BLASTX nr result

ID: Coptis21_contig00014630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014630
         (1163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263124.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-...   391   e-106
emb|CAN69444.1| hypothetical protein VITISV_016474 [Vitis vinifera]   391   e-106
ref|XP_002528538.1| Gibberellin 3-beta-dioxygenase, putative [Ri...   379   e-102
ref|XP_002298993.1| 2-oxoglutarate-dependent dioxygenase [Populu...   374   e-101
ref|XP_002317640.1| 2-oxoglutarate-dependent dioxygenase [Populu...   372   e-100

>ref|XP_002263124.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-like [Vitis vinifera]
          Length = 298

 Score =  391 bits (1005), Expect = e-106
 Identities = 189/289 (65%), Positives = 233/289 (80%)
 Frame = -3

Query: 1119 IPVIDLDDFPNQAEKLVSACKEWGSFRIINHKVPLTLMSDMKRVVKSLFDVPVEIKKRNT 940
            IP ID+ DFP Q  +L  AC+EWG FR++NH +P +L+S+MK VV SL D+P+E+K+RNT
Sbjct: 6    IPSIDMQDFPRQFRRLREACEEWGCFRVVNHSIPPSLLSEMKSVVGSLLDLPLEVKRRNT 65

Query: 939  DVIAGSGYVAPNKDNPLYEALGLYDLGSSQAVQEFCNQLEVSTDQRDTIMVYASALHNLM 760
            DVIAGSGY+AP+K NPLYEALGLYD+ S QAV  FC+QL+ S  QR+TI +YA A+  L 
Sbjct: 66   DVIAGSGYMAPSKVNPLYEALGLYDMASHQAVDAFCSQLDASPHQRETIKIYAKAVQELA 125

Query: 759  TEVWSKLAESMGVGSDSVKEWKCQFRINKYNFTHETIGSTGVCIHTDSSFLTILQEDECV 580
             ++ +KLAE+MG+G D  KEW CQFRINKYNFT ET+GS GV IHTDSSFLTILQ+DE V
Sbjct: 126  MDIGNKLAETMGLGGDLFKEWPCQFRINKYNFTPETVGSPGVQIHTDSSFLTILQDDENV 185

Query: 579  GGLEVMPISSLSFVPVDPLPGSLLVNLGDMATLWSNGTLYNVKHRVQCKDAALRFSIAMF 400
            GGLEVM  S  +FV VDP+PG+LLVNLGD+AT+WSNG L NVKHRVQCK+AA+R SIA F
Sbjct: 186  GGLEVMDKSG-AFVAVDPMPGTLLVNLGDIATVWSNGRLCNVKHRVQCKEAAVRLSIASF 244

Query: 399  LLGPKDKLVKAPPEFIDADHPQLYAPFTFIDLRKLRLSSGSRAGEVLDL 253
            LLGPKD  V+APPE +D++HP+L+ P T+ D RKLRLS+  +AGE L L
Sbjct: 245  LLGPKDAAVEAPPELVDSEHPRLFVPVTYEDYRKLRLSTKLQAGEALAL 293


>emb|CAN69444.1| hypothetical protein VITISV_016474 [Vitis vinifera]
          Length = 296

 Score =  391 bits (1005), Expect = e-106
 Identities = 189/289 (65%), Positives = 233/289 (80%)
 Frame = -3

Query: 1119 IPVIDLDDFPNQAEKLVSACKEWGSFRIINHKVPLTLMSDMKRVVKSLFDVPVEIKKRNT 940
            IP ID+ DFP Q  +L  AC+EWG FR++NH +P +L+S+MK VV SL D+P+E+K+RNT
Sbjct: 6    IPSIDMQDFPRQFRRLREACEEWGCFRVVNHSIPPSLLSEMKSVVGSLLDLPLEVKRRNT 65

Query: 939  DVIAGSGYVAPNKDNPLYEALGLYDLGSSQAVQEFCNQLEVSTDQRDTIMVYASALHNLM 760
            DVIAGSGY+AP+K NPLYEALGLYD+ S QAV  FC+QL+ S  QR+TI +YA A+  L 
Sbjct: 66   DVIAGSGYMAPSKVNPLYEALGLYDMASHQAVDAFCSQLDASPHQRETIKIYAKAVQELA 125

Query: 759  TEVWSKLAESMGVGSDSVKEWKCQFRINKYNFTHETIGSTGVCIHTDSSFLTILQEDECV 580
             ++ +KLAE+MG+G D  KEW CQFRINKYNFT ET+GS GV IHTDSSFLTILQ+DE V
Sbjct: 126  MDIGNKLAETMGLGGDLFKEWPCQFRINKYNFTPETVGSPGVQIHTDSSFLTILQDDENV 185

