BLASTX nr result

ID: Coptis21_contig00014751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014751
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38242.1| unknown [Medicago truncatula]                           68   1e-09
ref|XP_002512191.1| conserved hypothetical protein [Ricinus comm...    68   1e-09
ref|XP_002297653.1| predicted protein [Populus trichocarpa] gi|2...    68   1e-09
ref|XP_002271097.1| PREDICTED: uncharacterized protein LOC100266...    67   3e-09
ref|XP_002313466.1| predicted protein [Populus trichocarpa] gi|2...    67   3e-09

>gb|AFK38242.1| unknown [Medicago truncatula]
          Length = 81

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 40/77 (51%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
 Frame = +3

Query: 324 SDLGDMLVKVGMFLLVQALVYFILSSSSNVFG-NKMRSVSFKTVXXXXXXXXXXXXXDLP 500
           S LGDML+KV MF+LVQALVY ILS+SSN+F  N  RS SFK               D P
Sbjct: 3   SSLGDMLLKVAMFVLVQALVYLILSNSSNIFSKNIKRSNSFKPARSVSIRRMLAYLSDFP 62

Query: 501 LGGEPSPSSRASQEFST 551
             GEPSPS+ + Q  +T
Sbjct: 63  PEGEPSPSTMSPQSQAT 79


>ref|XP_002512191.1| conserved hypothetical protein [Ricinus communis]
           gi|223548735|gb|EEF50225.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 88

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 41/85 (48%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
 Frame = +3

Query: 312 MVFGSDLGDMLVKVGMFLLVQALVYFILSSSSNVFGNKM-RSVSFKTVXXXXXXXXXXXX 488
           M+  S LGDML+KV MF LVQALVY ILS SSN+F N + RS SFK              
Sbjct: 2   MIMESSLGDMLLKVAMFALVQALVYIILSKSSNIFSNTVKRSSSFKPARSVSIRRFLAAL 61

Query: 489 XDLPLGGE--PSPSSRASQEFSTDE 557
            DLP  GE  PSP + AS + ++ +
Sbjct: 62  QDLPASGELSPSPKNPASTQDTSQQ 86


>ref|XP_002297653.1| predicted protein [Populus trichocarpa] gi|222844911|gb|EEE82458.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 39/79 (49%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
 Frame = +3

Query: 324 SDLGDMLVKVGMFLLVQALVYFILSSSSNVFG-NKMRSVSFKTVXXXXXXXXXXXXXDLP 500
           + L ++L+KV MF+LVQ LVY ILS+SSN+F  NK RS SFK               D+P
Sbjct: 5   ASLAEILIKVAMFVLVQVLVYAILSNSSNIFSKNKTRSFSFKPARSLSIRGFLDAISDMP 64

Query: 501 LG-GEPSPSSRASQEFSTD 554
           LG  EPSP SR S+ F+ D
Sbjct: 65  LGSSEPSPLSRGSRSFTQD 83


>ref|XP_002271097.1| PREDICTED: uncharacterized protein LOC100266637 [Vitis vinifera]
          Length = 95

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 41/79 (51%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
 Frame = +3

Query: 312 MVFGSDLGDMLVKVGMFLLVQALVYFILSSSSNVFG-NKMRSVSFKTVXXXXXXXXXXXX 488
           M F S L DM++KVGMF+LVQALVY ILS SSN+F  N  RS  FK              
Sbjct: 1   MAFESSLADMVLKVGMFVLVQALVYLILSKSSNIFSKNPKRSHRFKPARSVSIRRVLACL 60

Query: 489 XDLPLGGE--PSPSSRASQ 539
            DLP GGE  PSPS +  Q
Sbjct: 61  ADLPPGGELSPSPSPKGPQ 79


>ref|XP_002313466.1| predicted protein [Populus trichocarpa] gi|222849874|gb|EEE87421.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 43/88 (48%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
 Frame = +3

Query: 324 SDLGDMLVKVGMFLLVQALVYFILSSSSNVFG--NKMRSVSFKTVXXXXXXXXXXXXXDL 497
           S LGD+L+KV MF++VQ LVY ILS SSN+F   N  RS SFKT              DL
Sbjct: 3   SSLGDVLLKVAMFVIVQGLVYLILSKSSNIFSKTNDKRSSSFKTARSVSIRRILAVLQDL 62

Query: 498 PLGGEPSPSSRASQEFS--TDEKLVGRR 575
           P GGE SP+S  S +    T EK   RR
Sbjct: 63  PPGGELSPASSKSTQVQSPTVEKSEDRR 90


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