BLASTX nr result

ID: Coptis21_contig00014788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014788
         (951 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26414.3| unnamed protein product [Vitis vinifera]              491   e-136
ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Viti...   491   e-136
emb|CAN81193.1| hypothetical protein VITISV_022848 [Vitis vinifera]   475   e-132
ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricin...   471   e-130
ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like ...   469   e-130

>emb|CBI26414.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  491 bits (1263), Expect = e-136
 Identities = 249/317 (78%), Positives = 272/317 (85%)
 Frame = +1

Query: 1    GLGGMHLVLFRVEGNHRLPPTTLSPGDMVCVRTCDSRGAGATSSMQGFINNLGEDGCSII 180
            GLGGMHLVLF+VEGNHRLPPTTLSPGDMVCVR CDSRGAGATS MQGF+++LG+DGCSI 
Sbjct: 162  GLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRICDSRGAGATSCMQGFVDSLGKDGCSIS 221

Query: 181  VALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERNCEALMLLQKSGLQKRNPSIAIVA 360
            VALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERNCEALMLLQK+GLQK+NPSIA+VA
Sbjct: 222  VALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERNCEALMLLQKNGLQKKNPSIAVVA 281

Query: 361  TLFGEKEDVECLEQNHLVDWTETELDGALQDGVYDSSQLKAIAFGLNKKRPILIVQGPPG 540
            TLFG+KEDV  LE+N LVDW E  LD  L+ G YD SQ +AIA GLNKKRPILI+QGPPG
Sbjct: 282  TLFGDKEDVAWLEENDLVDWAEVGLDELLESGAYDDSQRRAIALGLNKKRPILIIQGPPG 341

Query: 541  TGKTGLLKELIALAVQQGERVLVTAPTNAAIDNMVEKLSNIGLNMLRVGNPARISTSVAS 720
            TGKT LLKELIALAVQQGERVLVTAPTNAA+DNMVEKLSNIG+N++RVGNPARIS++VAS
Sbjct: 342  TGKTVLLKELIALAVQQGERVLVTAPTNAAVDNMVEKLSNIGVNIVRVGNPARISSAVAS 401

Query: 721  KSLGEIVKSKLSTFVKEFERKKSDLRKDLRYCLRDDSLPAGIRXXXXXXXXXXXXXXXXX 900
            KSLGEIV SKL  F+ EFERKKSDLRKDLR+CL+DDSL AGIR                 
Sbjct: 402  KSLGEIVNSKLENFLTEFERKKSDLRKDLRHCLKDDSLAAGIRQLLKQLGKALKKKEKET 461

Query: 901  XXXXXSNAQVVLCTNTG 951
                 S+AQVVL TNTG
Sbjct: 462  VKEVLSSAQVVLATNTG 478


>ref|XP_002264216.1| PREDICTED: DNA-binding protein SMUBP-2 [Vitis vinifera]
          Length = 953

 Score =  491 bits (1263), Expect = e-136
 Identities = 249/317 (78%), Positives = 272/317 (85%)
 Frame = +1

Query: 1    GLGGMHLVLFRVEGNHRLPPTTLSPGDMVCVRTCDSRGAGATSSMQGFINNLGEDGCSII 180
            GLGGMHLVLF+VEGNHRLPPTTLSPGDMVCVR CDSRGAGATS MQGF+++LG+DGCSI 
Sbjct: 326  GLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRICDSRGAGATSCMQGFVDSLGKDGCSIS 385

Query: 181  VALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERNCEALMLLQKSGLQKRNPSIAIVA 360
            VALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERNCEALMLLQK+GLQK+NPSIA+VA
Sbjct: 386  VALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERNCEALMLLQKNGLQKKNPSIAVVA 445

Query: 361  TLFGEKEDVECLEQNHLVDWTETELDGALQDGVYDSSQLKAIAFGLNKKRPILIVQGPPG 540
            TLFG+KEDV  LE+N LVDW E  LD  L+ G YD SQ +AIA GLNKKRPILI+QGPPG
Sbjct: 446  TLFGDKEDVAWLEENDLVDWAEVGLDELLESGAYDDSQRRAIALGLNKKRPILIIQGPPG 505

Query: 541  TGKTGLLKELIALAVQQGERVLVTAPTNAAIDNMVEKLSNIGLNMLRVGNPARISTSVAS 720
            TGKT LLKELIALAVQQGERVLVTAPTNAA+DNMVEKLSNIG+N++RVGNPARIS++VAS
Sbjct: 506  TGKTVLLKELIALAVQQGERVLVTAPTNAAVDNMVEKLSNIGVNIVRVGNPARISSAVAS 565

