BLASTX nr result
ID: Coptis21_contig00014670
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00014670
(1020 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas... 173 5e-41
emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera] 155 1e-35
emb|CAN62051.1| hypothetical protein VITISV_016641 [Vitis vinifera] 155 2e-35
emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera] 155 2e-35
gb|ABA91475.1| retrotransposon protein, putative, unclassified [... 152 1e-34
>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
Endonuclease/exonuclease/phosphatase [Medicago
truncatula]
Length = 1246
Score = 173 bits (439), Expect = 5e-41
Identities = 102/335 (30%), Positives = 177/335 (52%), Gaps = 10/335 (2%)
Frame = -3
Query: 976 GLKFSWCNNQKGRNRVLSKIDRALFNQACEKF--------NGWSYKVKHRLFSDHAPLLG 821
G ++W N + G + V ++DRA+ N+ F G S V+H+ SDH PLL
Sbjct: 177 GAFYTWSNGRLGSDNVALRLDRAICNEEWVNFWRSSSCSALGNSALVRHQ--SDHHPLLM 234
Query: 820 RHYHIPRPQNVPFRFNKVWLSHDTFQSLVAESWREVLLGTPILKFTQKLKRLKGVIKRWN 641
++ F+F K W H+ + +VAE+W + G + + KLK +K V + WN
Sbjct: 235 SMDFCTSQRSGNFKFFKTWTEHEDCRRIVAENWSKHTRGHGMTRLQAKLKHMKQVFRHWN 294
Query: 640 VNVFGNLDNRIRKLQAEFDALQTRGDE-DLEDHVLAELVETKELQLQNALSNRAALWRQK 464
VFG++D ++R E + +Q D D + A+ +E L L AL + LWR+K
Sbjct: 295 RTVFGDVDRKVRMAVEEVNRIQQIIDSVGFSDQLYAQELEA-HLILTKALHYQDELWREK 353
Query: 463 SRVKDIKEDSRNTAYFHTMCKIKQEKHMIVEMQTEENVQLTSQGEIKDYMVKYYEEKFAL 284
R + RNTAYFH + K++ K+ I +Q + V +T I+ +++ Y++ F++
Sbjct: 354 LRDQRFIHGDRNTAYFHRISKVRATKNTISFLQDGDAV-ITDPARIEVHVLNYFQAIFSV 412
Query: 283 RSTQV-NDQLLNLVSKVITEEDNFMLCAIPLEVEIQKVVFSMKSESSPGPDGFQGCFYHA 107
++ + ND +++ + +++ DN L +PL E++ VF++ + +PGP+GF G FY
Sbjct: 413 DNSCIQNDLVVDTIPSLVSNVDNNSLLRLPLWGEVKNAVFTLNGDGAPGPNGFGGHFYQT 472
Query: 106 CWNIIKDDLCSAVTSFFREAYIPMGVNNNFLALIP 2
W+I+ D+ +V FF + +N+N + LIP
Sbjct: 473 YWDIVGADVIQSVQDFFISGQLAQNINSNLIVLIP 507
>emb|CAN65484.1| hypothetical protein VITISV_029474 [Vitis vinifera]
Length = 1882
Score = 155 bits (392), Expect = 1e-35
Identities = 105/344 (30%), Positives = 171/344 (49%), Gaps = 5/344 (1%)
Frame = -3
Query: 1018 DLINMCHLQESSFKGLKFSWCNNQKGRNRVLSKIDRALFNQACEKFNGWSYK-VKHRLFS 842
D I+ C L + + F+W N Q N V ++DR L++ E+ S + V R S
Sbjct: 828 DFISDCELIDLPLRSASFTWSNMQV--NXVCKRLDRFLYSNEWEQAFPQSIQGVLPRWTS 885
Query: 841 DHAPLLGRHYHIPRPQNVPFRFNKVWLSHDTFQSLVAESWREVL-LGTPILKFTQKLKRL 665
DH P++ + PFRF +WL H +F+ WRE G KF +KL+ +
Sbjct: 886 DHWPIVLETNPF-KWGPTPFRFENMWLQHPSFKENFGRWWREFQGNGWEGHKFMRKLQFV 944
