BLASTX nr result
ID: Coptis21_contig00014655
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00014655 (248 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002298275.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 ref|XP_002313486.1| predicted protein [Populus trichocarpa] gi|2... 59 3e-07 ref|XP_002272164.1| PREDICTED: uncharacterized protein LOC100258... 54 1e-05 >ref|XP_002298275.1| predicted protein [Populus trichocarpa] gi|222845533|gb|EEE83080.1| predicted protein [Populus trichocarpa] Length = 248 Score = 60.1 bits (144), Expect = 2e-07 Identities = 30/81 (37%), Positives = 40/81 (49%) Frame = +3 Query: 3 TQPNPQRAAFFRRVLIIFVSICIIFGALSLILWLVLRPHVPEFQIXXXXXXXXXXXXXXX 182 T PN QRA F RR++I + IF + I WLV+RPH PEF++ Sbjct: 52 TYPN-QRAIFLRRLIIALIIFTGIFFTILFICWLVIRPHFPEFRVTSLSISNFNVSSSSS 110 Query: 183 XXXGNWDIEFIAKNPNKKLNV 245 G W+ F NPNKK+ + Sbjct: 111 SVTGTWNARFQVSNPNKKMKI 131 >ref|XP_002313486.1| predicted protein [Populus trichocarpa] gi|222849894|gb|EEE87441.1| predicted protein [Populus trichocarpa] Length = 246 Score = 59.3 bits (142), Expect = 3e-07 Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 1/77 (1%) Frame = +3 Query: 6 QPNP-QRAAFFRRVLIIFVSICIIFGALSLILWLVLRPHVPEFQIXXXXXXXXXXXXXXX 182 QP P QRA RR++ + + +IF + I+WLV+RPH+PEF++ Sbjct: 50 QPYPNQRATLLRRLIAALIIVTVIFFTILFIVWLVIRPHLPEFRVTSLSVSSFNASSSSS 109 Query: 183 XXXGNWDIEFIAKNPNK 233 GNW+ F NPNK Sbjct: 110 SVSGNWNARFQVYNPNK 126 >ref|XP_002272164.1| PREDICTED: uncharacterized protein LOC100258714 [Vitis vinifera] Length = 239 Score = 54.3 bits (129), Expect = 1e-05 Identities = 27/75 (36%), Positives = 38/75 (50%) Frame = +3 Query: 21 RAAFFRRVLIIFVSICIIFGALSLILWLVLRPHVPEFQIXXXXXXXXXXXXXXXXXXGNW 200 RA F RR L ++ II G + I+WLVLRP +P F + G W Sbjct: 53 RATFLRRFLAAMIAFFIIVGTIIFIVWLVLRPRLPYFSV--ASASLSSFNVSASQLSGEW 110 Query: 201 DIEFIAKNPNKKLNV 245 +I F +NPNKK+++ Sbjct: 111 NISFDVRNPNKKISI 125