BLASTX nr result

ID: Coptis21_contig00014667 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014667
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276167.1| PREDICTED: uncharacterized protein LOC100244...   291   2e-76
ref|XP_002534177.1| conserved hypothetical protein [Ricinus comm...   274   3e-71
ref|XP_002309102.1| predicted protein [Populus trichocarpa] gi|2...   260   3e-67
ref|XP_002882610.1| DNA binding protein [Arabidopsis lyrata subs...   249   7e-64
ref|NP_001048348.1| Os02g0788500 [Oryza sativa Japonica Group] g...   245   1e-62

>ref|XP_002276167.1| PREDICTED: uncharacterized protein LOC100244272 [Vitis vinifera]
           gi|297740278|emb|CBI30460.3| unnamed protein product
           [Vitis vinifera]
          Length = 278

 Score =  291 bits (744), Expect = 2e-76
 Identities = 140/197 (71%), Positives = 168/197 (85%)
 Frame = +3

Query: 228 KFGKSTLHSKVSHRDLFRVCRVKSEDFDGNLSREGTILDEQTLERDLQIAIDEENYAQAA 407
           + G +TL  + S+    R C+VKSED +G LS E  +LDEQ+L RDLQIAI+EENYAQAA
Sbjct: 83  QIGTATLLGQTSNLFSVRPCQVKSEDSEGTLSGESILLDEQSLMRDLQIAIEEENYAQAA 142

Query: 408 KIRDSLRFLQEDSKASVLAANARFYNCFRKGDLTGMQALWAKRDNVCCVHPGVSGISGYD 587
           KIRDSLR L EDSKASVLAANARFYN FRKGDL  MQALWAK +NVC VHPG++GISGYD
Sbjct: 143 KIRDSLRLLHEDSKASVLAANARFYNSFRKGDLAAMQALWAKGENVCVVHPGLTGISGYD 202

Query: 588 LVMGSWDFVCAEYDFPLEIEVTDVEVYVKGDIGYVTCIEVVKTKGNSDWGKQFATNVFEK 767
           LVMGSW+ V A+Y+FPL+IE+ D++V+V+GD+GYVTC+E+VKTKG S WGKQFA NVFE+
Sbjct: 203 LVMGSWEIVWADYEFPLQIELKDIQVHVRGDMGYVTCVELVKTKGRS-WGKQFAINVFER 261

Query: 768 INGQWFICIHHASYVEL 818
           I+GQWFICIHHAS+V+L
Sbjct: 262 IDGQWFICIHHASHVDL 278


>ref|XP_002534177.1| conserved hypothetical protein [Ricinus communis]
           gi|223525737|gb|EEF28201.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 190

 Score =  274 bits (700), Expect = 3e-71
 Identities = 135/189 (71%), Positives = 151/189 (79%)
 Frame = +3

Query: 252 SKVSHRDLFRVCRVKSEDFDGNLSREGTILDEQTLERDLQIAIDEENYAQAAKIRDSLRF 431
           +K S     R C+VKSED +  LS E  ILDEQ L RDLQIAI+EENYAQAAKIRDSLR 
Sbjct: 3   AKASRLLSIRACQVKSEDSEEMLSGESIILDEQALTRDLQIAIEEENYAQAAKIRDSLRL 62

Query: 432 LQEDSKASVLAANARFYNCFRKGDLTGMQALWAKRDNVCCVHPGVSGISGYDLVMGSWDF 611
           LQEDSKASVLAANARFYN FR GDL  MQALWAK DNVCCVHPG SG+ GYD VM SW+ 
Sbjct: 63  LQEDSKASVLAANARFYNAFRNGDLASMQALWAKGDNVCCVHPGASGVIGYDDVMESWEL 122

Query: 612 VCAEYDFPLEIEVTDVEVYVKGDIGYVTCIEVVKTKGNSDWGKQFATNVFEKINGQWFIC 791
           V   YDFPLEIE+ +  V+ KGD+GYVTC+E V+TKG+S WG QF TNVFE+I+GQWFIC
Sbjct: 123 VWMNYDFPLEIELKNARVHFKGDVGYVTCVEFVRTKGSS-WGAQFVTNVFERIDGQWFIC 181

Query: 792 IHHASYVEL 818
           IHHAS V+L
Sbjct: 182 IHHASPVDL 190


>ref|XP_002309102.1| predicted protein [Populus trichocarpa] gi|222855078|gb|EEE92625.1|
           predicted protein [Populus trichocarpa]
          Length = 180

 Score =  260 bits (665), Expect = 3e-67
 Identities = 125/180 (69%), Positives = 146/180 (81%)
 Frame = +3

Query: 279 RVCRVKSEDFDGNLSREGTILDEQTLERDLQIAIDEENYAQAAKIRDSLRFLQEDSKASV 458
           R C+V+SED +   S E  +LDEQTL R+LQ+AI+EENY QAAKIRDSL+ LQEDSKASV
Sbjct: 2   RACQVRSEDSEEVSSGESIVLDEQTLMRELQVAIEEENYTQAAKIRDSLKVLQEDSKASV 61

