BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014639
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vit...   184   1e-44
emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera]   178   8e-43
ref|XP_002887637.1| hypothetical protein ARALYDRAFT_316562 [Arab...   170   2e-40
ref|XP_002301903.1| predicted protein [Populus trichocarpa] gi|2...   170   2e-40
gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis th...   169   4e-40

>ref|XP_002274304.1| PREDICTED: RING-H2 finger protein ATL80 [Vitis vinifera]
          Length = 184

 Score =  184 bits (467), Expect = 1e-44
 Identities = 102/189 (53%), Positives = 118/189 (62%), Gaps = 6/189 (3%)
 Frame = -3

Query: 597 MSAPSRFLTGDNXXXXXXXXXXPLAVDSDFXXXXXXXXXXXXXXXXXXXXARCAWLRRYT 418
           M+ PSRFL G N            AVDSDF                    ARCAWLRR +
Sbjct: 1   MTHPSRFLGGVNSSATASQESA--AVDSDFVVILAALLCALICVLGLVAVARCAWLRRIS 58

Query: 417 GDALR---SQLHVSANKGLKKKILRSIPRLTFNGNGEEVNGKLVDCAICLTEFADGDEIR 247
           G A     S     ANKGLKKKILRS+P++T+     E  G L DCAICLTEF  GDEIR
Sbjct: 59  GAANLPGGSAPQTPANKGLKKKILRSLPKVTY---AAETAGNLTDCAICLTEFVGGDEIR 115

Query: 246 VLPQCGHGFHVGCIDMWLGSHSSCPSCRRVLVFKRCKKCGGVPETSASS---SRAVIEAR 76
           VLPQCGHGFHVGCID WLGSH SCPSCR++LV  RC+KCGGVP +S+S+   + + ++ R
Sbjct: 116 VLPQCGHGFHVGCIDTWLGSHCSCPSCRQILVVARCQKCGGVPASSSSTGAETESRLKER 175

Query: 75  EDHVNSFLP 49
           ED VN FLP
Sbjct: 176 EDDVNRFLP 184


>emb|CAN59779.1| hypothetical protein VITISV_024654 [Vitis vinifera]
          Length = 312

 Score =  178 bits (451), Expect = 8e-43
 Identities = 99/185 (53%), Positives = 115/185 (62%), Gaps = 6/185 (3%)
 Frame = -3

Query: 597 MSAPSRFLTGDNXXXXXXXXXXPLAVDSDFXXXXXXXXXXXXXXXXXXXXARCAWLRRYT 418
           M+ PSRFL G N            AVDSDF                    ARCAWLRR +
Sbjct: 1   MTHPSRFLGGVNSSATASQESA--AVDSDFVVILAALLCALICVLGLVAVARCAWLRRIS 58

Query: 417 GDALR---SQLHVSANKGLKKKILRSIPRLTFNGNGEEVNGKLVDCAICLTEFADGDEIR 247
           G A     S     ANKGLKKKILRS+P++T+     E  G L DCAICLTEF  GDEIR
Sbjct: 59  GAANLPGGSAPQTPANKGLKKKILRSLPKVTY---AAETAGNLTDCAICLTEFVGGDEIR 115

Query: 246 VLPQCGHGFHVGCIDMWLGSHSSCPSCRRVLVFKRCKKCGGVPETSASS---SRAVIEAR 76
           VLPQCGHGFHVGCID WLGSH SCPSCR++LV  RC+KCGGVP +S+S+   + + ++ R
Sbjct: 116 VLPQCGHGFHVGCIDTWLGSHCSCPSCRQILVVARCQKCGGVPASSSSTGAETESRLKER 175

Query: 75  EDHVN 61
           ED VN
Sbjct: 176 EDDVN 180


>ref|XP_002887637.1| hypothetical protein ARALYDRAFT_316562 [Arabidopsis lyrata subsp.
           lyrata] gi|297333478|gb|EFH63896.1| hypothetical protein
           ARALYDRAFT_316562 [Arabidopsis lyrata subsp. lyrata]
          Length = 186

