BLASTX nr result

ID: Coptis21_contig00014628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00014628
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517620.1| conserved hypothetical protein [Ricinus comm...   201   2e-49
ref|XP_002269799.1| PREDICTED: uncharacterized protein LOC100258...   201   2e-49
ref|XP_003597888.1| Embryo-specific protein-like protein [Medica...   195   1e-47
gb|AFK42533.1| unknown [Lotus japonicus]                              194   2e-47
ref|XP_002524493.1| conserved hypothetical protein [Ricinus comm...   192   1e-46

>ref|XP_002517620.1| conserved hypothetical protein [Ricinus communis]
           gi|223543252|gb|EEF44784.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 163

 Score =  201 bits (511), Expect = 2e-49
 Identities = 101/159 (63%), Positives = 120/159 (75%)
 Frame = -2

Query: 802 KSVQILVFLTSLFFIISQAKSIITQQPQPLKNSLQIKNTTSTTPNACSYTVKIKTSCSST 623
           K+V  L+FL +L   +S A+SII   PQPLK+    K   +   N+CSYTVKI TSCSST
Sbjct: 5   KAVTFLLFL-ALIVTLSNARSIIPL-PQPLKS---FKINATQNANSCSYTVKITTSCSST 59

Query: 622 SFTRDQIGLAFGDAYGSQVYAPRLDDPSSRTFERCSTDTFQISGPCMRYKICYIYLLRMG 443
            +TRDQI LAFGDAYG+QVYAPRLDDP S TFE CSTDTFQI GPC  Y+ICY+YL R G
Sbjct: 60  RYTRDQISLAFGDAYGNQVYAPRLDDPYSATFESCSTDTFQIKGPC-TYQICYVYLYRSG 118

Query: 442 SDGWKPDSVKIYDRNSQAVTFNYNTFIPYGVWFGFDFCN 326
            DGWKP +V +Y   +++VTF YNTFIP GVWFGF++CN
Sbjct: 119 YDGWKPKTVTVYGYYTKSVTFTYNTFIPNGVWFGFNYCN 157


>ref|XP_002269799.1| PREDICTED: uncharacterized protein LOC100258419 [Vitis vinifera]
           gi|296084101|emb|CBI24489.3| unnamed protein product
           [Vitis vinifera]
          Length = 191

 Score =  201 bits (510), Expect = 2e-49
 Identities = 98/154 (63%), Positives = 119/154 (77%)
 Frame = -2

Query: 790 ILVFLTSLFFIISQAKSIITQQPQPLKNSLQIKNTTSTTPNACSYTVKIKTSCSSTSFTR 611
           +L+  ++  FI SQA+SI++Q PQ LK+      T      +CS+TV IKTSCSS SFTR
Sbjct: 13  LLLLHSASIFIFSQAQSIVSQ-PQVLKSK---DFTNIQNVGSCSFTVVIKTSCSSVSFTR 68

Query: 610 DQIGLAFGDAYGSQVYAPRLDDPSSRTFERCSTDTFQISGPCMRYKICYIYLLRMGSDGW 431
           DQI LAFGDAYG+QVYAPR+DDPS+RTFERCSTDTFQI+GPC  Y++C++ L R G DGW
Sbjct: 69  DQISLAFGDAYGNQVYAPRIDDPSTRTFERCSTDTFQINGPC-TYQVCHVALYRSGMDGW 127

Query: 430 KPDSVKIYDRNSQAVTFNYNTFIPYGVWFGFDFC 329
           KP+SVKIY  NS  VTF YN F+P GVWFGFD+C
Sbjct: 128 KPESVKIYGYNSSPVTFYYNAFVPSGVWFGFDYC 161


>ref|XP_003597888.1| Embryo-specific protein-like protein [Medicago truncatula]
           gi|87162930|gb|ABD28725.1| Embryo-specific 3 [Medicago
           truncatula] gi|355486936|gb|AES68139.1| Embryo-specific
           protein-like protein [Medicago truncatula]
           gi|388503498|gb|AFK39815.1| unknown [Medicago
           truncatula]
          Length = 179

 Score =  195 bits (495), Expect = 1e-47
 Identities = 96/163 (58%), Positives = 112/163 (68%), Gaps = 1/163 (0%)
 Frame = -2

