BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014809
         (786 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct...   219   7e-55
emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vu...   206   6e-51
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat...   171   6e-45
emb|CBI23503.3| unnamed protein product [Vitis vinifera]              171   2e-40
ref|XP_002534810.1| NADH dehydrogenase, putative [Ricinus commun...   170   4e-40

>sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
           Full=NADH dehydrogenase subunit 2
           gi|12822|emb|CAA34728.1| NADH:ubiquinone reductase
           subunit 2 [Beta vulgaris subsp. vulgaris]
          Length = 515

 Score =  219 bits (557), Expect = 7e-55
 Identities = 140/257 (54%), Positives = 151/257 (58%), Gaps = 5/257 (1%)
 Frame = -2

Query: 758 EGNTHFDRGGMIAGPSPRSARWPMGIAAFGLCLPFLIKNSGSARESAGNNRKEXXXXXXX 579
           +G   FDRGGMI GPSPRSARWP+GIAAFGLCL FLIKNSGSARESAGNNRKE       
Sbjct: 42  KGTRFFDRGGMIFGPSPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAA 101

Query: 578 XXXXXXXXXS----TTKERIHFR*PRL-CQAACGMAESGPFWIYNPSREWSYGNSRLMEN 414
                    +    TTKERIHF+       AACGMA S  F           G + LMEN
Sbjct: 102 SAPFLVNRAAGSATTTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMEN 161

Query: 413 NXXXXXXXXXXXXXFLVPFRVNSPAAN*QLVGPIYSISRAPKKTPSPSDSISLLTLYMWA 234
           N              L   RVNS A      GP    S +P KTP P         YMWA
Sbjct: 162 NFHGSVQRALFSLRILRSLRVNSLARIQNFWGPSIP-SSSPAKTPLPFGLNIFFDSYMWA 220

Query: 233 PDIYEGSPTPVTAFLSIAPKISIFANMLRVFIYGSYGATLQQIFFFCSIASMILGALAAM 54
           PDIYEGSPTPVTAF SIAP+ SI AN+LRVFIYGSYGATLQQIFFFCSIA + L +  AM
Sbjct: 221 PDIYEGSPTPVTAFFSIAPERSISANILRVFIYGSYGATLQQIFFFCSIA-LRLRSTGAM 279

Query: 53  AQTKVKRLLAYSSIGHV 3
           A        A SSIG +
Sbjct: 280 ANEG----KASSSIGQL 292


>emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
          Length = 464

 Score =  206 bits (523), Expect = 6e-51
 Identities = 134/247 (54%), Positives = 144/247 (58%), Gaps = 5/247 (2%)
 Frame = -2

Query: 728 MIAGPSPRSARWPMGIAAFGLCLPFLIKNSGSARESAGNNRKEXXXXXXXXXXXXXXXXS 549
           MI GPSPRSARWP+GIAAFGLCL FLIKNSGSARESAGNNRKE                +
Sbjct: 1   MIFGPSPRSARWPIGIAAFGLCLLFLIKNSGSARESAGNNRKEGVHVAAASAPFLVNRAA 60

Query: 548 ----TTKERIHFR*PRL-CQAACGMAESGPFWIYNPSREWSYGNSRLMENNXXXXXXXXX 384
               TTKERIHF+       AACGMA S  F           G + LMENN         
Sbjct: 61  GSATTTKERIHFKITNASAMAACGMAGSDLFGYIIQVESGVTGTAGLMENNFHGSVQRAL 120

Query: 383 XXXXFLVPFRVNSPAAN*QLVGPIYSISRAPKKTPSPSDSISLLTLYMWAPDIYEGSPTP 204
                L   RVNS A      GP    S +P KTP P         YMWAPDIYEGSPTP
Sbjct: 121 FSLRILRSLRVNSLARIQNFWGPSIP-SSSPAKTPLPFGLNIFFDSYMWAPDIYEGSPTP 179

Query: 203 VTAFLSIAPKISIFANMLRVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLA 24
           VTAF SIAP+ SI AN+LRVFIYGSYGATLQQIFFFCSIA + L +  AMA        A
Sbjct: 180 VTAFFSIAPERSISANILRVFIYGSYGATLQQIFFFCSIA-LRLRSTGAMANEG----KA 234