Query: 579  GGLEVMPISSLSFVPVDPLPGSLLVNLGDMATLWSNGTLYNVKHRVQCKDAALRFSIAMF 400
            GGLEVM  S  +FV VDP+PG+LLVNLGD+AT+WSNG L NVKHRVQCK+AA+R SIA F
Sbjct: 186  GGLEVMDKSG-AFVAVDPMPGTLLVNLGDIATVWSNGRLCNVKHRVQCKEAAVRLSIASF 244

Query: 399  LLGPKDKLVKAPPEFIDADHPQLYAPFTFIDLRKLRLSSGSRAGEVLDL 253
            LLGPKD  V+APPE +D++HP+L+ P T+ D RKLRLS+  +AGE L L
Sbjct: 245  LLGPKDAAVEAPPELVDSEHPRLFVPVTYEDYRKLRLSTKLQAGEALAL 293


>ref|XP_002528538.1| Gibberellin 3-beta-dioxygenase, putative [Ricinus communis]
            gi|223532040|gb|EEF33850.1| Gibberellin
            3-beta-dioxygenase, putative [Ricinus communis]
          Length = 306

 Score =  379 bits (972), Expect = e-102
 Identities = 188/294 (63%), Positives = 231/294 (78%), Gaps = 1/294 (0%)
 Frame = -3

Query: 1131 EGMMIPVIDLDDFPNQAEKLVSACKEWGSFRIINHKVPLTLMSDMKRVVKSLFDVPVEIK 952
            E  ++P ID+ DFP + E+L  AC+EWG FR +NH +P  LMS+MK+VV+SL D+P+E+K
Sbjct: 2    EKTVVPTIDVSDFPGEYERLRKACEEWGCFRAVNHNIPSALMSEMKKVVRSLLDLPMEVK 61

Query: 951  KRNTDVIAGSGYVAPNKDNPLYEALGLYDLGSSQAVQEFCNQLEVSTDQRDTIMVYASAL 772
             RN+DVIAGSGY+AP+  NPLYEALGLYD+GSSQAV  FC+Q++ S  QR+ I  YA A+
Sbjct: 62   VRNSDVIAGSGYMAPSPVNPLYEALGLYDIGSSQAVHTFCSQVDASPHQREVISNYAKAI 121

Query: 771  HNLMTEVWSKLAESMGVGSDSVKE-WKCQFRINKYNFTHETIGSTGVCIHTDSSFLTILQ 595
            H L  ++  KLA+SMG+ S+ + E W  QFRINKYNFT ET+GS+GV IHTDS FLTILQ
Sbjct: 122  HELSMDLAWKLAQSMGLLSNDLFEGWPSQFRINKYNFTSETVGSSGVQIHTDSGFLTILQ 181

Query: 594  EDECVGGLEVMPISSLSFVPVDPLPGSLLVNLGDMATLWSNGTLYNVKHRVQCKDAALRF 415
            +DE VGGLEVM  S  +FV VDPLPG+LLVNLGD+AT WSNG L NVKHRVQCK AA+R 
Sbjct: 182  DDEDVGGLEVMDRSG-AFVAVDPLPGTLLVNLGDVATAWSNGRLCNVKHRVQCKQAAVRI 240

Query: 414  SIAMFLLGPKDKLVKAPPEFIDADHPQLYAPFTFIDLRKLRLSSGSRAGEVLDL 253
            SIA FLLGPKD  V+APPE +D+ HP+LY PFTF D RKLRL +  +AGE L+L
Sbjct: 241  SIASFLLGPKDSAVEAPPELVDSQHPRLYIPFTFQDYRKLRLRTKFQAGEALEL 294


>ref|XP_002298993.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
            gi|222846251|gb|EEE83798.1| 2-oxoglutarate-dependent
            dioxygenase [Populus trichocarpa]
          Length = 297

 Score =  374 bits (961), Expect = e-101
 Identities = 183/296 (61%), Positives = 234/296 (79%)
 Frame = -3

Query: 1140 MGEEGMMIPVIDLDDFPNQAEKLVSACKEWGSFRIINHKVPLTLMSDMKRVVKSLFDVPV 961
            MGE G  +P IDL +FP Q EKL  AC+EWG FR++NH + L LM+DMKRVV+SL D+P 
Sbjct: 1    MGESG--VPTIDLQEFPGQYEKLRRACEEWGCFRLVNHNISLALMADMKRVVRSLLDLPF 58

