDSYMWAPDIYEGSPTP 179 Query: 203 VTAFLSIAPKISIFANMLRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLA 24 VTAF SIAP+ SI AN+LRVFIYGSYGATLQQIFFFCSIA + L + AMA A Sbjct: 180 VTAFFSIAPERSISANILRVFIYGSYGATLQQIFFFCSIA-LRLRSTGAMANEG----KA 234 Query: 23 YSSIGHV 3 SSIG + Sbjct: 235 SSSIGQL 241 >ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula] gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit [Medicago truncatula] Length = 1094 Score = 171 bits (433), Expect(2) = 6e-45 Identities = 88/95 (92%), Positives = 90/95 (94%) Frame = -2 Query: 287 KTPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANMLRVFIYGSYGATLQQ 108 K PSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFAN+ RV IYGSYGATLQQ Sbjct: 500 KPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQ 559 Query: 107 IFFFCSIASMILGALAAMAQTKVKRLLAYSSIGHV 3 IF FCSIASMILGALAAMAQTKVKR LA+SSIGHV Sbjct: 560 IFCFCSIASMILGALAAMAQTKVKRPLAHSSIGHV 594 Score = 36.2 bits (82), Expect(2) = 6e-45 Identities = 15/23 (65%), Positives = 16/23 (69%) Frame = -3 Query: 346 PQRRINNLWALSIPSLEPRRKPP 278 P N WALSIPSL+PR KPP Sbjct: 480 PSGEFNTFWALSIPSLKPRIKPP 502 Score = 57.4 bits (137), Expect = 3e-06 Identities = 30/45 (66%), Positives = 32/45 (71%) Frame = -2 Query: 785 EDGLRCVLSEGNTHFDRGGMIAGPSPRSARWPMGIAAFGLCLPFL 651 EDGLRCVLSEGNT F GPSPRSAR P+GIAAF C +L Sbjct: 390 EDGLRCVLSEGNTLFRPRWYDLGPSPRSARRPLGIAAFVACPLYL 434 >emb|CBI23503.3| unnamed protein product [Vitis vinifera] Length = 526 Score = 171 bits (432), Expect = 2e-40 Identities = 90/109 (82%), Positives = 95/109 (87%) Frame = -2 Query: 329 QLVGPIYSISRAPKKTPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANML 150 Q+ P+ R +K PSPSDSISLLTLYMWAPDIYEGSPTPVTAFL IAPKISI AN+ Sbjct: 236 QITTPLLGSPR--RKAPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLFIAPKISISANIS 293 Query: 149 RVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAYSSIGHV 3 RV IYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKR LA+SSIGHV Sbjct: 294 RVSIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRPLAHSSIGHV 342 Score = 115 bits (289), Expect = 8e-24 Identities = 56/63 (88%), Positives = 56/63 (88%), Gaps = 4/63 (6%) Frame = -1 Query: 675 LRALPALSNKEFRLGPGKRWQQQKGRGPCSCCARPL----SSRFGIYYKRENPLQITTPL 508 LRALPAL NKEFRLGPGKRWQQQKGRGPCSCCARPL SRFGIYYKRENPLQITTPL Sbjct: 182 LRALPALYNKEFRLGPGKRWQQQKGRGPCSCCARPLLSQWGSRFGIYYKRENPLQITTPL 241 Query: 507 PGS 499 GS Sbjct: 242 LGS 244 >ref|XP_002534810.1| NADH dehydrogenase, putative [Ricinus communis] gi|223524538|gb|EEF27573.1| NADH dehydrogenase, putative [Ricinus communis] Length = 214 Score = 170 bits (430), Expect = 4e-40 Identities = 87/95 (91%), Positives = 90/95 (94%) Frame = -2 Query: 287 KTPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANMLRVFIYGSYGATLQQ 108 K PSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISI AN+ RV IYGSYGATLQQ Sbjct: 1 KPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVSIYGSYGATLQQ 60 Query: 107 IFFFCSIASMILGALAAMAQTKVKRLLAYSSIGHV 3 IFFFCSIASMILG+LAAMAQTKVKR LA+SSIGHV Sbjct: 61 IFFFCSIASMILGSLAAMAQTKVKRPLAHSSIGHV 95