BLASTX nr result
ID: Coptis21_contig00014757
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014757 (480 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putativ... 149 1e-35 ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 150 4e-35 emb|CBI15398.3| unnamed protein product [Vitis vinifera] 150 4e-35 ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|2... 146 3e-34 ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 139 1e-32 >ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 590 Score = 149 bits (376), Expect(2) = 1e-35 Identities = 68/73 (93%), Positives = 71/73 (97%) Frame = -1 Query: 480 HSELLKYIQVDCSDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAAHGLDIPAVDWIVQY 301 HSELL+YIQV+C DIHGKQKQQKRT+TFFDFCKAEKGILLCTDVAA GLDIPAVDWIVQY Sbjct: 366 HSELLRYIQVECFDIHGKQKQQKRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQY 425 Query: 300 DPPDEPKEYIHRV 262 DPPDEPKEYIHRV Sbjct: 426 DPPDEPKEYIHRV 438 Score = 25.8 bits (55), Expect(2) = 1e-35 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = -3 Query: 256 TAHGEGGKGHAXXXXXXXXXXXLSYLKVA 170 TA GEGGKG+A L YLK A Sbjct: 441 TARGEGGKGNALLFLIPEELQFLRYLKAA 469 >ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 1 [Vitis vinifera] Length = 580 Score = 150 bits (379), Expect(2) = 4e-35 Identities = 70/83 (84%), Positives = 74/83 (89%) Frame = -1 Query: 480 HSELLKYIQVDCSDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAAHGLDIPAVDWIVQY 301 HSELL+YIQVDC DIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAA GLDIP VDWIVQY Sbjct: 354 HSELLRYIQVDCLDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPDVDWIVQY 413 Query: 300 DPPDEPKEYIHRVDQQLMEKAEK 232 DPPDEPKEYIHRV + + +K Sbjct: 414 DPPDEPKEYIHRVGRTARGEGKK 436 Score = 22.7 bits (47), Expect(2) = 4e-35 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = -3 Query: 256 TAHGEGGKGHAXXXXXXXXXXXLSYLKVA 170 TA GEG KG+A L YLK A Sbjct: 429 TARGEGKKGNALLFLIPEELQFLRYLKAA 457 >emb|CBI15398.3| unnamed protein product [Vitis vinifera] Length = 492 Score = 150 bits (379), Expect(2) = 4e-35 Identities = 70/83 (84%), Positives = 74/83 (89%) Frame = -1 Query: 480 HSELLKYIQVDCSDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAAHGLDIPAVDWIVQY 301 HSELL+YIQVDC DIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAA GLDIP VDWIVQY Sbjct: 266 HSELLRYIQVDCLDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPDVDWIVQY 325 Query: 300 DPPDEPKEYIHRVDQQLMEKAEK 232 DPPDEPKEYIHRV + + +K Sbjct: 326 DPPDEPKEYIHRVGRTARGEGKK 348 Score = 22.7 bits (47), Expect(2) = 4e-35 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = -3 Query: 256 TAHGEGGKGHAXXXXXXXXXXXLSYLKVA 170 TA GEG KG+A L YLK A Sbjct: 341 TARGEGKKGNALLFLIPEELQFLRYLKAA 369 >ref|XP_002298317.1| predicted protein [Populus trichocarpa] gi|222845575|gb|EEE83122.1| predicted protein [Populus trichocarpa] Length = 574 Score = 146 bits (369), Expect(2) = 3e-34 Identities = 66/73 (90%), Positives = 71/73 (97%) Frame = -1 Query: 480 HSELLKYIQVDCSDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAAHGLDIPAVDWIVQY 301 H++LL+YIQV+C DIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAA GLDIPAVDWIVQ+ Sbjct: 350 HADLLRYIQVECFDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQF 409 Query: 300 DPPDEPKEYIHRV 262 DPPDEPKEYIHRV Sbjct: 410 DPPDEPKEYIHRV 422 Score = 23.5 bits (49), Expect(2) = 3e-34 Identities = 13/29 (44%), Positives = 14/29 (48%) Frame = -3 Query: 256 TAHGEGGKGHAXXXXXXXXXXXLSYLKVA 170 TA GEG KG+A L YLK A Sbjct: 425 TARGEGAKGNALLFLIPEELQFLRYLKAA 453 >ref|XP_003549814.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 27-like [Glycine max] Length = 575 Score = 139 bits (349), Expect(2) = 1e-32 Identities = 62/73 (84%), Positives = 68/73 (93%) Frame = -1 Query: 480 HSELLKYIQVDCSDIHGKQKQQKRTSTFFDFCKAEKGILLCTDVAAHGLDIPAVDWIVQY 301 H+++L IQ++CS IHGKQKQQ RT+TFFDFCKAEKGILLCTDVAA GLDIPAVDWIVQY Sbjct: 352 HADILNLIQLNCSSIHGKQKQQSRTTTFFDFCKAEKGILLCTDVAARGLDIPAVDWIVQY 411 Query: 300 DPPDEPKEYIHRV 262 DPPDEPKEYIHRV Sbjct: 412 DPPDEPKEYIHRV 424 Score = 25.8 bits (55), Expect(2) = 1e-32 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = -3 Query: 256 TAHGEGGKGHAXXXXXXXXXXXLSYLKVA 170 TA GEGGKG+A L YLK A Sbjct: 427 TARGEGGKGNALLFLIPEELQFLRYLKAA 455