BLASTX nr result

ID: Coptis21_contig00014712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014712
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825...   127   1e-27
ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group] g...   122   3e-26
gb|AGE44298.1| whirly transcription factor domain containing pro...   122   4e-26
ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [S...   121   6e-26
gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidops...   121   8e-26

>ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825843 [Brachypodium
           distachyon]
          Length = 231

 Score =  127 bits (319), Expect = 1e-27
 Identities = 60/101 (59%), Positives = 77/101 (76%)
 Frame = -3

Query: 546 DPSMKSSNAGQVRKSLSVSPYGEDSGFFFNLSVVNNILKTNERFSVPVSKAEFAVLRTAF 367
           DPSMKSS+ GQV+KSLS++P G D+G+F N++V+NN+ KTNER SVPV+KAEFAV+RTA 
Sbjct: 131 DPSMKSSHEGQVKKSLSITPLGNDNGYFVNITVLNNVQKTNERLSVPVTKAEFAVMRTAL 190

Query: 366 SYILPHIMGWDQYTKQVQTSGDLNSVRLLEKRPSPNSEWDR 244
           SY LPHIMGWDQ       S    + +   +RP P+SEW+R
Sbjct: 191 SYALPHIMGWDQALTSHPQSPTAPASKPRVERPHPDSEWER 231


>ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group]
           gi|50251252|dbj|BAD28032.1| putative Chain C, Structure
           Of The Plant Transcriptional Regulator Pbf-2 [Oryza
           sativa Japonica Group] gi|50252182|dbj|BAD28177.1|
           putative Chain C, Structure Of The Plant Transcriptional
           Regulator Pbf-2 [Oryza sativa Japonica Group]
           gi|113535487|dbj|BAF07870.1| Os02g0158400 [Oryza sativa
           Japonica Group] gi|215692593|dbj|BAG88013.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215704516|dbj|BAG94149.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215740785|dbj|BAG96941.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218190103|gb|EEC72530.1| hypothetical protein
           OsI_05924 [Oryza sativa Indica Group]
           gi|222622212|gb|EEE56344.1| hypothetical protein
           OsJ_05450 [Oryza sativa Japonica Group]
          Length = 228

 Score =  122 bits (307), Expect = 3e-26
 Identities = 60/101 (59%), Positives = 76/101 (75%)
 Frame = -3

Query: 546 DPSMKSSNAGQVRKSLSVSPYGEDSGFFFNLSVVNNILKTNERFSVPVSKAEFAVLRTAF 367
           DPSMKSS+ GQV+KSLSV+P G DSG+F N++V+NN+ KT ER S+P+SKAEF V+RTA 
Sbjct: 129 DPSMKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQKTTERLSLPISKAEFTVMRTAL 188

Query: 366 SYILPHIMGWDQYTKQVQTSGDLNSVRLLEKRPSPNSEWDR 244
           S+ LPHI+GWDQ     Q S    S   +E RP P+SEW+R
Sbjct: 189 SFALPHILGWDQALTNHQPSPSPASKPRVE-RPHPDSEWER 228


>gb|AGE44298.1| whirly transcription factor domain containing protein [Musa AB
           Group]
          Length = 245

 Score =  122 bits (306), Expect = 4e-26
 Identities = 60/102 (58%), Positives = 74/102 (72%), Gaps = 1/102 (0%)
 Frame = -3

Query: 546 DPSMKSSNAGQVRKSLSVSPYGEDSGFFFNLSVVNNILKTNERFSVPVSKAEFAVLRTAF 367
           DPSMKSS  GQV+KSLS+SP  + +G+  NLSVVNNI KTNERFS+PVSKAEF  +RT F
Sbjct: 144 DPSMKSSLEGQVKKSLSISPLNDKAGYLLNLSVVNNIQKTNERFSLPVSKAEFTAIRTVF 203

Query: 366 SYILPHIMGWDQ-YTKQVQTSGDLNSVRLLEKRPSPNSEWDR 244
           SY+LPHIMGW Q  + Q  ++        +E+RP P+ EW R
Sbjct: 204 SYVLPHIMGWSQAASPQPPSTATHTPKEQIEERPDPSLEWGR 245


>ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [Sorghum bicolor]
           gi|241933167|gb|EES06312.1| hypothetical protein
           SORBIDRAFT_04g004060 [Sorghum bicolor]
          Length = 230

 Score =  121 bits (304), Expect = 6e-26
 Identities = 59/101 (58%), Positives = 75/101 (74%)
 Frame = -3

Query: 546 DPSMKSSNAGQVRKSLSVSPYGEDSGFFFNLSVVNNILKTNERFSVPVSKAEFAVLRTAF 367
           DPSMKSSN G V+KSLS++P G DSG+F N++VVN++ KTN+R SVP++KAEFAV+RT  
Sbjct: 131 DPSMKSSNEGMVKKSLSITPLGSDSGYFVNITVVNSVEKTNDRLSVPITKAEFAVMRTTL 190

Query: 366 SYILPHIMGWDQYTKQVQTSGDLNSVRLLEKRPSPNSEWDR 244
           S+ LPHIMGWDQ       S    S   +E RP P+SEW+R
Sbjct: 191 SFALPHIMGWDQALTNHHPSPPAISKPRVE-RPHPDSEWER 230


>gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidopsis thaliana]
          Length = 237

 Score =  121 bits (303), Expect = 8e-26
 Identities = 61/102 (59%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
 Frame = -3

Query: 546 DPSMKSSNAGQVRKSLSVSPYGEDSGFFFNLSVVNNILKTNERFSVPVSKAEFAVLRTAF 367
           DPSMKSSNAGQVRKSLSV P+ + SG+F +LSV N+ILKTN+ F VPV+KAEFAV++TAF
Sbjct: 136 DPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAF 195

Query: 366 SYILPHIMGWDQYTKQVQTSG-DLNSVRLLEKRPSPNSEWDR 244
           S+ LPHIMGW++ T  V T      +V  L+  P    EWD+
Sbjct: 196 SFALPHIMGWNRLTGHVNTEALPSRNVSHLKTEPQLELEWDK 237


Top