BLASTX nr result

ID: Coptis21_contig00014761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014761
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317351.1| multidrug resistance protein ABC transporter...   159   2e-37
ref|XP_002281070.1| PREDICTED: ABC transporter C family member 2...   157   6e-37
ref|XP_002448550.1| hypothetical protein SORBIDRAFT_06g028880 [S...   152   4e-35
ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2...   151   5e-35
ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2...   151   5e-35

>ref|XP_002317351.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222860416|gb|EEE97963.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1617

 Score =  159 bits (402), Expect = 2e-37
 Identities = 66/93 (70%), Positives = 82/93 (88%)
 Frame = +1

Query: 1   YVPSVEPYSGYTPIRDEFIDDAEYEVLPAGEQICPERHANILSRIYFGWMTPLMRQGYKR 180
           YVP ++PY GYTP++ E +DDAEYE LP GE ICPERHANI+S+I FGWM+PLM+ GY+R
Sbjct: 187 YVPDLDPYPGYTPMQIESVDDAEYEELPGGEYICPERHANIISKIVFGWMSPLMKLGYRR 246

Query: 181 PITERDVWKLDTWDQTETLNNKFQRCWVDESRK 279
           PITE+DVWKLDTWD+TETLN++FQ+CW +E RK
Sbjct: 247 PITEKDVWKLDTWDRTETLNDRFQKCWAEELRK 279


>ref|XP_002281070.1| PREDICTED: ABC transporter C family member 2-like [Vitis vinifera]
          Length = 1624

 Score =  157 bits (398), Expect = 6e-37
 Identities = 61/93 (65%), Positives = 85/93 (91%)
 Frame = +1

Query: 1   YVPSVEPYSGYTPIRDEFIDDAEYEVLPAGEQICPERHANILSRIYFGWMTPLMRQGYKR 180
           +VP++ PY GYTP++ + +++ +YEVLP G+QICPE+HAN+ SRIYFGWMTPLM+QGYK+
Sbjct: 194 HVPNLNPYVGYTPMQSDSLENTKYEVLPGGDQICPEKHANMFSRIYFGWMTPLMQQGYKK 253

Query: 181 PITERDVWKLDTWDQTETLNNKFQRCWVDESRK 279
           PITE+D+WKLDTWDQTETL+ +FQ+CW++ES++
Sbjct: 254 PITEKDIWKLDTWDQTETLSRRFQKCWIEESQR 286


>ref|XP_002448550.1| hypothetical protein SORBIDRAFT_06g028880 [Sorghum bicolor]
           gi|241939733|gb|EES12878.1| hypothetical protein
           SORBIDRAFT_06g028880 [Sorghum bicolor]
          Length = 1627

 Score =  152 bits (383), Expect = 4e-35
 Identities = 62/94 (65%), Positives = 82/94 (87%), Gaps = 1/94 (1%)
 Frame = +1

Query: 1   YVPSVEPYSGYTPIRDE-FIDDAEYEVLPAGEQICPERHANILSRIYFGWMTPLMRQGYK 177
           Y+PSV+PY GYTPIR+E  +D+ +YE LP GEQICPERH N+ +RI+F WMTPLM+QG++
Sbjct: 195 YLPSVDPYPGYTPIRNEVLVDNTDYEPLPGGEQICPERHVNVFARIFFSWMTPLMQQGFR 254

Query: 178 RPITERDVWKLDTWDQTETLNNKFQRCWVDESRK 279
           RPIT++D+WKLD+WD+TETL ++FQ+CW DE RK
Sbjct: 255 RPITDKDIWKLDSWDETETLYSQFQKCWNDELRK 288


>ref|XP_003633036.1| PREDICTED: ABC transporter C family member 2 isoform 2 [Vitis
           vinifera]
          Length = 1616

 Score =  151 bits (382), Expect = 5e-35
 Identities = 64/91 (70%), Positives = 75/91 (82%)
 Frame = +1

Query: 1   YVPSVEPYSGYTPIRDEFIDDAEYEVLPAGEQICPERHANILSRIYFGWMTPLMRQGYKR 180
           YVP ++PY GYTP+    +DDAEYE +P GEQICPERH NI SRI FGWM P+M+ G KR
Sbjct: 187 YVPDLDPYPGYTPMWTGSVDDAEYEEIPGGEQICPERHVNIFSRITFGWMNPIMQLGSKR 246

Query: 181 PITERDVWKLDTWDQTETLNNKFQRCWVDES 273
           PITE+DVWKLD+WDQTETLNN FQRCW +E+
Sbjct: 247 PITEKDVWKLDSWDQTETLNNNFQRCWAEEA 277


>ref|XP_002280819.1| PREDICTED: ABC transporter C family member 2 isoform 1 [Vitis
           vinifera] gi|297740795|emb|CBI30977.3| unnamed protein
           product [Vitis vinifera]
          Length = 1623

 Score =  151 bits (382), Expect = 5e-35
 Identities = 64/91 (70%), Positives = 75/91 (82%)
 Frame = +1

Query: 1   YVPSVEPYSGYTPIRDEFIDDAEYEVLPAGEQICPERHANILSRIYFGWMTPLMRQGYKR 180
           YVP ++PY GYTP+    +DDAEYE +P GEQICPERH NI SRI FGWM P+M+ G KR
Sbjct: 194 YVPDLDPYPGYTPMWTGSVDDAEYEEIPGGEQICPERHVNIFSRITFGWMNPIMQLGSKR 253

Query: 181 PITERDVWKLDTWDQTETLNNKFQRCWVDES 273
           PITE+DVWKLD+WDQTETLNN FQRCW +E+
Sbjct: 254 PITEKDVWKLDSWDQTETLNNNFQRCWAEEA 284


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