BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014713
         (486 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig ...   128   4e-28
ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258...   127   7e-28
emb|CAN74120.1| hypothetical protein VITISV_034895 [Vitis vinifera]   127   7e-28
ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group] g...   125   3e-27
gb|ABK94132.1| unknown [Populus trichocarpa]                          124   1e-26

>sp|D9J034.1|WHY2_SOLTU RecName: Full=Single-stranded DNA-bindig protein WHY2,
           mitochondrial; AltName: Full=Protein WHIRLY 2;
           Short=StWHY2; Flags: Precursor
           gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
           tuberosum]
          Length = 238

 Score =  128 bits (322), Expect = 4e-28
 Identities = 70/147 (47%), Positives = 97/147 (65%), Gaps = 13/147 (8%)
 Frame = +2

Query: 83  MMKFTQLLRHRSNVTEKVLPGKVTDSMNALWTRSFTSQA----------VSAGSRTGYVS 232
           M+K ++LL  R+ +  K LPG+      ++W  +  + A            AG R G V 
Sbjct: 1   MLKVSRLLHPRNQLLHKKLPGECVKG--SIWQHAINTFAGFSTVRQNVVADAGKREGRVF 58

Query: 233 ADYSIFKGKAALLTAPKVPTFNQTNN---RIDKKGCIMLTFMPAVGERKYDYERRQVFAL 403
           A YS+FKGKAAL   P++PTFN+ ++   +++++G IMLTF P+VGERKYD+E+RQ+FAL
Sbjct: 59  APYSVFKGKAALSAEPRLPTFNRLDSGGVKLNRRGVIMLTFWPSVGERKYDWEKRQLFAL 118

Query: 404 SPTEVGSLISLESGKSCEFFHDPSMKS 484
           S TEVGSLIS+ +  S EFFHDPSM S
Sbjct: 119 SATEVGSLISMGTRDSSEFFHDPSMLS 145


>ref|XP_002267315.1| PREDICTED: uncharacterized protein LOC100258449 [Vitis vinifera]
           gi|297734756|emb|CBI16990.3| unnamed protein product
           [Vitis vinifera]
          Length = 231

 Score =  127 bits (320), Expect = 7e-28
 Identities = 67/146 (45%), Positives = 93/146 (63%), Gaps = 12/146 (8%)
 Frame = +2

Query: 83  MMKFTQLLRHRSNVTEKVLPGKVTDSMNALWTRSFTSQA---------VSAGSRTGYVSA 235
           MMK  QLL+ R++++E +L GK  D  N  W  +FTS+             G+    V A
Sbjct: 1   MMKLKQLLQSRTHLSENLLHGKPGDIRNPSWLHAFTSRVSLSTATDHFADKGNYPDRVYA 60

Query: 236 DYSIFKGKAALLTAPKVPTFNQTNN---RIDKKGCIMLTFMPAVGERKYDYERRQVFALS 406
            Y ++KGKA+L   P +P F++ ++   ++D+ G +ML F PAVGERKYD+E++Q FALS
Sbjct: 61  PYCVYKGKASLTVYPVLPKFSRLDSGGLKVDRHGVMMLQFSPAVGERKYDWEKKQFFALS 120

Query: 407 PTEVGSLISLESGKSCEFFHDPSMKS 484
             EVGSL+SL  G  CEFFHDPSMK+
Sbjct: 121 AVEVGSLLSLSPGGGCEFFHDPSMKT 146


>emb|CAN74120.1| hypothetical protein VITISV_034895 [Vitis vinifera]
          Length = 185

 Score =  127 bits (320), Expect = 7e-28
 Identities = 67/146 (45%), Positives = 93/146 (63%), Gaps = 12/146 (8%)
 Frame = +2

Query: 83  MMKFTQLLRHRSNVTEKVLPGKVTDSMNALWTRSFTSQA---------VSAGSRTGYVSA 235
           MMK  QLL+ R++++E +L GK  D  N  W  +FTS+             G+    V A
Sbjct: 1   MMKLKQLLQSRTHLSENLLHGKPGDIRNPSWLHAFTSRVSLSTATDHFADKGNYPDRVYA 60

