BLASTX nr result

ID: Coptis21_contig00014737 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014737
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282173.1| PREDICTED: uncharacterized protein LOC100261...   153   6e-35
ref|XP_002279283.1| PREDICTED: putative GATA transcription facto...   122   2e-25
emb|CAN63090.1| hypothetical protein VITISV_032017 [Vitis vinifera]   120   3e-25
ref|XP_003550634.1| PREDICTED: putative GATA transcription facto...   107   4e-21
gb|ADL36695.1| GATA domain class transcription factor [Malus x d...   106   7e-21

>ref|XP_002282173.1| PREDICTED: uncharacterized protein LOC100261004 [Vitis vinifera]
           gi|297738668|emb|CBI27913.3| unnamed protein product
           [Vitis vinifera]
          Length = 309

 Score =  153 bits (386), Expect = 6e-35
 Identities = 90/240 (37%), Positives = 126/240 (52%), Gaps = 9/240 (3%)
 Frame = -1

Query: 693 QEGSYSIQILKQYQQSQEI-DEYALNGGSSDRQXXXXXXXXXXXXXXEYGLKLSLFE--- 526
           ++G    + L Q Q  QE  D++   GGS D                  GLKL++++   
Sbjct: 53  EQGGCHYRDLHQAQPQQEAHDKFVFRGGSYDHPTLESESDN--------GLKLTIWKTED 104

Query: 525 -GDQQKDVDPLSWMSSKMRLMKKMINPDRMDAEKPIRSKLWFQDQNQSSSPTNAN---IS 358
             +   +   + WMSSKMR+M+KM+  D+  A+KP  + L F D  Q S P+  +   I+
Sbjct: 105 RNENHSENGSVKWMSSKMRVMQKMMISDQTGAQKPSNTALNFGDHKQQSLPSETDYNSIN 164

Query: 357 SDSLANNTMIRTCSDCNTTRTPLWRSGPKGPKSLCNACGIXXXXXXXXXXXXXXXXRNGV 178
           S ++ +N  IR C+DCNTT+TPLWRSGP+GPKSLCNACGI                   +
Sbjct: 165 SSNINSNNTIRVCADCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAATANGTI 224

Query: 177 AHTDTSPVQTKLHFTKKKSGKGHVAQQNKQFKLGITPH-NRRNHGFEDFIVNLSNNLAFH 1
             T+T+P +TK     KKS  GHV+   K+ KL   P    +   FEDF ++LS N AFH
Sbjct: 225 LPTNTAPTKTKAKHKDKKSSNGHVSHYKKRCKLAAAPSCETKKLCFEDFTISLSKNSAFH 284


>ref|XP_002279283.1| PREDICTED: putative GATA transcription factor 22 [Vitis vinifera]
           gi|296081660|emb|CBI20665.3| unnamed protein product
           [Vitis vinifera]
          Length = 306

 Score =  122 bits (305), Expect = 2e-25
 Identities = 88/236 (37%), Positives = 119/236 (50%), Gaps = 6/236 (2%)
 Frame = -1

Query: 693 QEGSYSIQILKQYQQSQEIDEYALNGGSSDRQXXXXXXXXXXXXXXEYGL-KLSLF---E 526
           Q G +S +  +Q++     D+Y  +GG  + Q                   KLS+F   E
Sbjct: 56  QRGDHSPRDPQQHEDKD--DKYISHGGCGESQVFSSSSLLQPMADDNKSSHKLSVFKKEE 113

Query: 525 GDQ-QKDVDPLSWMSSKMRLMKKMINPDRMDAEKPIRSKLWFQDQNQSSSPTNANISSDS 349
           GD+  K  +   WMSSKMRLM+KM+N D   A+  I  K+  +D  Q  +    N S+++
Sbjct: 114 GDEGNKSTE--KWMSSKMRLMRKMMNSDCTTAK--IEQKV--EDHQQWDNINEFNSSNNT 167

Query: 348 LANNTMIRTCSDCNTTRTPLWRSGPKGPKSLCNACGIXXXXXXXXXXXXXXXXRNGVA-H 172
             +N  IR CSDCNTT+TPLWRSGP+GPKSLCNACGI                 NG A  
Sbjct: 168 --SNIPIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAAAAANGTAVG 225

Query: 171 TDTSPVQTKLHFTKKKSGKGHVAQQNKQFKLGITPHNRRNHGFEDFIVNLSNNLAF 4
           T+ SP++ KL   +KK    +V QQ K  K    P   +   FEDF  ++  N  F
Sbjct: 226 TEISPMKMKLPNKEKKMHTSNVGQQKKLCKPPCPPPTEKKLCFEDFTSSICKNSGF 281


>emb|CAN63090.1| hypothetical protein VITISV_032017 [Vitis vinifera]
          Length = 211

