BLASTX nr result
ID: Coptis21_contig00014681
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014681 (821 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002264233.2| PREDICTED: photosystem I reaction center sub... 217 3e-54 emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera] 216 5e-54 gb|AFW90564.1| photosystem I reaction center V (chloroplast) [So... 214 2e-53 gb|AFW90624.1| photosystem I reaction center V (chloroplast) [So... 212 7e-53 gb|AFS88925.1| chloroplast photosystem I reaction center subunit... 210 3e-52 >ref|XP_002264233.2| PREDICTED: photosystem I reaction center subunit V, chloroplastic [Vitis vinifera] gi|296090036|emb|CBI39855.3| unnamed protein product [Vitis vinifera] Length = 194 Score = 217 bits (552), Expect = 3e-54 Identities = 118/170 (69%), Positives = 127/170 (74%) Frame = -1 Query: 689 SATGLLSTPTAAFANNNKQTYYNHLQHHCGFQGLRPLNKPTDTSFVNTXXXXXXXXXXXA 510 +++ S PT + A Q HL H FQGLRPL+KPTD S Sbjct: 35 ASSAFFSAPTFSSAATTLQ---KHLPHQ-SFQGLRPLSKPTDLSLTIPRMSTRPIP---- 86 Query: 509 LERKQRRGGVRAELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGVTHFEAGD 330 K+ G VRAELN SLVISLSTGLSLFLGRFVFFNFQRENVAKQVP+QNG+THFEAGD Sbjct: 87 ---KRSAGVVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGD 143 Query: 329 TRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHFVAYYILATSSNGYDPKFF 180 +RAKEYVSLLKSNDPVGFNIVDVLAWGSIGH VAYYILATSSNGYDPKFF Sbjct: 144 SRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 193 >emb|CAN74757.1| hypothetical protein VITISV_026412 [Vitis vinifera] Length = 161 Score = 216 bits (550), Expect = 5e-54 Identities = 118/170 (69%), Positives = 127/170 (74%) Frame = -1 Query: 689 SATGLLSTPTAAFANNNKQTYYNHLQHHCGFQGLRPLNKPTDTSFVNTXXXXXXXXXXXA 510 +++ S PT + A Q HL H FQGLRPL+KPTD S Sbjct: 2 ASSAFFSAPTFSSAATTLQ---KHLPHQY-FQGLRPLSKPTDLSLTIPRMSTRPIP---- 53 Query: 509 LERKQRRGGVRAELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGVTHFEAGD 330 K+ G VRAELN SLVISLSTGLSLFLGRFVFFNFQRENVAKQVP+QNG+THFEAGD Sbjct: 54 ---KRSAGVVRAELNTSLVISLSTGLSLFLGRFVFFNFQRENVAKQVPQQNGLTHFEAGD 110 Query: 329 TRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHFVAYYILATSSNGYDPKFF 180 +RAKEYVSLLKSNDPVGFNIVDVLAWGSIGH VAYYILATSSNGYDPKFF Sbjct: 111 SRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATSSNGYDPKFF 160 >gb|AFW90564.1| photosystem I reaction center V (chloroplast) [Solanum tuberosum] Length = 146 Score = 214 bits (545), Expect = 2e-53 Identities = 109/141 (77%), Positives = 118/141 (83%), Gaps = 1/141 (0%) Frame = -1 Query: 599 FQGLRPLNKPTDTS-FVNTXXXXXXXXXXXALERKQRRGGVRAELNPSLVISLSTGLSLF 423 FQGLRPLNKPTD+S F+N + +K R V+AELNPS+VISLSTGLSLF Sbjct: 11 FQGLRPLNKPTDSSLFLNKPIAFKP------ITKKTRNLAVKAELNPSIVISLSTGLSLF 64 Query: 422 LGRFVFFNFQRENVAKQVPEQNGVTHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGSI 243 LGRFVFFNFQRENVAKQVP QNG++HFEAGD RAKEY+SLLKSNDPVGFNIVDVLAWGSI Sbjct: 65 LGRFVFFNFQRENVAKQVPSQNGISHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSI 124 Query: 242 GHFVAYYILATSSNGYDPKFF 180 GH VAYYILATSSNGYDP FF Sbjct: 125 GHIVAYYILATSSNGYDPSFF 145 >gb|AFW90624.1| photosystem I reaction center V (chloroplast) [Solanum tuberosum] Length = 146 Score = 212 bits (540), Expect = 7e-53 Identities = 108/141 (76%), Positives = 118/141 (83%), Gaps = 1/141 (0%) Frame = -1 Query: 599 FQGLRPLNKPTDTS-FVNTXXXXXXXXXXXALERKQRRGGVRAELNPSLVISLSTGLSLF 423 FQGLRPLNKPTD+S F+N + +K R V+AELNPS+VISLSTGLSLF Sbjct: 11 FQGLRPLNKPTDSSLFLNKPIAFKP------ITKKTRNLAVKAELNPSIVISLSTGLSLF 64 Query: 422 LGRFVFFNFQRENVAKQVPEQNGVTHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGSI 243 LGRFVFFNFQRENVAKQVP Q+G++HFEAGD RAKEY+SLLKSNDPVGFNIVDVLAWGSI Sbjct: 65 LGRFVFFNFQRENVAKQVPSQDGISHFEAGDVRAKEYISLLKSNDPVGFNIVDVLAWGSI 124 Query: 242 GHFVAYYILATSSNGYDPKFF 180 GH VAYYILATSSNGYDP FF Sbjct: 125 GHIVAYYILATSSNGYDPSFF 145 >gb|AFS88925.1| chloroplast photosystem I reaction center subunit V-2 [Musa AB Group] gi|421958217|gb|AFX72947.1| photosystem I reaction center subunit V-2 [Musa AB Group] Length = 160 Score = 210 bits (535), Expect = 3e-52 Identities = 113/142 (79%), Positives = 120/142 (84%), Gaps = 2/142 (1%) Frame = -1 Query: 599 FQGLRPLNKPTDTS-FVNTXXXXXXXXXXXALERKQRRGGVRAELNPSLVISLSTGLSLF 423 F+GLRPL KPTD+S F T + R ++ GG+RAELNPSLVISLSTGLSLF Sbjct: 24 FRGLRPL-KPTDSSQFPQTRAISIKP-----VRRVRKPGGIRAELNPSLVISLSTGLSLF 77 Query: 422 LGRFVFFNFQRENVAKQ-VPEQNGVTHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGS 246 LGRFVFFNFQRENVAKQ +PEQNGVTHFEAGDTRAKEYV LLKSNDPVGFNIVDVLAWGS Sbjct: 78 LGRFVFFNFQRENVAKQGLPEQNGVTHFEAGDTRAKEYVGLLKSNDPVGFNIVDVLAWGS 137 Query: 245 IGHFVAYYILATSSNGYDPKFF 180 IGH VAYYILATSSNGYDPKFF Sbjct: 138 IGHIVAYYILATSSNGYDPKFF 159