Query: 814 KNTMKSVQILVFLTSLFFIISQAKSI-ITQQPQPLKNSLQIKNTTSTTPNACSYTVKIKT 638
           K+   S+  L F   +  + SQA  I IT  PQP   S +   T     N+CSYTV I T
Sbjct: 2   KSVTSSILFLFFTFCIIIVFSQASPITITDYPQP-NLSFKPNQTQHHQSNSCSYTVTITT 60

Query: 637 SCSSTSFTRDQIGLAFGDAYGSQVYAPRLDDPSSRTFERCSTDTFQISGPCMRYKICYIY 458
           SC+S SFTRD+I L+FGDAYG QVY P+LDDPSSRTFERCSTDTF I+GPC  Y ICY+Y
Sbjct: 61  SCNSPSFTRDRISLSFGDAYGYQVYVPKLDDPSSRTFERCSTDTFNINGPC-TYPICYLY 119

Query: 457 LLRMGSDGWKPDSVKIYDRNSQAVTFNYNTFIPYGVWFGFDFC 329
           L R G DGWKP+SV +Y  N Q  TF YN FIP GVW+GFD+C
Sbjct: 120 LYRSGYDGWKPESVTVYTHNYQPATFYYNAFIPNGVWYGFDYC 162


>gb|AFK42533.1| unknown [Lotus japonicus]
          Length = 166

 Score =  194 bits (493), Expect = 2e-47
 Identities = 96/154 (62%), Positives = 112/154 (72%), Gaps = 1/154 (0%)
 Frame = -2

Query: 787 LVFLTSLFFIISQAKSIITQQPQPLKNSLQIKNTTSTTPNA-CSYTVKIKTSCSSTSFTR 611
           L+   S+  + SQA  ++T  PQP  N     N T    NA CSYTV I+TSCSS S+TR
Sbjct: 6   LILTFSIISVFSQATLLLTDPPQP--NESFKPNLTQHQQNAGCSYTVTIRTSCSSPSYTR 63

Query: 610 DQIGLAFGDAYGSQVYAPRLDDPSSRTFERCSTDTFQISGPCMRYKICYIYLLRMGSDGW 431
           D+I L+FGDAYG QVY PRLDDPSSRTFERCSTDTFQI+GPC  Y+ICY+YL R G DGW
Sbjct: 64  DRISLSFGDAYGYQVYVPRLDDPSSRTFERCSTDTFQINGPC-TYQICYLYLYRSGYDGW 122

Query: 430 KPDSVKIYDRNSQAVTFNYNTFIPYGVWFGFDFC 329
            P+SV +   NSQ VTF YN FIP G+WFGFD+C
Sbjct: 123 IPESVTVSGYNSQPVTFYYNAFIPAGIWFGFDYC 156


>ref|XP_002524493.1| conserved hypothetical protein [Ricinus communis]
           gi|223536281|gb|EEF37933.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 167

 Score =  192 bits (487), Expect = 1e-46
 Identities = 93/158 (58%), Positives = 117/158 (74%), Gaps = 2/158 (1%)
 Frame = -2

Query: 796 VQILVFLTS-LFFIISQAKSIITQQPQP-LKNSLQIKNTTSTTPNACSYTVKIKTSCSST 623
           V++L FL   +FF I    +     PQP L NS   K+  +    +CSYTV +KTSCSS+
Sbjct: 2   VKLLSFLLIFVFFSIISPPATSVSPPQPHLLNSFPPKSIQAANARSCSYTVVVKTSCSSS 61

Query: 622 SFTRDQIGLAFGDAYGSQVYAPRLDDPSSRTFERCSTDTFQISGPCMRYKICYIYLLRMG 443
           S+TRD+I LAFGD+YG++VY  RLDDPSS TF+RCS+DTFQISGPC  Y ICY+YLLR G
Sbjct: 62  SYTRDKISLAFGDSYGNEVYLKRLDDPSSGTFDRCSSDTFQISGPC-TYGICYLYLLRRG 120

Query: 442 SDGWKPDSVKIYDRNSQAVTFNYNTFIPYGVWFGFDFC 329
           SDGWKP+SVKIY  N++ + F YNTF+P GVW+GF+ C
Sbjct: 121 SDGWKPESVKIYGPNTKTINFKYNTFLPNGVWYGFNLC 158


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