Query: 664 KGVIKRWNVNVFGNLDNRIRKLQAE---FDALQTRGDEDLEDHVLAELVETKELQLQNAL 494
K +K WN FG L R + ++ FD+L+ G L +LA+ K+ +L+ +
Sbjct: 945 KAKLKVWNKASFGELSKRKEDILSDLVNFDSLEQEGG--LSHELLAQRA-LKKGELEELI 1001
Query: 493 SNRAALWRQKSRVKDIKEDSRNTAYFHTMCKIKQEKHMIVEMQTEENVQLTSQGEIKDYM 314
WRQK+RVK +KE N+ +FH + ++ + I E++ E + + + IK+ +
Sbjct: 1002 LREEIHWRQKARVKWVKEGDCNSRFFHKVANGRRNRKFIKELENENGLMMNNSESIKEEI 1061
Query: 313 VKYYEEKFALRSTQVNDQLLNLVSKVITEEDNFMLCAIPLEVEIQKVVFSMKSESSPGPD 134
++Y+E+ + S + + ++ L I+ E F L + E EI K +F M + +PGPD
Sbjct: 1062 LRYFEKLYTSPSGE-SWRVEGLDWSPISGESAFRLESPFTEEEIFKAIFQMDRDKAPGPD 1120
Query: 133 GFQGCFYHACWNIIKDDLCSAVTSFFREAYIPMGVNNNFLALIP 2
GF + CW +IK+DL T F R I N +F+ L+P
Sbjct: 1121 GFTIAVFQDCWEVIKEDLVKVFTEFHRSGIINQSTNASFIVLLP 1164
>emb|CAN62051.1| hypothetical protein VITISV_016641 [Vitis vinifera]
Length = 1866
Score = 155 bits (391), Expect = 2e-35
Identities = 104/344 (30%), Positives = 170/344 (49%), Gaps = 5/344 (1%)
Frame = -3
Query: 1018 DLINMCHLQESSFKGLKFSWCNNQKGRNRVLSKIDRALFNQACEKFNGWSYK-VKHRLFS 842
+ I C L +S + + ++W N Q+ N V ++DR L++ E+ S + V R S
Sbjct: 899 EFIRDCELIDSPLRSVSYTWSNMQE--NPVCKRLDRFLYSNEWEQVFPQSLQGVLPRWTS 956
Query: 841 DHAPLLGRHYHIPRPQNVPFRFNKVWLSHDTFQSLVAESWREVL-LGTPILKFTQKLKRL 665
DH P++ + PFRF +WL H +F+ W E G KF +KL+ +
Sbjct: 957 DHWPIVLETNPF-KWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMRKLQFV 1015
Query: 664 KGVIKRWNVNVFGNLDNR---IRKLQAEFDALQTRGDEDLEDHVLAELVETKELQLQNAL 494
K +K WN FG L + I + A FD+L+ G L +L + +K +L+ +
Sbjct: 1016 KAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQEGG--LSQELLVQRAFSKG-ELEELI 1072
Query: 493 SNRAALWRQKSRVKDIKEDSRNTAYFHTMCKIKQEKHMIVEMQTEENVQLTSQGEIKDYM 314
WRQK+RVK +KE N+ +FH + ++ + I E++ E + L + IK+ +
Sbjct: 1073 LREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKELENESGLMLNNPESIKEEI 1132
Query: 313 VKYYEEKFALRSTQVNDQLLNLVSKVITEEDNFMLCAIPLEVEIQKVVFSMKSESSPGPD 134
+KY+E+ +A S + + ++ L I E L + E EI K +F M + +PGPD
Sbjct: 1133 LKYFEKLYACPSRE-SWRVEGLDWSPIDGESASRLESPFTEEEIYKAIFQMDRDKAPGPD 1191
Query: 133 GFQGCFYHACWNIIKDDLCSAVTSFFREAYIPMGVNNNFLALIP 2
GF + CW++IK+DL F R I N +F+ L+P
Sbjct: 1192 GFTIAVFQDCWDVIKEDLVRVFAEFHRSGIINQSTNASFIVLLP 1235
>emb|CAN69126.1| hypothetical protein VITISV_008195 [Vitis vinifera]
Length = 1844
Score = 155 bits (391), Expect = 2e-35
Identities = 104/344 (30%), Positives = 170/344 (49%), Gaps = 5/344 (1%)
Frame = -3
Query: 1018 DLINMCHLQESSFKGLKFSWCNNQKGRNRVLSKIDRALFNQACEKFNGWSYK-VKHRLFS 842