Query: 721  KSLGEIVKSKLSTFVKEFERKKSDLRKDLRYCLRDDSLPAGIRXXXXXXXXXXXXXXXXX 900
            KSLGEIV SKL  F+ EFERKKSDLRKDLR+CL+DDSL AGIR                 
Sbjct: 566  KSLGEIVNSKLENFLTEFERKKSDLRKDLRHCLKDDSLAAGIRQLLKQLGKALKKKEKET 625

Query: 901  XXXXXSNAQVVLCTNTG 951
                 S+AQVVL TNTG
Sbjct: 626  VKEVLSSAQVVLATNTG 642


>emb|CAN81193.1| hypothetical protein VITISV_022848 [Vitis vinifera]
          Length = 806

 Score =  475 bits (1222), Expect = e-132
 Identities = 249/347 (71%), Positives = 272/347 (78%), Gaps = 30/347 (8%)
 Frame = +1

Query: 1    GLGGMHLVLFRVEGNHRLPPTTLSPGDMVCVRTCDSRGAGATSSMQGFINNLGEDGCSII 180
            GLGGMHLVLF+VEGNHRLPPTTLSPGDMVCVR CDSRGAGATS MQGF+++LG+DGCSI 
Sbjct: 337  GLGGMHLVLFKVEGNHRLPPTTLSPGDMVCVRICDSRGAGATSCMQGFVDSLGKDGCSIS 396

Query: 181  VALESRHGDPTFSKLFGKSVRIDRIHGLADALTYE------------------------- 285
            VALESRHGDPTFSKLFGKSVRIDRIHGLADALTYE                         
Sbjct: 397  VALESRHGDPTFSKLFGKSVRIDRIHGLADALTYEISTFSGLLPYKRQKYRITSSLFRGM 456

Query: 286  -----RNCEALMLLQKSGLQKRNPSIAIVATLFGEKEDVECLEQNHLVDWTETELDGALQ 450
                 RNCEALMLLQK+GLQK+NPSIA+VATLFG+KEDV  LE+N LVDW E  LD  L+
Sbjct: 457  DMLRQRNCEALMLLQKNGLQKKNPSIAVVATLFGDKEDVAWLEENDLVDWAEVGLDELLE 516

Query: 451  DGVYDSSQLKAIAFGLNKKRPILIVQGPPGTGKTGLLKELIALAVQQGERVLVTAPTNAA 630
             G YD SQ +AIA GLNKKRPILI+QGPPGTGKT LLKELIALAVQQGERVLVTAPTNAA
Sbjct: 517  SGAYDDSQRRAIALGLNKKRPILIIQGPPGTGKTVLLKELIALAVQQGERVLVTAPTNAA 576

Query: 631  IDNMVEKLSNIGLNMLRVGNPARISTSVASKSLGEIVKSKLSTFVKEFERKKSDLRKDLR 810
            +DNMVEKLSNIG+N++RVGNPARIS++VASKSLGEIV SKL  F+ EFERKKSDLRKDLR
Sbjct: 577  VDNMVEKLSNIGVNIVRVGNPARISSAVASKSLGEIVNSKLENFLTEFERKKSDLRKDLR 636

Query: 811  YCLRDDSLPAGIRXXXXXXXXXXXXXXXXXXXXXXSNAQVVLCTNTG 951
            +CL+DDSL AGIR                      S+AQVVL TNTG
Sbjct: 637  HCLKDDSLAAGIRQLLKQLGKALKKKEKETVKEVLSSAQVVLATNTG 683


>ref|XP_002524012.1| DNA-binding protein smubp-2, putative [Ricinus communis]
            gi|223536739|gb|EEF38380.1| DNA-binding protein smubp-2,
            putative [Ricinus communis]
          Length = 989

 Score =  471 bits (1211), Expect = e-130
 Identities = 238/317 (75%), Positives = 263/317 (82%)
 Frame = +1

Query: 1    GLGGMHLVLFRVEGNHRLPPTTLSPGDMVCVRTCDSRGAGATSSMQGFINNLGEDGCSII 180
            GLGGMHLVLFRVEGNHRLPPT LSPGDMVCVR CDSRGAGATS MQGF+NNLGEDGCSI 
Sbjct: 362  GLGGMHLVLFRVEGNHRLPPTNLSPGDMVCVRICDSRGAGATSCMQGFVNNLGEDGCSIS 421

Query: 181  VALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERNCEALMLLQKSGLQKRNPSIAIVA 360
            VALESRHGDPTFSKLFGK VRIDRIHGLADALTYERNCEALMLLQK+GLQK+NPSIAIVA
Sbjct: 422  VALESRHGDPTFSKLFGKGVRIDRIHGLADALTYERNCEALMLLQKNGLQKKNPSIAIVA 481

