BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014658
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517382.1| small nuclear ribonucleoprotein f, putative ...    62   5e-08
ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo...    62   6e-08
ref|XP_002325051.1| predicted protein [Populus trichocarpa] gi|2...    60   1e-07
ref|XP_004146017.1| PREDICTED: LOW QUALITY PROTEIN: probable sma...    60   2e-07
ref|XP_002530746.1| small nuclear ribonucleoprotein f, putative ...    60   2e-07

>ref|XP_002517382.1| small nuclear ribonucleoprotein f, putative [Ricinus communis]
           gi|223543393|gb|EEF44924.1| small nuclear
           ribonucleoprotein f, putative [Ricinus communis]
          Length = 62

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -3

Query: 334 KFTGSLGEILIRCNNVLYLRGVPEHEDIEEAD 239
           +FTG+LGEILIRCNNVLYLRGVPE EDIE+AD
Sbjct: 29  QFTGNLGEILIRCNNVLYLRGVPEDEDIEDAD 60


>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
           vinifera] gi|296083390|emb|CBI23345.3| unnamed protein
           product [Vitis vinifera]
          Length = 88

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/32 (87%), Positives = 31/32 (96%)
 Frame = -3

Query: 334 KFTGSLGEILIRCNNVLYLRGVPEHEDIEEAD 239
           +FTG+LGEILIRCNNVLYLRGVPE E+IEEAD
Sbjct: 55  QFTGNLGEILIRCNNVLYLRGVPEDEEIEEAD 86


>ref|XP_002325051.1| predicted protein [Populus trichocarpa] gi|222866485|gb|EEF03616.1|
           predicted protein [Populus trichocarpa]
          Length = 88

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = -3

Query: 334 KFTGSLGEILIRCNNVLYLRGVPEHEDIEEAD 239
           +FTG+LGEILIRCNNVLYLRGVPE EDIE+A+
Sbjct: 55  QFTGNLGEILIRCNNVLYLRGVPEDEDIEDAE 86


>ref|XP_004146017.1| PREDICTED: LOW QUALITY PROTEIN: probable small nuclear
           ribonucleoprotein F-like [Cucumis sativus]
           gi|449503654|ref|XP_004162110.1| PREDICTED: LOW QUALITY
           PROTEIN: probable small nuclear ribonucleoprotein F-like
           [Cucumis sativus]
          Length = 88

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = -3

Query: 334 KFTGSLGEILIRCNNVLYLRGVPEHEDIEEAD 239
           +FTGSLGEILIRCNNVLYLRGVPE E+IE+A+
Sbjct: 55  QFTGSLGEILIRCNNVLYLRGVPEDEEIEDAE 86


>ref|XP_002530746.1| small nuclear ribonucleoprotein f, putative [Ricinus communis]
           gi|223529710|gb|EEF31652.1| small nuclear
           ribonucleoprotein f, putative [Ricinus communis]
          Length = 88

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/32 (81%), Positives = 31/32 (96%)
 Frame = -3

Query: 334 KFTGSLGEILIRCNNVLYLRGVPEHEDIEEAD 239
           +FTG+LGEILIRCNNVLYLRGVPE E++E+AD
Sbjct: 55  QFTGNLGEILIRCNNVLYLRGVPEDEELEDAD 86