 Score =  170 bits (430), Expect = 2e-40
 Identities = 84/138 (60%), Positives = 99/138 (71%), Gaps = 6/138 (4%)
 Frame = -3

Query: 444 RCAWLRRYTGDALRSQLH----VSANKGLKKKILRSIPRLTFNGNGEEVNGKLVDCAICL 277
           RCAWLRR        Q H     +ANKGLKKK+LRS+P+LT++ +      KLV+CAICL
Sbjct: 50  RCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAE-KLVECAICL 108

Query: 276 TEFADGDEIRVLPQCGHGFHVGCIDMWLGSHSSCPSCRRVLVFKRCKKCGGVPETSASSS 97
           TEFA GDE+RVLPQCGHGFHV CID WLGSHSSCPSCR++LV  RC KCGG+P +S S S
Sbjct: 109 TEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVARCHKCGGLPGSSTSGS 168

Query: 96  R--AVIEAREDHVNSFLP 49
                I+ RED   +FLP
Sbjct: 169 EPDTRIKQREDDPANFLP 186


>ref|XP_002301903.1| predicted protein [Populus trichocarpa] gi|222843629|gb|EEE81176.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  170 bits (430), Expect = 2e-40
 Identities = 91/175 (52%), Positives = 109/175 (62%), Gaps = 17/175 (9%)
 Frame = -3

Query: 522 VDSDFXXXXXXXXXXXXXXXXXXXXARCAWLRRYTGDALRSQLHVS----ANKGLKKKIL 355
           VDSDF                    ARCAWLRR++       +       ANKGLKKK+L
Sbjct: 29  VDSDFMVILAALLCALICVLGLIAVARCAWLRRFSSRNPTPPVPPPPPSVANKGLKKKVL 88

Query: 354 RSIPRLTFNGNGEEVNGKLVDCAICLTEFADGDEIRVLPQCGHGFHVGCIDMWLGSHSSC 175
           RS+P+ TF+   E+ +GKL DCAICLTEF+ GDEIRVLPQCGHGFHV CID WLGSHSSC
Sbjct: 89  RSLPKQTFS---EDFSGKLPDCAICLTEFSAGDEIRVLPQCGHGFHVSCIDTWLGSHSSC 145

Query: 174 PSCRRVLVFKRCKKCGGVPETSASS-------------SRAVIEAREDHVNSFLP 49
           PSCR++LV  RC+KCGG+P  S+SS             + A ++ RED  N FLP
Sbjct: 146 PSCRQILVVARCQKCGGLPSGSSSSNGGGGGGGGAETETEASLKEREDGANRFLP 200


>gb|AAM63811.1| putative RING zinc finger protein [Arabidopsis thaliana]
          Length = 186

 Score =  169 bits (428), Expect = 4e-40
 Identities = 83/138 (60%), Positives = 100/138 (72%), Gaps = 6/138 (4%)
 Frame = -3

Query: 444 RCAWLRRYTGDALRSQLH----VSANKGLKKKILRSIPRLTFNGNGEEVNGKLVDCAICL 277
           RCAWLRR        Q H     +ANKGLKKK+LRS+P+LT++ +      KLV+CAICL
Sbjct: 50  RCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAE-KLVECAICL 108

Query: 276 TEFADGDEIRVLPQCGHGFHVGCIDMWLGSHSSCPSCRRVLVFKRCKKCGGVPETSASSS 97
           TEFA GDE+RVLPQCGHGFHV CID WLGSHSSCPSCR++LV  RC KCGG+P +S+S  
Sbjct: 109 TEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGP 168

Query: 96  R--AVIEAREDHVNSFLP 49
                I+ RED  ++FLP
Sbjct: 169 EPDTRIKQREDGPDNFLP 186