Query: 459 LAANARFYNCFRKGDLTGMQALWAKRDNVCCVHPGVSGISGYDLVMGSWDFVCAEYDFPL 638
           LAANARFYN FRKGDL  MQ+LW K DNVCCVHPG SG+ GYD VM SW+ V   YDFPL
Sbjct: 62  LAANARFYNAFRKGDLAAMQSLWEKADNVCCVHPGASGVLGYDDVMESWEVVWMNYDFPL 121

Query: 639 EIEVTDVEVYVKGDIGYVTCIEVVKTKGNSDWGKQFATNVFEKINGQWFICIHHASYVEL 818
           +IE+ +V V+ +GD+GYVTC+E V+TKG S WG QF TNVFEKI+GQWFI IHHAS V+L
Sbjct: 122 DIELKNVRVHFRGDVGYVTCVEFVRTKGRS-WGAQFVTNVFEKIDGQWFISIHHASPVDL 180


>ref|XP_002882610.1| DNA binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328450|gb|EFH58869.1| DNA binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 244

 Score =  249 bits (636), Expect = 7e-64
 Identities = 116/193 (60%), Positives = 149/193 (77%), Gaps = 3/193 (1%)
 Frame = +3

Query: 249 HSKVSHRD---LFRVCRVKSEDFDGNLSREGTILDEQTLERDLQIAIDEENYAQAAKIRD 419
           H K+ +++    FR CRVK ED +     +   +DE TL++DL+ AI EENY +AAKIRD
Sbjct: 52  HLKLQNKEPCSRFRPCRVKREDNNQTADVKSISVDETTLKQDLETAIQEENYVEAAKIRD 111

Query: 420 SLRFLQEDSKASVLAANARFYNCFRKGDLTGMQALWAKRDNVCCVHPGVSGISGYDLVMG 599
            L+ LQED+KASVL+AN+RFY  FR GDL  MQ+LW+K  N CCVHPG  GI+GYD VM 
Sbjct: 112 KLKELQEDNKASVLSANSRFYQSFRNGDLAAMQSLWSKSGNPCCVHPGAKGITGYDYVME 171

Query: 600 SWDFVCAEYDFPLEIEVTDVEVYVKGDIGYVTCIEVVKTKGNSDWGKQFATNVFEKINGQ 779
           SW+FV   Y+FPL+IE+ DVEV+V+G++GYVTC+E VKTKG+S WG QF +NVFE+I+GQ
Sbjct: 172 SWEFVWMNYEFPLQIELKDVEVHVRGEVGYVTCMEFVKTKGSSSWGAQFVSNVFERIDGQ 231

Query: 780 WFICIHHASYVEL 818
           WFICIHHAS V++
Sbjct: 232 WFICIHHASPVDI 244


>ref|NP_001048348.1| Os02g0788500 [Oryza sativa Japonica Group]
           gi|113537879|dbj|BAF10262.1| Os02g0788500 [Oryza sativa
           Japonica Group] gi|215692516|dbj|BAG87936.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215737625|dbj|BAG96755.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218191718|gb|EEC74145.1| hypothetical protein
           OsI_09224 [Oryza sativa Indica Group]
           gi|222623813|gb|EEE57945.1| hypothetical protein
           OsJ_08664 [Oryza sativa Japonica Group]
          Length = 240

 Score =  245 bits (626), Expect = 1e-62
 Identities = 114/180 (63%), Positives = 145/180 (80%), Gaps = 1/180 (0%)
 Frame = +3

Query: 279 RVCRVKSEDFDGNLSREGTILDEQTLERDLQIAIDEENYAQAAKIRDSLRFLQEDSKASV 458
           R   VKS + +G+ S E    DE+TL+RDLQ AI EENYAQAAK+RD LR LQEDS+++V
Sbjct: 60  RTVHVKSGEAEGSPSTESITRDEETLQRDLQTAIQEENYAQAAKLRDELRVLQEDSRSAV 119

Query: 459 LAANARFYNCFRKGDLTGMQALWAKRDNVCCVHPGVSGISGYDLVMGSWDFVC-AEYDFP 635
           LAANARFYN F+ GDL  M + WAK D+V  VHP    ISGYD+VM SW+ VC A+Y+FP
Sbjct: 120 LAANARFYNAFKNGDLVAMHSAWAKGDHVYVVHPSAGRISGYDMVMQSWEMVCDADYEFP 179

Query: 636 LEIEVTDVEVYVKGDIGYVTCIEVVKTKGNSDWGKQFATNVFEKINGQWFICIHHASYVE 815
           L+I++ DVEV+V+GD+GYVTC+E+VKTKG+S WG+Q ATNVFEK++G+WFICIHHAS+ +
Sbjct: 180 LQIDLQDVEVHVRGDLGYVTCLELVKTKGSSSWGRQVATNVFEKVDGKWFICIHHASHFD 239


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