Query: 23  YSSIGHV 3
            SSIG +
Sbjct: 235 SSSIGQL 241


>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
           gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
           [Medicago truncatula]
          Length = 1094

 Score =  171 bits (433), Expect(2) = 6e-45
 Identities = 88/95 (92%), Positives = 90/95 (94%)
 Frame = -2

Query: 287 KTPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANMLRVFIYGSYGATLQQ 108
           K PSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFAN+ RV IYGSYGATLQQ
Sbjct: 500 KPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANISRVSIYGSYGATLQQ 559

Query: 107 IFFFCSIASMILGALAAMAQTKVKRLLAYSSIGHV 3
           IF FCSIASMILGALAAMAQTKVKR LA+SSIGHV
Sbjct: 560 IFCFCSIASMILGALAAMAQTKVKRPLAHSSIGHV 594



 Score = 36.2 bits (82), Expect(2) = 6e-45
 Identities = 15/23 (65%), Positives = 16/23 (69%)
 Frame = -3

Query: 346 PQRRINNLWALSIPSLEPRRKPP 278
           P    N  WALSIPSL+PR KPP
Sbjct: 480 PSGEFNTFWALSIPSLKPRIKPP 502



 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 30/45 (66%), Positives = 32/45 (71%)
 Frame = -2

Query: 785 EDGLRCVLSEGNTHFDRGGMIAGPSPRSARWPMGIAAFGLCLPFL 651
           EDGLRCVLSEGNT F       GPSPRSAR P+GIAAF  C  +L
Sbjct: 390 EDGLRCVLSEGNTLFRPRWYDLGPSPRSARRPLGIAAFVACPLYL 434


>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  171 bits (432), Expect = 2e-40
 Identities = 90/109 (82%), Positives = 95/109 (87%)
 Frame = -2

Query: 329 QLVGPIYSISRAPKKTPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANML 150
           Q+  P+    R  +K PSPSDSISLLTLYMWAPDIYEGSPTPVTAFL IAPKISI AN+ 
Sbjct: 236 QITTPLLGSPR--RKAPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLFIAPKISISANIS 293

Query: 149 RVFIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRLLAYSSIGHV 3
           RV IYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKR LA+SSIGHV
Sbjct: 294 RVSIYGSYGATLQQIFFFCSIASMILGALAAMAQTKVKRPLAHSSIGHV 342



 Score =  115 bits (289), Expect = 8e-24
 Identities = 56/63 (88%), Positives = 56/63 (88%), Gaps = 4/63 (6%)
 Frame = -1

Query: 675 LRALPALSNKEFRLGPGKRWQQQKGRGPCSCCARPL----SSRFGIYYKRENPLQITTPL 508
           LRALPAL NKEFRLGPGKRWQQQKGRGPCSCCARPL     SRFGIYYKRENPLQITTPL
Sbjct: 182 LRALPALYNKEFRLGPGKRWQQQKGRGPCSCCARPLLSQWGSRFGIYYKRENPLQITTPL 241

Query: 507 PGS 499
            GS
Sbjct: 242 LGS 244


>ref|XP_002534810.1| NADH dehydrogenase, putative [Ricinus communis]
           gi|223524538|gb|EEF27573.1| NADH dehydrogenase, putative
           [Ricinus communis]
          Length = 214

 Score =  170 bits (430), Expect = 4e-40
 Identities = 87/95 (91%), Positives = 90/95 (94%)
 Frame = -2

Query: 287 KTPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISIFANMLRVFIYGSYGATLQQ 108
           K PSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISI AN+ RV IYGSYGATLQQ
Sbjct: 1   KPPSPSDSISLLTLYMWAPDIYEGSPTPVTAFLSIAPKISISANISRVSIYGSYGATLQQ 60

Query: 107 IFFFCSIASMILGALAAMAQTKVKRLLAYSSIGHV 3
           IFFFCSIASMILG+LAAMAQTKVKR LA+SSIGHV
Sbjct: 61  IFFFCSIASMILGSLAAMAQTKVKRPLAHSSIGHV 95