BLASTX nr result

ID: Coptis21_contig00014632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014632
         (1376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635410.1| PREDICTED: LOW QUALITY PROTEIN: patatin grou...   254   4e-65
ref|XP_002301194.1| predicted protein [Populus trichocarpa] gi|2...   252   1e-64
gb|AAF98369.1|AF158253_1 patatin-like protein 3 [Nicotiana tabacum]   252   2e-64
ref|XP_002445638.1| hypothetical protein SORBIDRAFT_07g023200 [S...   249   1e-63
ref|NP_001062043.1| Os08g0477100 [Oryza sativa Japonica Group] g...   248   2e-63

>ref|XP_003635410.1| PREDICTED: LOW QUALITY PROTEIN: patatin group A-3-like [Vitis
           vinifera]
          Length = 388

 Score =  254 bits (649), Expect = 4e-65
 Identities = 122/205 (59%), Positives = 155/205 (75%), Gaps = 7/205 (3%)
 Frame = +1

Query: 166 GKMVTVLSXXXXXXXXXXXXTMLAFLESKLQVLDGPDVRLVDYFDIVAGTSTGGLVATML 345
           G+MVTVLS            T+LAFLESKLQ LDG + R+ DYFDI+AGTSTGGLV +ML
Sbjct: 8   GRMVTVLSIDGGGIRGIIPGTLLAFLESKLQELDGANARIADYFDIIAGTSTGGLVTSML 67

Query: 346 TAPNNDNRPLYAAKDINDFYVEQAPLIFPQNEIS-------TTGPKYDGKYLKTLLQNML 504
           TAPN DNRP+YAAKDIN+FY+E  P IFPQN  +        TGPKYDGKYL++L   +L
Sbjct: 68  TAPNKDNRPIYAAKDINNFYLEHCPKIFPQNSTNPNTSVSGATGPKYDGKYLRSLTDELL 127

Query: 505 GNSSIDQYLTNVIIPAFDVKYIQPTIFTNLKANFDVSRNTKLSDICLGTSAAPTYLPGHY 684
           G+ ++ Q LTNV+IP FD+K +QP IF+   A  +V++N +LSDIC+GTSAAPTYLP HY
Sbjct: 128 GDLTLKQTLTNVVIPTFDIKLLQPIIFSTKDARTNVAKNARLSDICIGTSAAPTYLPAHY 187

Query: 685 FETKDSNGDIQTFNLVDGGVAASNP 759
           FET+D++G  ++F+L+DGG AA+NP
Sbjct: 188 FETRDASGKTRSFDLIDGGXAANNP 212


>ref|XP_002301194.1| predicted protein [Populus trichocarpa] gi|222842920|gb|EEE80467.1|
           predicted protein [Populus trichocarpa]
          Length = 405

 Score =  252 bits (644), Expect = 1e-64
 Identities = 123/212 (58%), Positives = 154/212 (72%), Gaps = 10/212 (4%)
 Frame = +1

Query: 154 PPSAGKMVTVLSXXXXXXXXXXXXTMLAFLESKLQVLDGPDVRLVDYFDIVAGTSTGGLV 333
           PP+ G ++TVLS            T+LAFLES+LQ LDG D RL DYFD+++GTSTGGLV
Sbjct: 10  PPTYGNLITVLSIDGGGIRGIIPGTILAFLESELQKLDGEDARLADYFDVISGTSTGGLV 69

Query: 334 ATMLTAPNNDNRPLYAAKDINDFYVEQAPLIFPQNEI----------STTGPKYDGKYLK 483
             MLTAPN  NRPL+AAKDINDFY++ +P IFPQ+            + +GPKYDGKYL 
Sbjct: 70  TAMLTAPNEQNRPLFAAKDINDFYLKHSPRIFPQDGSPFAAAGNLIKAFSGPKYDGKYLH 129

Query: 484 TLLQNMLGNSSIDQYLTNVIIPAFDVKYIQPTIFTNLKANFDVSRNTKLSDICLGTSAAP 663
           ++++  LG   + Q LTNV+IP FD+KY+QPTIF++ +   D S +  LSDIC+GTSAAP
Sbjct: 130 SIVKEKLGEKRLHQTLTNVVIPTFDIKYLQPTIFSSYQVKNDPSTDALLSDICIGTSAAP 189

Query: 664 TYLPGHYFETKDSNGDIQTFNLVDGGVAASNP 759
           TYLP HYFETKDS G ++ FNLVDGGVAA+NP
Sbjct: 190 TYLPAHYFETKDSEGKVRGFNLVDGGVAANNP 221


>gb|AAF98369.1|AF158253_1 patatin-like protein 3 [Nicotiana tabacum]
          Length = 411

 Score =  252 bits (643), Expect = 2e-64
 Identities = 127/216 (58%), Positives = 157/216 (72%), Gaps = 14/216 (6%)
 Frame = +1

Query: 154 PPSA-----GKMVTVLSXXXXXXXXXXXXTMLAFLESKLQVLDGPDVRLVDYFDIVAGTS 318
           PP A     GKMVTVLS            T+LAFLESKLQ LDGP+ RL DYFD+VAGTS
Sbjct: 21  PPMAFAVTKGKMVTVLSVDGGGIRGIIPGTVLAFLESKLQELDGPNARLADYFDVVAGTS 80