Query: 361  TLFGEKEDVECLEQNHLVDWTETELDGALQDGVYDSSQLKAIAFGLNKKRPILIVQGPPG 540
            TLFG+ ED+  LE+  L +W E ++DG      +D SQ +A+A GLN+KRP+LI+QGPPG
Sbjct: 482  TLFGDSEDLAWLEEKDLAEWNEADMDGCFGSERFDDSQRRAMALGLNQKRPLLIIQGPPG 541

Query: 541  TGKTGLLKELIALAVQQGERVLVTAPTNAAIDNMVEKLSNIGLNMLRVGNPARISTSVAS 720
            TGK+GLLKELI  AV QGERVLVTAPTNAA+DNMVEKLSNIGL+++RVGNPARIS++VAS
Sbjct: 542  TGKSGLLKELIVRAVHQGERVLVTAPTNAAVDNMVEKLSNIGLDIVRVGNPARISSAVAS 601

Query: 721  KSLGEIVKSKLSTFVKEFERKKSDLRKDLRYCLRDDSLPAGIRXXXXXXXXXXXXXXXXX 900
            KSL EIV SKL+TF  EFERKKSDLRKDLR+CL DDSL AGIR                 
Sbjct: 602  KSLSEIVNSKLATFRMEFERKKSDLRKDLRHCLEDDSLAAGIRQLLKQLGKTMKKKEKES 661

Query: 901  XXXXXSNAQVVLCTNTG 951
                 S+AQVVL TNTG
Sbjct: 662  VKEVLSSAQVVLATNTG 678


>ref|XP_004143639.1| PREDICTED: DNA-binding protein SMUBP-2-like [Cucumis sativus]
            gi|449527761|ref|XP_004170878.1| PREDICTED: DNA-binding
            protein SMUBP-2-like [Cucumis sativus]
          Length = 957

 Score =  469 bits (1208), Expect = e-130
 Identities = 238/317 (75%), Positives = 267/317 (84%)
 Frame = +1

Query: 1    GLGGMHLVLFRVEGNHRLPPTTLSPGDMVCVRTCDSRGAGATSSMQGFINNLGEDGCSII 180
            GLGGMHLVLFRVEG+HRLPPTTLSPGDMVCVR CDSRGAGATS MQGF+NNLG+DGCSI 
Sbjct: 330  GLGGMHLVLFRVEGSHRLPPTTLSPGDMVCVRVCDSRGAGATSCMQGFVNNLGDDGCSIT 389

Query: 181  VALESRHGDPTFSKLFGKSVRIDRIHGLADALTYERNCEALMLLQKSGLQKRNPSIAIVA 360
            VALESRHGDPTFSKLFGK+VRIDRI GLAD LTYERNCEALMLLQK+GL K+NPSIA+VA
Sbjct: 390  VALESRHGDPTFSKLFGKTVRIDRIPGLADTLTYERNCEALMLLQKNGLHKKNPSIAVVA 449

Query: 361  TLFGEKEDVECLEQNHLVDWTETELDGALQDGVYDSSQLKAIAFGLNKKRPILIVQGPPG 540
            TLFG+KED++ +E N+L+   +T LDG + +G +D SQ  AI+  LNKKRPILI+QGPPG
Sbjct: 450  TLFGDKEDIKWMEDNNLIGLADTNLDGIVFNGDFDDSQKSAISRALNKKRPILIIQGPPG 509

Query: 541  TGKTGLLKELIALAVQQGERVLVTAPTNAAIDNMVEKLSNIGLNMLRVGNPARISTSVAS 720
            TGKTGLLKELIALAVQQGERVLVTAPTNAA+DNMVEKLSNIG+N++RVGNPARIS+SVAS
Sbjct: 510  TGKTGLLKELIALAVQQGERVLVTAPTNAAVDNMVEKLSNIGINIVRVGNPARISSSVAS 569

Query: 721  KSLGEIVKSKLSTFVKEFERKKSDLRKDLRYCLRDDSLPAGIRXXXXXXXXXXXXXXXXX 900
            KSL EIV S+LS+F  + ERKK+DLRKDLR CL+DDSL AGIR                 
Sbjct: 570  KSLAEIVNSELSSFRTDIERKKADLRKDLRQCLKDDSLAAGIRQLLKQLGKSLKKKEKET 629

Query: 901  XXXXXSNAQVVLCTNTG 951
                 SNAQVVL TNTG
Sbjct: 630  VKEVLSNAQVVLATNTG 646


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