 Score =  120 bits (302), Expect = 3e-25
 Identities = 79/185 (42%), Positives = 102/185 (55%), Gaps = 5/185 (2%)
 Frame = -1

Query: 543 KLSLF---EGDQ-QKDVDPLSWMSSKMRLMKKMINPDRMDAEKPIRSKLWFQDQNQSSSP 376
           KLS+F   EGD+  K  +   WMSSKMRLM+KM+N D   A+  I  K+  +D  Q  + 
Sbjct: 10  KLSVFKKEEGDEGNKSTE--KWMSSKMRLMRKMMNSDCTTAK--IEQKV--EDHQQWDNI 63

Query: 375 TNANISSDSLANNTMIRTCSDCNTTRTPLWRSGPKGPKSLCNACGIXXXXXXXXXXXXXX 196
              N S+++  +N  IR CSDCNTT+TPLWRSGP+GPKSLCNACGI              
Sbjct: 64  NEXNSSNNT--SNIPIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAA 121

Query: 195 XXRNGVA-HTDTSPVQTKLHFTKKKSGKGHVAQQNKQFKLGITPHNRRNHGFEDFIVNLS 19
              NG A  T+ SP++ KL   +KK    +V QQ K  K    P   +   FEDF  ++ 
Sbjct: 122 AAANGTAVGTEISPMKMKLPNKEKKMHTSNVGQQKKLCKPPCPPPTEKKLCFEDFTSSIC 181

Query: 18  NNLAF 4
            N  F
Sbjct: 182 KNSGF 186


>ref|XP_003550634.1| PREDICTED: putative GATA transcription factor 22-like [Glycine max]
          Length = 322

 Score =  107 bits (267), Expect = 4e-21
 Identities = 72/181 (39%), Positives = 92/181 (50%), Gaps = 15/181 (8%)
 Frame = -1

Query: 498 LSWMSSKMRLMKKMINPDRMDA--EKPIRSKLWFQDQNQS-SSPTNA-NISSDSLAN--N 337
           L WM +KMR+M+KM+  D+ D        +   F DQ Q  SSP    N SS++ +N  N
Sbjct: 119 LKWMPAKMRIMRKMLVSDQTDTYTNSDNNTTHKFDDQKQQLSSPLGTDNSSSNNYSNHSN 178

Query: 336 TMIRTCSDCNTTRTPLWRSGPKGPKSLCNACGI-XXXXXXXXXXXXXXXXRNGVAHTDT- 163
             +R CSDC+TT+TPLWRSGP+GPKSLCNACGI                  NG    +  
Sbjct: 179 NTVRVCSDCHTTKTPLWRSGPRGPKSLCNACGIRQRKARRAMAAAAASASGNGTVIVEAK 238

Query: 162 SPVQTKLHFTKKKSGKGH---VAQQNKQFKLGI----TPHNRRNHGFEDFIVNLSNNLAF 4
             V+ +    KKK  K      AQ  K+ KLG+       +R   GFED  + L  NLA 
Sbjct: 239 KSVKGRNKLQKKKEKKTRTEGAAQMKKKRKLGVGSAKASQSRNKFGFEDLTLRLRKNLAM 298

Query: 3   H 1
           H
Sbjct: 299 H 299


>gb|ADL36695.1| GATA domain class transcription factor [Malus x domestica]
          Length = 359

 Score =  106 bits (265), Expect = 7e-21
 Identities = 73/195 (37%), Positives = 101/195 (51%), Gaps = 25/195 (12%)
 Frame = -1

Query: 522 DQQKDVDPLSWMSSKMRLMKKMINPDRMDA------EKPIRSKLW---FQDQN--QSSSP 376
           D +     + WMSSKMR+M+KM NPD+  +      +KPI  KL    F++Q     SS 
Sbjct: 127 DHETSTSSVKWMSSKMRMMRKMSNPDQTSSSSTSSDDKPISMKLSSHKFEEQKLQHPSSQ 186

Query: 375 TNA------NISSDSLANNTMIRTCSDCNTTRTPLWRSGPKGPKSLCNACGIXXXXXXXX 214
             A      N SS+++ N  +IR CSDCNTT+TPLWRSGP+GPKSLCNACGI        
Sbjct: 187 LGADMISCSNNSSNNMNNVPIIRVCSDCNTTKTPLWRSGPRGPKSLCNACGI-RQRKARR 245

Query: 213 XXXXXXXXRNGVAHTDTSPVQTKLHFTKKKSGKGHVA-----QQNKQFKLGITPHNR--- 58
                    +G   T  +P   K    + K+ K  V+     ++    KL  +P +R   
Sbjct: 246 AMAAAAAAASGTTLTVAAP-SMKSSKVQPKANKSRVSSTVPFKKRPYNKLSSSPSSRGKS 304

Query: 57  RNHGFEDFIVNLSNN 13
           +   FEDF +++ NN
Sbjct: 305 KKLCFEDFTISMKNN 319


Top