Query: 319 TGGLVATMLTAPNNDNRPLYAAKDINDFYVEQAPLIFPQNEISTT---------GPKYDG 471
           TGGL+ TMLTAPN DNRPLY AKDI++FY+E  P IFPQ+  ++          GPKYDG
Sbjct: 81  TGGLITTMLTAPNKDNRPLYQAKDISNFYMEHGPQIFPQSRRNSFVRRVTNLFGGPKYDG 140

Query: 472 KYLKTLLQNMLGNSSIDQYLTNVIIPAFDVKYIQPTIFTNLKANFDVSRNTKLSDICLGT 651
           KYL++++ ++LGN ++ Q LTN IIP FD+K +QP IF+   A  ++S+N +LSDICL T
Sbjct: 141 KYLRSIINSILGNLTMKQTLTNTIIPTFDIKRLQPIIFSTADAKANISKNAQLSDICLST 200

Query: 652 SAAPTYLPGHYFETKDSNGDIQTFNLVDGGVAASNP 759
           SAAPTY P HYFETKD+ G  +TF+LVDGG+AA+NP
Sbjct: 201 SAAPTYFPVHYFETKDAEGKTRTFDLVDGGLAANNP 236


>ref|XP_002445638.1| hypothetical protein SORBIDRAFT_07g023200 [Sorghum bicolor]
           gi|241941988|gb|EES15133.1| hypothetical protein
           SORBIDRAFT_07g023200 [Sorghum bicolor]
          Length = 438

 Score =  249 bits (636), Expect = 1e-63
 Identities = 119/212 (56%), Positives = 149/212 (70%), Gaps = 8/212 (3%)
 Frame = +1

Query: 148 NPPPSAGKMVTVLSXXXXXXXXXXXXTMLAFLESKLQVLDGPDVRLVDYFDIVAGTSTGG 327
           +PPP+ G +VTVLS            T+L FLE KLQ LDGPD RL DYFD++AGTSTGG
Sbjct: 43  SPPPAYGSIVTVLSIDGGGVRGIIPGTILGFLEEKLQELDGPDARLADYFDVIAGTSTGG 102

Query: 328 LVATMLTAPNNDNRPLYAAKDINDFYVEQAPLIFPQNEI--------STTGPKYDGKYLK 483
           LV  MLTAPN D RPL+AAKDINDFY+E  P IFP            S  GPKYDGKYL 
Sbjct: 103 LVTAMLTAPNKDGRPLFAAKDINDFYLEHCPKIFPSGSSGGPLGLFKSMAGPKYDGKYLH 162

Query: 484 TLLQNMLGNSSIDQYLTNVIIPAFDVKYIQPTIFTNLKANFDVSRNTKLSDICLGTSAAP 663
           ++++ +LG + + Q L N++IP FD+K +QPT+F+   A  DVS++  LSD+C+ TSAAP
Sbjct: 163 SIVRELLGETRVSQALQNIVIPTFDIKLLQPTVFSRYDAMSDVSKDALLSDVCISTSAAP 222

Query: 664 TYLPGHYFETKDSNGDIQTFNLVDGGVAASNP 759
           TYLPGH F+T D +G  + FNL+DGGVAA+NP
Sbjct: 223 TYLPGHQFQTTDKDGKPRAFNLIDGGVAANNP 254


>ref|NP_001062043.1| Os08g0477100 [Oryza sativa Japonica Group]
           gi|42408066|dbj|BAD09208.1| putative latex protein
           allergen [Oryza sativa Japonica Group]
           gi|113624012|dbj|BAF23957.1| Os08g0477100 [Oryza sativa
           Japonica Group] gi|125603755|gb|EAZ43080.1| hypothetical
           protein OsJ_27670 [Oryza sativa Japonica Group]
           gi|215766260|dbj|BAG98488.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 431

 Score =  248 bits (634), Expect = 2e-63
 Identities = 120/211 (56%), Positives = 151/211 (71%), Gaps = 7/211 (3%)
 Frame = +1

Query: 148 NPPPSAGKMVTVLSXXXXXXXXXXXXTMLAFLESKLQVLDGPDVRLVDYFDIVAGTSTGG 327
           +PPPS G +VTVLS            T+LA LE KLQ LDG D R+ DYFD++AGTSTGG
Sbjct: 40  SPPPSYGSIVTVLSIDGGGVRGIIPGTILASLEEKLQKLDGADARIADYFDVIAGTSTGG 99

Query: 328 LVATMLTAPNNDNRPLYAAKDINDFYVEQAPLIFPQNEI-------STTGPKYDGKYLKT 486
           LV  MLTAPN+  RPL+AAKDINDFY++  P IFP   I       S  GPKYDGKYL +
Sbjct: 100 LVTAMLTAPNDQGRPLFAAKDINDFYLKHCPKIFPPRSIPIVGLFQSMAGPKYDGKYLHS 159

Query: 487 LLQNMLGNSSIDQYLTNVIIPAFDVKYIQPTIFTNLKANFDVSRNTKLSDICLGTSAAPT 666
           ++Q++LG+  +++ +TNV+IP FD+K +QP  F+   A  DVS+N  LSD+C+ TSAAPT
Sbjct: 160 VVQSLLGDKRVNETITNVVIPTFDIKLLQPITFSRFDAQIDVSKNALLSDVCISTSAAPT 219

Query: 667 YLPGHYFETKDSNGDIQTFNLVDGGVAASNP 759
           YLPGH F+TKD +G  + FNLVDGGVAA+NP
Sbjct: 220 YLPGHRFQTKDKDGKPREFNLVDGGVAANNP 250


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