Query: 960  EIKKRNTDVIAGSGYVAPNKDNPLYEALGLYDLGSSQAVQEFCNQLEVSTDQRDTIMVYA 781
            ++KKRN DVI+GSGY+AP++ NPLYEALGLYD+GSSQAV+ FC+QL+ S+ QR+ I +YA
Sbjct: 59   DVKKRNLDVISGSGYMAPSQVNPLYEALGLYDMGSSQAVETFCSQLDASSYQREVIEMYA 118

Query: 780  SALHNLMTEVWSKLAESMGVGSDSVKEWKCQFRINKYNFTHETIGSTGVCIHTDSSFLTI 601
             A+H +  +V  KLAES+G+  D  + W CQFRINKYNFT ETIGS+GV IHTDS FLTI
Sbjct: 119  KAIHGVAKDVARKLAESLGLSGDFFESWVCQFRINKYNFTPETIGSSGVQIHTDSGFLTI 178

Query: 600  LQEDECVGGLEVMPISSLSFVPVDPLPGSLLVNLGDMATLWSNGTLYNVKHRVQCKDAAL 421
            LQ+D+ VGGLEVM  S + +V VDP+PG+LL+NLGD+A  WSNG   NV+HRVQCK+A +
Sbjct: 179  LQDDKNVGGLEVMNPSGV-YVAVDPVPGTLLINLGDIAKAWSNGRFRNVQHRVQCKEATI 237

Query: 420  RFSIAMFLLGPKDKLVKAPPEFIDADHPQLYAPFTFIDLRKLRLSSGSRAGEVLDL 253
            R SIA FLL   D+ V+APPE +D++HP+LY PFT+ D RKLRL++  +AGE L+L
Sbjct: 238  RISIASFLLA-SDEEVEAPPELVDSEHPRLYVPFTYEDYRKLRLTTKLQAGEALEL 292


>ref|XP_002317640.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
            gi|222860705|gb|EEE98252.1| 2-oxoglutarate-dependent
            dioxygenase [Populus trichocarpa]
          Length = 297

 Score =  372 bits (955), Expect = e-100
 Identities = 185/296 (62%), Positives = 231/296 (78%)
 Frame = -3

Query: 1140 MGEEGMMIPVIDLDDFPNQAEKLVSACKEWGSFRIINHKVPLTLMSDMKRVVKSLFDVPV 961
            MG+ G  +P+IDL +FP Q EKL  AC EWG FRI+NH + L LM+DMKRVV+SL D+P 
Sbjct: 1    MGKSG--VPIIDLHEFPGQYEKLRRACVEWGCFRIVNHNISLALMADMKRVVRSLLDLPF 58

Query: 960  EIKKRNTDVIAGSGYVAPNKDNPLYEALGLYDLGSSQAVQEFCNQLEVSTDQRDTIMVYA 781
            ++KKRN DVIAGSGY+AP+K NPLYEALGLYD+ SSQAV+ FC+Q++ S  QR+ I +YA
Sbjct: 59   DVKKRNIDVIAGSGYMAPSKVNPLYEALGLYDMRSSQAVETFCSQMDASPYQREVIEMYA 118

Query: 780  SALHNLMTEVWSKLAESMGVGSDSVKEWKCQFRINKYNFTHETIGSTGVCIHTDSSFLTI 601
             A+H    ++  KLAESMG+  D  + W  QFRINKY+FT ETIGS+GV IHTDS FLTI
Sbjct: 119  KAIHGAAMDIARKLAESMGLNGDLFESWISQFRINKYSFTPETIGSSGVQIHTDSGFLTI 178

Query: 600  LQEDECVGGLEVMPISSLSFVPVDPLPGSLLVNLGDMATLWSNGTLYNVKHRVQCKDAAL 421
            LQ+DE VGGLEVM  S + F  VDP PG+LLVNLGD+AT WSNG L NV+HRVQCK+A +
Sbjct: 179  LQDDENVGGLEVMDPSGV-FAAVDPSPGTLLVNLGDVATAWSNGGLRNVQHRVQCKEATI 237

Query: 420  RFSIAMFLLGPKDKLVKAPPEFIDADHPQLYAPFTFIDLRKLRLSSGSRAGEVLDL 253
            R SIA FL+GPKD+ V+APPE +D++HP+L+ PF + D RKLRL++   AGE L+L
Sbjct: 238  RISIASFLVGPKDE-VEAPPELVDSEHPRLFVPFKYEDYRKLRLTTKLEAGEALEL 292


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