BLASTX nr result

ID: Coptis21_contig00014793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014793
         (1184 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274167.1| PREDICTED: uncharacterized protein LOC100245...   274   3e-71
emb|CCA29110.1| putative MYB transcription factor [Rosa hybrid c...   273   8e-71
ref|NP_001235894.1| MYB transcription factor MYB109 [Glycine max...   272   1e-70
ref|XP_002511974.1| DNA binding protein, putative [Ricinus commu...   270   7e-70
emb|CBI15416.3| unnamed protein product [Vitis vinifera]              260   5e-67

>ref|XP_002274167.1| PREDICTED: uncharacterized protein LOC100245771 [Vitis vinifera]
          Length = 296

 Score =  274 bits (701), Expect = 3e-71
 Identities = 147/265 (55%), Positives = 168/265 (63%), Gaps = 13/265 (4%)
 Frame = -3

Query: 1038 WTREEDKAFENAIAAHWLEDSKDKWEKIATSVPRKTVAEVKRHYDILVEDLKAIEAGHVP 859
            W+REE+KAFENAIA HW ED K+ W+KIA+ VP K+V E+K+HY  LVED+ AIEAGH+P
Sbjct: 8    WSREEEKAFENAIAMHWTEDCKEVWDKIASMVPGKSVDELKQHYQFLVEDVNAIEAGHIP 67

Query: 858  VPNYVGDETTT---KEHQ------EDSKMNYNYANGFYXXXXXXXXXXXXXXXXSEQERR 706
            +PNY  DE ++   K+H        D + N  +  GF                 SEQERR
Sbjct: 68   LPNYAADEASSSSVKDHHALPSATSDKRSNCGFGGGFSGLGHDSAVQGGKGGSRSEQERR 127

Query: 705  KGIPWTEEEHRXXXXXXXXXXXXDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRR 526
            KGIPWTEEEHR            DWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRR
Sbjct: 128  KGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRR 187

Query: 525  RSSIHDITSINGTDVSSPQGPI---XXXXXXXXXXXXXXXXXXVKHRPMPPNMAG-VGMY 358
            RSSIHDITS+N  DVS+PQ PI                       HR  P   AG +GMY
Sbjct: 188  RSSIHDITSVNNGDVSTPQAPITGQQGNGNPASAAAAGVGPPLKHHRAQPSMPAGALGMY 247

Query: 357  GAPMGQPISGPGAHMVSAVGTPVML 283
            G PMG P++ P  HM SAVGTPVML
Sbjct: 248  GTPMGHPVAAPPGHMASAVGTPVML 272


>emb|CCA29110.1| putative MYB transcription factor [Rosa hybrid cultivar]
          Length = 302

 Score =  273 bits (697), Expect = 8e-71
 Identities = 150/269 (55%), Positives = 175/269 (65%), Gaps = 17/269 (6%)
 Frame = -3

Query: 1038 WTREEDKAFENAIAAHWLEDSKDK-WEKIATSVPRKTVAEVKRHYDILVEDLKAIEAGHV 862
            WTREEDK FENAIA HW+ED ++  W+KIA+ VP K++ E+KRHY +LVED+ AI +G++
Sbjct: 4    WTREEDKTFENAIALHWIEDDEESSWDKIASLVPSKSMEELKRHYQMLVEDVSAIVSGNI 63

Query: 861  PVPNYVGDETTTKEHQE------------DSKMNYNYANG--FYXXXXXXXXXXXXXXXX 724
            PVPNY G+E TT   +E            D +++  + NG  F                 
Sbjct: 64   PVPNYGGEEATTSVSKESSSARASSSGVSDKRLSSGHGNGGGFSALGHDSSGHGSKGGSR 123

Query: 723  SEQERRKGIPWTEEEHRXXXXXXXXXXXXDWRSISRNFVISRTPTQVASHAQKYFIRLNS 544
            S+QER+KGIPWTEEEHR            DWRSISRNFVISRTPTQVASHAQKYFIRLNS
Sbjct: 124  SDQERKKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNS 183

Query: 543  MNRDRRRSSIHDITSI-NGTDVSSPQGPI-XXXXXXXXXXXXXXXXXXVKHRPMPPNMAG 370
            MNRDRRRSSIHDITS+ NG DV S Q PI                   VKHRP  P+MAG
Sbjct: 184  MNRDRRRSSIHDITSVNNGGDVPSHQAPITGQQSNAYAPSAAAIGPPSVKHRPHQPHMAG 243

Query: 369  VGMYGAPMGQPISGPGAHMVSAVGTPVML 283
            +GMYGAPMG P+S P  HM SAVGTPVML
Sbjct: 244  LGMYGAPMGHPVSAPPGHMASAVGTPVML 272


>ref|NP_001235894.1| MYB transcription factor MYB109 [Glycine max]
            gi|356511607|ref|XP_003524515.1| PREDICTED:
            uncharacterized protein LOC100812196 [Glycine max]
            gi|110931704|gb|ABH02851.1| MYB transcription factor
            MYB109 [Glycine max]
          Length = 307

 Score =  272 bits (695), Expect = 1e-70
 Identities = 148/272 (54%), Positives = 173/272 (63%), Gaps = 14/272 (5%)
 Frame = -3

Query: 1056 MSDDGQ-WTREEDKAFENAIAAHWLEDS-KDKWEKIATSVPRKTVAEVKRHYDILVEDLK 883
            MS  G  W+ +E+KAFENAIA HW+E+S K++WEKIA++VP K++ EVK+HY +LVED+ 
Sbjct: 1    MSSSGTIWSYDEEKAFENAIAMHWIEESSKEQWEKIASAVPSKSMEEVKQHYQVLVEDVS 60

