BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014763
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...    58   1e-11
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co...    53   1e-09
emb|CAN65206.1| hypothetical protein VITISV_016718 [Vitis vinifera]    50   3e-09
ref|XP_002319052.1| predicted protein [Populus trichocarpa] gi|2...    49   4e-08
emb|CBI34215.3| unnamed protein product [Vitis vinifera]               39   8e-06

>ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 950

 Score = 58.2 bits (139), Expect(2) = 1e-11
 Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 6/153 (3%)
 Frame = +2

Query: 65   KKGYGQDQNYFHGNFSNPRGTIVNSRSAPSYNEMWKXXXXXXXXXXXXXXXXHLQT---- 232
            +KG+  D NY++G++ NPRG +   R  PS N M                  +  +    
Sbjct: 792  EKGFNGDSNYYYGHYDNPRGALSIPRFPPSPNNMQGNRQNFRVQDRSTFQDQYRNSRTGI 851

Query: 233  -GKSSLTIKDGPK-YQHSVAPLRKPNTLFSPSPQQMPVQYVGQSPRPPIDWIDKPTYENP 406
             G S+LTI++G +  Q  V P R P+   + +     VQ     P PP  WI++      
Sbjct: 852  MGMSTLTIEEGVRTRQPIVRPSRMPSAADTLNTNNQFVQN-KSPPAPPSKWIER------ 904

Query: 407  GMYVIHQDIYENTGMYVRQPEVLSSNVYEKQVK 505
                       N GM VRQ + +S+  YEK +K
Sbjct: 905  -------QATGNAGMIVRQQDNVSAGTYEKPIK 930



 Score = 35.8 bits (81), Expect(2) = 1e-11
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +1

Query: 7   HVPNNHTVDRPRPAGLSGYEK 69
           ++P+N+ V+RPRPAG SGYEK
Sbjct: 773 NMPSNYVVNRPRPAGPSGYEK 793


>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 964

 Score = 53.1 bits (126), Expect(2) = 1e-09
 Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
 Frame = +2

Query: 65   KKGYGQDQNYFHGNFSNPRGTIVNSRSAPSYNEMWKXXXXXXXXXXXXXXXXH--LQTGK 238
            ++GY  D NY++G+ +  +G + N RS    N +                  +  L+TG 
Sbjct: 804  ERGYSNDPNYYYGHHNYQQGLMSNPRSPLFSNGVSSNRHNFRTQDRVQYHEQYRDLKTGM 863

Query: 239  SSLTIKDGPKYQH-SVAPLRKPNTLFSPSPQQMPVQYVGQSPRPPIDWIDKPTYENPGMY 415
            S+LT+++  K +  +V   R  NT +S S QQ   Q +G  P PP  WI K T  +  MY
Sbjct: 864  SALTMEENVKSRPPAVMSQRTQNTGYSSSLQQQFEQNLGALPSPPAKWIGKATDTDAEMY 923



 Score = 33.9 bits (76), Expect(2) = 1e-09
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +1

Query: 7   HVPNNHTVDRPRPAGLSGYEK 69
           ++P N T +RPRPAG SGYE+
Sbjct: 785 NIPGNSTFNRPRPAGPSGYER 805


>emb|CAN65206.1| hypothetical protein VITISV_016718 [Vitis vinifera]
          Length = 389

 Score = 50.4 bits (119), Expect(2) = 3e-09
 Identities = 45/178 (25%), Positives = 66/178 (37%), Gaps = 31/178 (17%)
 Frame = +2

Query: 65  KKGYGQDQNYFHGNFSNPRGTIVNSRSAPSYNEM-------------------------- 166
           +KG+  D NY++G++ NPRG +   R  PS N M                          
Sbjct: 206 EKGFNGDSNYYYGHYDNPRGALSIPRFPPSPNNMQGNRQNFRVQDRSTFQDQYRNSRTGM 265

Query: 167 ----WKXXXXXXXXXXXXXXXXHLQTGKSSLTIKDGPK-YQHSVAPLRKPNTLFSPSPQQ 331
                +                 L  G S+LTI++G +  Q  V P R P+   + +   
Sbjct: 266 SALTTEQNFRVQHRPPYQDQFSELSMGMSTLTIEEGVRTRQPIVRPSRMPSAADTLNTNN 325

Query: 332 MPVQYVGQSPRPPIDWIDKPTYENPGMYVIHQDIYENTGMYVRQPEVLSSNVYEKQVK 505
             VQ     P PP  WI++                 N GM VRQ + +S+  YEK +K
Sbjct: 326 QFVQN-KSPPAPPSKWIER-------------QATGNAGMIVRQQDNVSAGTYEKPIK 369



 Score = 35.8 bits (81), Expect(2) = 3e-09
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +1

Query: 7   HVPNNHTVDRPRPAGLSGYEK 69
           ++P+N+ V+RPRPAG SGYEK
Sbjct: 187 NMPSNYVVNRPRPAGPSGYEK 207


>ref|XP_002319052.1| predicted protein [Populus trichocarpa] gi|222857428|gb|EEE94975.1|
            predicted protein [Populus trichocarpa]
          Length = 965

 Score = 48.5 bits (114), Expect(2) = 4e-08
 Identities = 34/119 (28%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
 Frame = +2

Query: 68   KGYGQDQNYFHGNFSNPRGTIVNSRSAPSYNEMW--KXXXXXXXXXXXXXXXXHLQTGKS 241
            +GY  D NY +   SN +G + N R     N +   +                +L TG S
Sbjct: 804  RGYWDDPNYHYAQHSNQQGLMSNPRYRSLSNGVQSNRHNFRTQDGVQYHQQYHNLSTGVS 863

Query: 242  SLTIKDGPKYQH-SVAPLRKPNTLFSPSPQQMPVQYVGQSPRPPIDWIDKPTYENPGMY 415
            +LT+++  + +  +V   R PN   +P+ Q    Q  G    PP +WI+K    N GMY
Sbjct: 864  ALTVEENIRSRAPAVISPRMPNPGNTPNLQNQAEQNTGLLSSPPTNWINKTAAGNTGMY 922



 Score = 33.5 bits (75), Expect(2) = 4e-08
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 4   YHVPNNHTVDRPRPAGLSGYEKRIW 78
           +++P N+T  RPRPAG +GY +  W
Sbjct: 783 HNIPGNYTFYRPRPAGPAGYGRGYW 807


>emb|CBI34215.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score = 38.5 bits (88), Expect(2) = 8e-06
 Identities = 15/34 (44%), Positives = 22/34 (64%)
 Frame = +2

Query: 65   KKGYGQDQNYFHGNFSNPRGTIVNSRSAPSYNEM 166
            +KG+  D NY++G++ NPRG +   R  PS N M
Sbjct: 1034 EKGFNGDSNYYYGHYDNPRGALSIPRFPPSPNNM 1067



 Score = 35.8 bits (81), Expect(2) = 8e-06
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +1

Query: 7    HVPNNHTVDRPRPAGLSGYEK 69
            ++P+N+ V+RPRPAG SGYEK
Sbjct: 1015 NMPSNYVVNRPRPAGPSGYEK 1035