BLASTX nr result

ID: Coptis21_contig00014714 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014714
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE66599.1| hypothetical protein OsJ_23164 [Oryza sativa Japo...    82   4e-14
gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japo...    82   4e-14
gb|ABA94593.2| retrotransposon protein, putative, unclassified [...    82   4e-14
ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja...    79   4e-13

>gb|EEE66599.1| hypothetical protein OsJ_23164 [Oryza sativa Japonica Group]
          Length = 813

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 41/82 (50%), Positives = 52/82 (63%)
 Frame = +2

Query: 2   QDFTEAEVQLALFEMEDNKAPGPDGFNAFFFKKNWQHVKDKFVKAVISVFALKAIHRGVN 181
           +DFTE E+  ALF++   KAPGPDGF A FF++NW  +K   V AV S F    +  GVN
Sbjct: 500 KDFTEQEIADALFQIGPIKAPGPDGFPARFFQRNWDAIKKDVVSAVKSFFETSIMPEGVN 559

Query: 182 STHICLIPKCATPSRVEEFRPI 247
            T I LIPK   P  +++FRPI
Sbjct: 560 DTAIVLIPKVDQPMELKDFRPI 581


>gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group]
          Length = 1102

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 36/81 (44%), Positives = 56/81 (69%)
 Frame = +2

Query: 5    DFTEAEVQLALFEMEDNKAPGPDGFNAFFFKKNWQHVKDKFVKAVISVFALKAIHRGVNS 184
            D TE E+  A+F++   KAPGPDGF+A F+++NW  +K + VKAV + F +  +  G+N 
Sbjct: 847  DLTEEEISTAIFQIGPLKAPGPDGFSAKFYQRNWGTIKSEVVKAVHNFFIIGVMPEGIND 906

Query: 185  THICLIPKCATPSRVEEFRPI 247
            T I LIPK   P++++++RPI
Sbjct: 907  TAIVLIPKIKQPTQLKDYRPI 927


>gb|ABA94593.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1469

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 36/81 (44%), Positives = 56/81 (69%)
 Frame = +2

Query: 5    DFTEAEVQLALFEMEDNKAPGPDGFNAFFFKKNWQHVKDKFVKAVISVFALKAIHRGVNS 184
            D TE E+  A+F++   KAPGPDGF+A F+++NW  +K + VKAV + F +  +  G+N 
Sbjct: 840  DLTEEEISTAIFQIGPLKAPGPDGFSAKFYQRNWGTIKSEVVKAVHNFFIIGVMPEGIND 899

Query: 185  THICLIPKCATPSRVEEFRPI 247
            T I LIPK   P++++++RPI
Sbjct: 900  TAIVLIPKIKQPTQLKDYRPI 920


>ref|XP_002331746.1| predicted protein [Populus trichocarpa] gi|222874272|gb|EEF11403.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 38/82 (46%), Positives = 56/82 (68%)
 Frame = +2

Query: 2   QDFTEAEVQLALFEMEDNKAPGPDGFNAFFFKKNWQHVKDKFVKAVISVFALKAIHRGVN 181
           Q  T  E++ A+F +++NKAPG DGFNA FFK+ W  V +  + AV S+F  + + + +N
Sbjct: 412 QVVTRKEIKHAMFSLKNNKAPGLDGFNAGFFKRMWHIVGEDVINAVRSLFQTRRMLKEMN 471

Query: 182 STHICLIPKCATPSRVEEFRPI 247
           +T I LIPK A P+R+ +FRPI
Sbjct: 472 ATSISLIPKVANPTRLTDFRPI 493


>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1888

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/80 (47%), Positives = 52/80 (65%)
 Frame = +2

Query: 8    FTEAEVQLALFEMEDNKAPGPDGFNAFFFKKNWQHVKDKFVKAVISVFALKAIHRGVNST 187
            F+E E+  ALF++   KAPGPDGF   F+++NW  +KD  V+AV   F+L  +  GVN T
Sbjct: 999  FSEEEIANALFQIGPLKAPGPDGFPGRFYQRNWAILKDDIVRAVQEFFSLGTMPSGVNET 1058

Query: 188  HICLIPKCATPSRVEEFRPI 247
             I LIPK   P  +++FRPI
Sbjct: 1059 AIVLIPKTEQPQELKDFRPI 1078


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