Query: 882  AIEAGHVPVPNYVGDETTT---------KEHQEDSKMNYNYANGFYXXXXXXXXXXXXXX 730
            AIEAGH+  PNY  DETT+         K    D + N NY +GF               
Sbjct: 61   AIEAGHISFPNYASDETTSSNKDFHGSSKATSSDKRSNCNYGSGFSGLGLDSTTHSSGKG 120

Query: 729  XXS---EQERRKGIPWTEEEHRXXXXXXXXXXXXDWRSISRNFVISRTPTQVASHAQKYF 559
              S   EQERRKGIPWTEEEHR            DWRSISRNFVISRTPTQVASHAQKYF
Sbjct: 121  GLSRSSEQERRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYF 180

Query: 558  IRLNSMNRDRRRSSIHDITSINGTDVSSPQGPIXXXXXXXXXXXXXXXXXXVKHRPMPPN 379
            IRLNSMNRDRRRSSIHDITS+N  DV+S Q PI                  +KHR     
Sbjct: 181  IRLNSMNRDRRRSSIHDITSVNNGDVASSQAPITGLHSSTISSNTMGVGQSLKHRVQGHI 240

Query: 378  MAGVGMYGAPMGQPISGPGAHMVSAVGTPVML 283
              G+GMYG P+G P++ P  HM SAVGTPVML
Sbjct: 241  PPGLGMYGTPVGHPVAAPPGHMASAVGTPVML 272


>ref|XP_002511974.1| DNA binding protein, putative [Ricinus communis]
            gi|223549154|gb|EEF50643.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 297

 Score =  270 bits (689), Expect = 7e-70
 Identities = 139/263 (52%), Positives = 171/263 (65%), Gaps = 11/263 (4%)
 Frame = -3

Query: 1038 WTREEDKAFENAIAAHWLED-SKDKWEKIATSVPRKTVAEVKRHYDILVEDLKAIEAGHV 862
            W+REED AFENAIA HW+ED S+++WEKIA+ VP + + E+K+HY +LVED+ AIEAG+V
Sbjct: 8    WSREEDIAFENAIATHWIEDDSEEQWEKIASMVPSRNIEELKQHYRLLVEDVDAIEAGNV 67

Query: 861  PVPNYVGDETTTKEHQE----------DSKMNYNYANGFYXXXXXXXXXXXXXXXXSEQE 712
            P+PNYVG+ETT+   ++          D ++N  + +GF                 ++QE
Sbjct: 68   PLPNYVGEETTSSSSKDSHGFSGAVTTDKRLNCGFGSGFMGLGPNSSGHGGKGGSRADQE 127

Query: 711  RRKGIPWTEEEHRXXXXXXXXXXXXDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRD 532
            RRKGIPWTEEEHR            DWRSISRNFV+SRTPTQVASHAQKYFIRLNSMNRD
Sbjct: 128  RRKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVLSRTPTQVASHAQKYFIRLNSMNRD 187

Query: 531  RRRSSIHDITSINGTDVSSPQGPIXXXXXXXXXXXXXXXXXXVKHRPMPPNMAGVGMYGA 352
            RRRSSIHDITS+N  +VSS Q PI                          +M  +GMYGA
Sbjct: 188  RRRSSIHDITSVNNGEVSSHQAPITGQQGNTNPAAGAPAMGSAVKHRAQHHMPSIGMYGA 247

Query: 351  PMGQPISGPGAHMVSAVGTPVML 283
            P+G P++ P  HM SAVGTPVML
Sbjct: 248  PVGHPVAAPPGHMASAVGTPVML 270


>emb|CBI15416.3| unnamed protein product [Vitis vinifera]
          Length = 252

 Score =  260 bits (664), Expect = 5e-67
 Identities = 140/256 (54%), Positives = 158/256 (61%), Gaps = 4/256 (1%)
 Frame = -3

Query: 1038 WTREEDKAFENAIAAHWLEDSKDKWEKIATSVPRKTVAEVKRHYDILVEDLKAIEAGHVP 859
            W+REE+KAFENAIA HW ED K+ W+KIA+ VP K+V E+K+HY  LVED+ AIEAGH+P
Sbjct: 8    WSREEEKAFENAIAMHWTEDCKEVWDKIASMVPGKSVDELKQHYQFLVEDVNAIEAGHIP 67

Query: 858  VPNYVGDETTTKEHQEDSKMNYNYANGFYXXXXXXXXXXXXXXXXSEQERRKGIPWTEEE 679
            +PNY  DE ++                                   EQERRKGIPWTEEE
Sbjct: 68   LPNYAADEASS-----------------------------------EQERRKGIPWTEEE 92

Query: 678  HRXXXXXXXXXXXXDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITS 499
            HR            DWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITS
Sbjct: 93   HRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMNRDRRRSSIHDITS 152

Query: 498  INGTDVSSPQGPI---XXXXXXXXXXXXXXXXXXVKHRPMPPNMAG-VGMYGAPMGQPIS 331
            +N  DVS+PQ PI                       HR  P   AG +GMYG PMG P++
Sbjct: 153  VNNGDVSTPQAPITGQQGNGNPASAAAAGVGPPLKHHRAQPSMPAGALGMYGTPMGHPVA 212

Query: 330  GPGAHMVSAVGTPVML 283
             P  HM SAVGTPVML
Sbjct: 213  APPGHMASAVGTPVML 228


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