BLASTX nr result

ID: Coptis21_contig00014651 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014651
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68638.1| hypothetical protein VITISV_030805 [Vitis vinifera]    62   4e-08
ref|XP_002264543.1| PREDICTED: uncharacterized protein LOC100258...    60   1e-07
emb|CBI23957.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_002305590.1| predicted protein [Populus trichocarpa] gi|1...    56   4e-06

>emb|CAN68638.1| hypothetical protein VITISV_030805 [Vitis vinifera]
          Length = 194

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 39/73 (53%), Positives = 51/73 (69%), Gaps = 3/73 (4%)
 Frame = -1

Query: 212 MMYK-TCTKQLTNLHEKMVTTSTPVEIGTRGTVGSLVLQEIEHFSNLALDR--NETSQVS 42
           M YK +CT   T   E+M   + PVE+GTRGTVGSLV++EIE+FS L LDR  + +SQ S
Sbjct: 1   MEYKASCTA--TKCPERMAAKA-PVEVGTRGTVGSLVMKEIEYFSRLELDRHGSGSSQRS 57

Query: 41  RAQIADIASTSRG 3
           +A + D+AS S G
Sbjct: 58  QAHVVDVASGSTG 70


>ref|XP_002264543.1| PREDICTED: uncharacterized protein LOC100258941 [Vitis vinifera]
           gi|302144086|emb|CBI23191.3| unnamed protein product
           [Vitis vinifera]
          Length = 115

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
 Frame = -1

Query: 161 VTTSTPVEIGTRGTVGSLVLQEIEHFSNLALDR--NETSQVSRAQIADIASTSRG 3
           +    PVE+GTRGTVGSLV++EIE+FS L LDR  + +SQ S+A + D+AS S G
Sbjct: 1   MAAKAPVEVGTRGTVGSLVMKEIEYFSRLELDRHGSGSSQRSQAHVVDVASGSTG 55


>emb|CBI23957.3| unnamed protein product [Vitis vinifera]
          Length = 75

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/45 (60%), Positives = 35/45 (77%)
 Frame = -1

Query: 146 PVEIGTRGTVGSLVLQEIEHFSNLALDRNETSQVSRAQIADIAST 12
           PVEIGTRGTVGSL++QEIE+FS L + R + SQ  + +IAD  S+
Sbjct: 6   PVEIGTRGTVGSLIMQEIEYFSRLEIGRKDCSQKPQCKIADAISS 50


>ref|XP_002305590.1| predicted protein [Populus trichocarpa] gi|118482524|gb|ABK93184.1|
           unknown [Populus trichocarpa]
           gi|222848554|gb|EEE86101.1| predicted protein [Populus
           trichocarpa]
          Length = 112

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 27/51 (52%), Positives = 38/51 (74%)
 Frame = -1

Query: 161 VTTSTPVEIGTRGTVGSLVLQEIEHFSNLALDRNETSQVSRAQIADIASTS 9
           +  + PV IGTRGTVGSLV +EIE+FS   +DR  +S+  + Q+ADIAS++
Sbjct: 1   MAATAPVAIGTRGTVGSLVRKEIEYFSKFEIDRCASSRKPQEQVADIASSN 51


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