BLASTX nr result
ID: Coptis21_contig00014745
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014745 (903 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-... 163 6e-38 ref|XP_003601903.1| RING-H2 finger protein [Medicago truncatula]... 162 1e-37 ref|XP_003551995.1| PREDICTED: E3 ubiquitin-protein ligase RNF18... 154 2e-35 ref|XP_002314594.1| predicted protein [Populus trichocarpa] gi|2... 154 4e-35 gb|AEG64816.1| RING-H2 type zinc finger [Avicennia marina] 147 3e-33 >ref|XP_003631250.1| PREDICTED: E3 ubiquitin-protein ligase AIP2-like [Vitis vinifera] gi|296081356|emb|CBI16789.3| unnamed protein product [Vitis vinifera] Length = 138 Score = 163 bits (412), Expect = 6e-38 Identities = 87/148 (58%), Positives = 105/148 (70%), Gaps = 4/148 (2%) Frame = -1 Query: 708 MGLSHYPSAAEGMLPVLVMNTVISVAILKNMVRWVLQVMGCAENTSDFEADTSIEG---C 538 MGLS++ S AEG+LPVLVMNTV+SVA+LKNMVR VLQVMG ++ + E D S E Sbjct: 1 MGLSNFHSPAEGVLPVLVMNTVMSVALLKNMVRSVLQVMGANGSSPNLEEDPSNEEYSPM 60 Query: 537 AERWRERRISSTLFKSLCNNGSRIGARSASGDQGSCSHWCP-MECCVCLHKFEAHQEVSE 361 +E +ERR+S T FKSL S G+ + WC M+CCVCL +FEA +EVSE Sbjct: 61 SENAKERRVSVTQFKSL------------SHSSGTGTGWCSSMDCCVCLCRFEAEEEVSE 108 Query: 360 LSCKHFFHKGCLEKWLDHKHSTCPLCRS 277 LSCKHFFHKGC EKW D+KHS+CPLCRS Sbjct: 109 LSCKHFFHKGCWEKWFDNKHSSCPLCRS 136 >ref|XP_003601903.1| RING-H2 finger protein [Medicago truncatula] gi|355490951|gb|AES72154.1| RING-H2 finger protein [Medicago truncatula] Length = 151 Score = 162 bits (410), Expect = 1e-37 Identities = 86/154 (55%), Positives = 107/154 (69%), Gaps = 10/154 (6%) Frame = -1 Query: 708 MGLSHYPSAAEGMLPVLVMNTVISVAILKNMVRWVLQVMGCAENTSDFEADTSIEGCAER 529 MGLS++P AAEG++PV+VMNTV+S+ +LKNM R +LQV+GC T+ + +E E Sbjct: 1 MGLSNFPYAAEGVVPVIVMNTVLSMVLLKNMFRSMLQVVGCTSTTNSSYSPNIMEELEEE 60 Query: 528 W---------RERRISSTLFKSLCNNGSRIGARSASGDQGSCSHWCPM-ECCVCLHKFEA 379 RERR+S T +K LC N S I ARS+S SC PM ECCVCL FEA Sbjct: 61 QVYSQEISNSRERRVSITQYKFLCYNRSNI-ARSSS----SCGWTSPMVECCVCLSGFEA 115 Query: 378 HQEVSELSCKHFFHKGCLEKWLDHKHSTCPLCRS 277 +QEVSEL CKHFFH+GCL+KW D+KHS+CPLCRS Sbjct: 116 NQEVSELPCKHFFHRGCLDKWFDNKHSSCPLCRS 149 >ref|XP_003551995.1| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Glycine max] Length = 134 Score = 154 bits (390), Expect = 2e-35 Identities = 83/147 (56%), Positives = 105/147 (71%), Gaps = 3/147 (2%) Frame = -1 Query: 708 MGLSHYPSAAEGMLPVLVMNTVISVAILKNMVRWVLQVM---GCAENTSDFEADTSIEGC 538 MGLS++PSA+EG+LPVLV+NTV+SVA+LKNM R +LQV+ A N S+ E D E Sbjct: 1 MGLSNFPSASEGVLPVLVINTVLSVAVLKNMFRSMLQVVLGGSAAANGSNIEHD---ESS 57 Query: 537 AERWRERRISSTLFKSLCNNGSRIGARSASGDQGSCSHWCPMECCVCLHKFEAHQEVSEL 358 + W ERR+S T +KSLC+ S D G S +ECCVCL +FEA+QEVSEL Sbjct: 58 SSSW-ERRVSITQYKSLCH----------SHDIGGTS-MAMVECCVCLCRFEANQEVSEL 105 Query: 357 SCKHFFHKGCLEKWLDHKHSTCPLCRS 277 CKH+FH+GCL+KW D+KH+TCPLCRS Sbjct: 106 PCKHYFHRGCLDKWFDNKHTTCPLCRS 132 >ref|XP_002314594.1| predicted protein [Populus trichocarpa] gi|222863634|gb|EEF00765.1| predicted protein [Populus trichocarpa] Length = 133 Score = 154 bits (388), Expect = 4e-35 Identities = 86/145 (59%), Positives = 102/145 (70%), Gaps = 1/145 (0%) Frame = -1 Query: 708 MGLSHYPSAAEGMLPVLVMNTVISVAILKNMVRWVLQ-VMGCAENTSDFEADTSIEGCAE 532 MGLS +P AAEG+LPVLVMNTV+SVA+LK+MVR VLQ V+G D+E + E E Sbjct: 1 MGLSSFPGAAEGVLPVLVMNTVLSVALLKSMVRSVLQLVVGANWTPPDYEEEPD-EYRRE 59 Query: 531 RWRERRISSTLFKSLCNNGSRIGARSASGDQGSCSHWCPMECCVCLHKFEAHQEVSELSC 352 RERRIS T FKSL N GAR+++ MECCVCL FEA +EVSELSC Sbjct: 60 NARERRISITQFKSLNQNDG--GARNSA-----------MECCVCLCGFEAEEEVSELSC 106 Query: 351 KHFFHKGCLEKWLDHKHSTCPLCRS 277 KHFFH+GCL+KW D+ H+TCPLCRS Sbjct: 107 KHFFHRGCLDKWFDNIHATCPLCRS 131 >gb|AEG64816.1| RING-H2 type zinc finger [Avicennia marina] Length = 150 Score = 147 bits (372), Expect = 3e-33 Identities = 79/148 (53%), Positives = 100/148 (67%), Gaps = 4/148 (2%) Frame = -1 Query: 708 MGLSHYPSAAEGMLPVLVMNTVISVAILKNMVRWVLQVMGCAENTSDFEADTSI-EGCAE 532 MGLS++ S AEG+L +LVMNTV+SVAI+KN +R VLQV+G SD E + E + Sbjct: 1 MGLSNFSSPAEGVLHLLVMNTVMSVAIVKNKLRSVLQVVGAGGGDSDQEFEEEYGEDESG 60 Query: 531 RWRERRISSTLFKSLCNNGSRIGARSASGDQ--GSCSHWCP-MECCVCLHKFEAHQEVSE 361 R RR+S T + SLC + R G G +W P +ECCVCL +FEA +EVSE Sbjct: 61 GSRTRRVSVTRYGSLCRDRCGCSPRERGGSTAAGDGGYWPPAVECCVCLSRFEADEEVSE 120 Query: 360 LSCKHFFHKGCLEKWLDHKHSTCPLCRS 277 LSCKHFFHKGCL+KW D+++ TCPLCRS Sbjct: 121 LSCKHFFHKGCLDKWFDNQNITCPLCRS 148