Query: 236 DYSIFKGKAALLTAPKVPTFNQTNN---RIDKKGCIMLTFMPAVGERKYDYERRQVFALS 406
            Y ++KGKA+L   P +P F++ ++   ++D+ G +ML F PAVGERKYD+E++Q FALS
Sbjct: 61  PYCVYKGKASLTVYPVLPKFSRLDSGGLKVDRHGVMMLQFSPAVGERKYDWEKKQFFALS 120

Query: 407 PTEVGSLISLESGKSCEFFHDPSMKS 484
             EVGSL+SL  G  CEFFHDPSMK+
Sbjct: 121 AVEVGSLLSLSPGGGCEFFHDPSMKT 146


>ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group]
           gi|50251252|dbj|BAD28032.1| putative Chain C, Structure
           Of The Plant Transcriptional Regulator Pbf-2 [Oryza
           sativa Japonica Group] gi|50252182|dbj|BAD28177.1|
           putative Chain C, Structure Of The Plant Transcriptional
           Regulator Pbf-2 [Oryza sativa Japonica Group]
           gi|113535487|dbj|BAF07870.1| Os02g0158400 [Oryza sativa
           Japonica Group] gi|215692593|dbj|BAG88013.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215704516|dbj|BAG94149.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740785|dbj|BAG96941.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218190103|gb|EEC72530.1| hypothetical protein
           OsI_05924 [Oryza sativa Indica Group]
           gi|222622212|gb|EEE56344.1| hypothetical protein
           OsJ_05450 [Oryza sativa Japonica Group]
          Length = 228

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/121 (55%), Positives = 86/121 (71%), Gaps = 8/121 (6%)
 Frame = +2

Query: 146 KVTDSMNALWTRSFTSQ----AVSAGSRT-GYVSADYSIFKGKAALLTAPKVPTFNQTNN 310
           +VTD  +ALW+ S T Q      +A   T G   A Y++FKGKAAL   P +P+F++  +
Sbjct: 14  RVTDLKDALWSGSLTFQHALSTFAADENTSGRKFASYTVFKGKAALSMQPILPSFSKLES 73

Query: 311 ---RIDKKGCIMLTFMPAVGERKYDYERRQVFALSPTEVGSLISLESGKSCEFFHDPSMK 481
              R++K G +MLTF PAVG+RKYDY ++Q+FALSPTEVGSLISL   +SCEFFHDPSMK
Sbjct: 74  GGSRVNKNGSVMLTFFPAVGQRKYDYSKKQLFALSPTEVGSLISLGPAESCEFFHDPSMK 133

Query: 482 S 484
           S
Sbjct: 134 S 134


>gb|ABK94132.1| unknown [Populus trichocarpa]
          Length = 229

 Score =  124 bits (310), Expect = 1e-26
 Identities = 72/141 (51%), Positives = 90/141 (63%), Gaps = 7/141 (4%)
 Frame = +2

Query: 83  MMKFTQLLRHRSNVTEKVLPGKVTDSMNALWTRSFTSQA-VSAGSRTGY---VSADYSIF 250
           MMK ++ L    N       GK TD  +     + T QA +S G ++     V A YS+F
Sbjct: 1   MMKLSRFLNFNRNAV-----GKPTDVRDGSALHALTFQASISTGGKSSIQDRVFAPYSVF 55

Query: 251 KGKAALLTAPKVPTFNQT---NNRIDKKGCIMLTFMPAVGERKYDYERRQVFALSPTEVG 421
           KGKAAL   P +PTF++    N R+D++G +MLTF+PA+GERKYDYE+RQ FALS TEVG
Sbjct: 56  KGKAALSVEPVLPTFSKFGSGNLRVDRRGSMMLTFLPAIGERKYDYEKRQKFALSATEVG 115

Query: 422 SLISLESGKSCEFFHDPSMKS 484
           SLIS     SCEFFHDPSM S
Sbjct: 116 SLISTGPKDSCEFFHDPSMLS 136