BLASTX nr result
ID: Coptis21_contig00014756
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014756 (267 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002321703.1| predicted protein [Populus trichocarpa] gi|2... 140 8e-32 ref|XP_004158283.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma... 135 3e-30 ref|XP_004144239.1| PREDICTED: 50S ribosomal protein L21, mitoch... 135 3e-30 ref|XP_002519068.1| 50S ribosomal protein L21, mitochondrial pre... 135 3e-30 gb|ADN33989.1| 50S ribosomal protein l21 mitochondrial precursor... 135 5e-30 >ref|XP_002321703.1| predicted protein [Populus trichocarpa] gi|222868699|gb|EEF05830.1| predicted protein [Populus trichocarpa] Length = 381 Score = 140 bits (354), Expect = 8e-32 Identities = 68/88 (77%), Positives = 79/88 (89%) Frame = +3 Query: 3 YSLEEMKEEAAAIGYKVIGPLDPTERPFKYREPFFAVIQIGSHQFKVSNGDTIYTEKLKF 182 YS EE++ EAAAIGYKVIGPL P++R K+REP FAV+QIGSHQFKVSNGD IY E+LKF Sbjct: 109 YSAEEIEAEAAAIGYKVIGPLLPSDRVLKHREPVFAVVQIGSHQFKVSNGDCIYVERLKF 168 Query: 183 CEVNDKLILDKVLMVGSKSQTIIGRPIL 266 CEVNDKLIL+KVLM+G+ +QTIIGRPIL Sbjct: 169 CEVNDKLILNKVLMLGTSTQTIIGRPIL 196 >ref|XP_004158283.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L21, mitochondrial-like [Cucumis sativus] Length = 270 Score = 135 bits (340), Expect = 3e-30 Identities = 65/86 (75%), Positives = 77/86 (89%) Frame = +3 Query: 3 YSLEEMKEEAAAIGYKVIGPLDPTERPFKYREPFFAVIQIGSHQFKVSNGDTIYTEKLKF 182 Y+ EEM+ EAAAIGYKV+GPLD +E FK EP FAV+QIGSHQFKVSNGD+I+TE+LKF Sbjct: 109 YTKEEMEAEAAAIGYKVLGPLDQSEGVFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKF 168 Query: 183 CEVNDKLILDKVLMVGSKSQTIIGRP 260 C+VNDKLIL+KVL+VGS SQTI+GRP Sbjct: 169 CDVNDKLILNKVLLVGSSSQTIVGRP 194 >ref|XP_004144239.1| PREDICTED: 50S ribosomal protein L21, mitochondrial-like [Cucumis sativus] Length = 270 Score = 135 bits (340), Expect = 3e-30 Identities = 65/86 (75%), Positives = 77/86 (89%) Frame = +3 Query: 3 YSLEEMKEEAAAIGYKVIGPLDPTERPFKYREPFFAVIQIGSHQFKVSNGDTIYTEKLKF 182 Y+ EEM+ EAAAIGYKV+GPLD +E FK EP FAV+QIGSHQFKVSNGD+I+TE+LKF Sbjct: 109 YTKEEMEAEAAAIGYKVLGPLDQSEGVFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKF 168 Query: 183 CEVNDKLILDKVLMVGSKSQTIIGRP 260 C+VNDKLIL+KVL+VGS SQTI+GRP Sbjct: 169 CDVNDKLILNKVLLVGSSSQTIVGRP 194 >ref|XP_002519068.1| 50S ribosomal protein L21, mitochondrial precursor, putative [Ricinus communis] gi|223541731|gb|EEF43279.1| 50S ribosomal protein L21, mitochondrial precursor, putative [Ricinus communis] Length = 268 Score = 135 bits (340), Expect = 3e-30 Identities = 65/88 (73%), Positives = 79/88 (89%) Frame = +3 Query: 3 YSLEEMKEEAAAIGYKVIGPLDPTERPFKYREPFFAVIQIGSHQFKVSNGDTIYTEKLKF 182 Y+L+E +EEAAAIGYKVIGPL +ER K EP FAVIQIGSHQFKVSNGD I+TE+LKF Sbjct: 105 YTLQEKEEEAAAIGYKVIGPLGDSERVIKAYEPVFAVIQIGSHQFKVSNGDCIFTERLKF 164 Query: 183 CEVNDKLILDKVLMVGSKSQTIIGRPIL 266 C+VNDKLIL+KVL+VGS++QTI+GRP++ Sbjct: 165 CDVNDKLILNKVLLVGSQTQTIVGRPMV 192 >gb|ADN33989.1| 50S ribosomal protein l21 mitochondrial precursor [Cucumis melo subsp. melo] Length = 279 Score = 135 bits (339), Expect = 5e-30 Identities = 65/86 (75%), Positives = 77/86 (89%) Frame = +3 Query: 3 YSLEEMKEEAAAIGYKVIGPLDPTERPFKYREPFFAVIQIGSHQFKVSNGDTIYTEKLKF 182 Y+ EEM+ EAAAIGYKV+GPLD +E FK EP FAV+QIGSHQFKVSNGD+I+TE+LKF Sbjct: 118 YTKEEMEAEAAAIGYKVLGPLDQSEGIFKPYEPAFAVVQIGSHQFKVSNGDSIFTERLKF 177 Query: 183 CEVNDKLILDKVLMVGSKSQTIIGRP 260 C+VNDKLIL+KVL+VGS SQTI+GRP Sbjct: 178 CDVNDKLILNKVLLVGSSSQTIVGRP 203