+ I C L +S + + ++W N Q+ N V ++DR L++ E+ S + V R S
Sbjct: 921 EFIRDCELIDSPLRSVSYTWSNMQE--NPVCKRLDRFLYSNEWEQVFPQSLQGVLPRWTS 978
Query: 841 DHAPLLGRHYHIPRPQNVPFRFNKVWLSHDTFQSLVAESWREVL-LGTPILKFTQKLKRL 665
DH P++ + PFRF +WL H +F+ W E G KF +KL+ +
Sbjct: 979 DHWPIVLETNPF-KWGPTPFRFENMWLQHSSFKENFGRWWSEFQGNGWEGHKFMRKLQFV 1037
Query: 664 KGVIKRWNVNVFGNLDNR---IRKLQAEFDALQTRGDEDLEDHVLAELVETKELQLQNAL 494
K +K WN FG L + I + A FD+L+ G L +L + +K +L+ +
Sbjct: 1038 KAKLKEWNKTSFGELSKKKKDILAVLANFDSLEQEGG--LSQELLVQRAFSKG-ELEELI 1094
Query: 493 SNRAALWRQKSRVKDIKEDSRNTAYFHTMCKIKQEKHMIVEMQTEENVQLTSQGEIKDYM 314
WRQK+RVK +KE N+ +FH + ++ + I E++ E + L + IK+ +
Sbjct: 1095 LREEIHWRQKARVKWVKEGDCNSKFFHKVANGRRNRKFIKELENESGLMLNNPESIKEEI 1154
Query: 313 VKYYEEKFALRSTQVNDQLLNLVSKVITEEDNFMLCAIPLEVEIQKVVFSMKSESSPGPD 134
+KY+E+ +A S + + ++ L I E L + E EI K +F M + +PGPD
Sbjct: 1155 LKYFEKLYACPSRE-SWRVEGLDWSPIDGESASRLESPFTEEEIYKAIFQMDRDKAPGPD 1213
Query: 133 GFQGCFYHACWNIIKDDLCSAVTSFFREAYIPMGVNNNFLALIP 2
GF + CW++IK+DL F R I N +F+ L+P
Sbjct: 1214 GFTIAVFQDCWDVIKEDLVRVFAEFHRSGIINQSTNASFIVLLP 1257
>gb|ABA91475.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 994
Score = 152 bits (385), Expect = 1e-34
Identities = 101/349 (28%), Positives = 172/349 (49%), Gaps = 11/349 (3%)
Frame = -3
Query: 1015 LINMCHLQESSFKGLKFSWCNNQKGRNRVLSKIDRALFNQACE-KFNGWSYKVKHRLFSD 839
+I+ +L+E G F+W N+ + N+ K+DR L + E KF + + R SD
Sbjct: 107 VIDTLNLRELESSGRSFTWANHLQ--NQTFEKLDRILVSTEFETKFPLSTVSILAREISD 164
Query: 838 HAPLLGRHYHIPRPQNVPFRFNKVWLSHDTFQSLVAESWREVLL-GTPILKFTQKLKRLK 662
H PLL F+F WL D F +V E W+ V + GTP+ ++ +K++RL+
Sbjct: 165 HTPLLYNSGGASAAYQPQFKFELGWLRRDGFSDIVKEVWQGVSIEGTPLERWQRKIRRLR 224
Query: 661 GVIKRWNVNVFGNLDNRIRKLQAEFDALQTRGDEDLEDHVLAELVETKELQLQNALSNRA 482
++ W N+ G ++L + D L + + + + + +L L
Sbjct: 225 QFLRGWAKNITGAYKKEKKELLDKLDTLDKKAEHTILNEFELNVKHVLNDRLAELLREEE 284
Query: 481 ALWRQKSRVKDIKEDSRNTAYFHTMCKIKQEKHMIVEMQTEENVQLTSQGEIKDYMVKYY 302
W Q+++VK + E NT Y+H + + K I ++Q + N +T ++K+++ KY+
Sbjct: 285 IKWYQRAKVKHLLEGDANTKYYHLLANGRHRKTRIFQLQ-DGNEVITGDAQLKEHITKYF 343
Query: 301 EEKFA--------LRSTQVNDQLLNLVSKVITEEDNFMLCAIPLEVEIQKVVFSMKSESS 146
+ F L +QV+D + ++ E+N L A E EI+ +F MK ++
Sbjct: 344 KTLFGPSQTSSIFLDESQVDD------IRQVSAEENESLTADFTEEEIKCAIFQMKHNTA 397
Query: 145 PGPDGFQGCFYHACWNIIKDDLCSAVTSFFREAYIPM-GVNNNFLALIP 2
PGPDGF FY A W IIKDDL A+ S F++ +P+ +N + L+P
Sbjct: 398 PGPDGFPPEFYQAFWTIIKDDLL-ALFSDFQQGSLPLNSLNFGTIILLP 445